Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
ABCA4P78363 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.07□□□□□ -2.24
ABCA4P78363 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.07□□□□□ -2.24
ABCA4P78363 AC016716.1-201ENST00000265882 708 ntBASIC1.07□□□□□ -2.24
ABCA4P78363 RNU6-234P-201ENST00000365229 104 ntBASIC1.07□□□□□ -2.24
ABCA4P78363 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
ABCA4P78363 VN1R36P-201ENST00000414936 291 ntBASIC1.07□□□□□ -2.24
ABCA4P78363 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.07□□□□□ -2.24
ABCA4P78363 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.07□□□□□ -2.24
ABCA4P78363 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.07□□□□□ -2.24
ABCA4P78363 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.07□□□□□ -2.24
ABCA4P78363 AC004865.1-201ENST00000442276 1003 ntBASIC1.07□□□□□ -2.24
ABCA4P78363 MTND1P33-201ENST00000446251 917 ntBASIC1.07□□□□□ -2.24
ABCA4P78363 AC104073.1-201ENST00000451988 151 ntBASIC1.07□□□□□ -2.24
ABCA4P78363 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.07□□□□□ -2.24
ABCA4P78363 AC093770.1-201ENST00000511559 571 ntBASIC1.07□□□□□ -2.24
ABCA4P78363 RNU6-202P-201ENST00000515998 96 ntBASIC1.07□□□□□ -2.24
ABCA4P78363 RNU6-113P-201ENST00000516653 101 ntBASIC1.07□□□□□ -2.24
ABCA4P78363 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC1.07□□□□□ -2.24
ABCA4P78363 AL121821.2-201ENST00000556081 394 ntBASIC1.07□□□□□ -2.24
ABCA4P78363 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.07□□□□□ -2.24
ABCA4P78363 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
ABCA4P78363 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.07□□□□□ -2.24
ABCA4P78363 AC105245.1-201ENST00000581934 244 ntBASIC1.07□□□□□ -2.24
ABCA4P78363 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.07□□□□□ -2.24
ABCA4P78363 AL021997.1-201ENST00000605757 193 ntBASIC1.07□□□□□ -2.24
ABCA4P78363 MIR98-201ENST00000606724 119 ntBASIC1.07□□□□□ -2.24
ABCA4P78363 AC096772.1-201ENST00000609146 564 ntBASIC1.07□□□□□ -2.24
ABCA4P78363 MIR7974-201ENST00000615835 79 ntBASIC1.07□□□□□ -2.24
ABCA4P78363 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
ABCA4P78363 AL049641.1-201ENST00000441055 1948 ntBASIC1.07□□□□□ -2.24
ABCA4P78363 AP000560.1-201ENST00000624150 1937 ntBASIC1.07□□□□□ -2.24
ABCA4P78363 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.07□□□□□ -2.24
ABCA4P78363 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.07□□□□□ -2.24
ABCA4P78363 SNORA16B-201ENST00000364674 135 ntBASIC1.06□□□□□ -2.24
ABCA4P78363 AC023141.4-201ENST00000412031 328 ntBASIC1.06□□□□□ -2.24
ABCA4P78363 CYCSP33-201ENST00000414485 327 ntBASIC1.06□□□□□ -2.24
ABCA4P78363 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.06□□□□□ -2.24
ABCA4P78363 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.06□□□□□ -2.24
ABCA4P78363 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.06□□□□□ -2.24
ABCA4P78363 AL512661.1-201ENST00000434586 1253 ntBASIC1.06□□□□□ -2.24
ABCA4P78363 RPS29P23-201ENST00000458635 123 ntBASIC1.06□□□□□ -2.24
ABCA4P78363 BZW1P2-201ENST00000473537 826 ntBASIC1.06□□□□□ -2.24
ABCA4P78363 AC027575.1-201ENST00000481064 460 ntBASIC1.06□□□□□ -2.24
ABCA4P78363 ZNF705CP-201ENST00000530515 889 ntBASIC1.06□□□□□ -2.24
ABCA4P78363 AC115989.2-201ENST00000578640 563 ntBASIC1.06□□□□□ -2.24
ABCA4P78363 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.06□□□□□ -2.24
ABCA4P78363 U6.107-201ENST00000637108 79 ntBASIC1.06□□□□□ -2.24
ABCA4P78363 AP003399.1-201ENST00000637534 361 ntBASIC1.06□□□□□ -2.24
ABCA4P78363 MTND5P30-201ENST00000452896 1731 ntBASIC1.06□□□□□ -2.24
ABCA4P78363 RNU1-133P-201ENST00000364867 167 ntBASIC1.06□□□□□ -2.24
ABCA4P78363 MIR520E-201ENST00000384867 87 ntBASIC1.06□□□□□ -2.24
ABCA4P78363 ZNF90P2-204ENST00000419323 1075 ntBASIC1.06□□□□□ -2.24
ABCA4P78363 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC1.06□□□□□ -2.24
ABCA4P78363 EIF4EP4-201ENST00000424916 578 ntBASIC1.06□□□□□ -2.24
ABCA4P78363 GTF2IP20-201ENST00000431663 360 ntBASIC1.06□□□□□ -2.24
ABCA4P78363 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.06□□□□□ -2.24
ABCA4P78363 AL078601.1-201ENST00000444542 271 ntBASIC1.06□□□□□ -2.24
ABCA4P78363 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.06□□□□□ -2.24
ABCA4P78363 AC087854.1-201ENST00000519706 414 ntBASIC1.06□□□□□ -2.24
ABCA4P78363 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.06□□□□□ -2.24
ABCA4P78363 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.06□□□□□ -2.24
ABCA4P78363 AGGF1P5-201ENST00000567900 919 ntBASIC1.06□□□□□ -2.24
ABCA4P78363 HMGN2P15-201ENST00000585707 270 ntBASIC1.06□□□□□ -2.24
ABCA4P78363 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.06□□□□□ -2.24
ABCA4P78363 AL096840.1-201ENST00000603287 93 ntBASIC1.06□□□□□ -2.24
ABCA4P78363 MIR6788-201ENST00000618842 66 ntBASIC1.06□□□□□ -2.24
ABCA4P78363 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
ABCA4P78363 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
ABCA4P78363 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
ABCA4P78363 Y_RNA.303-201ENST00000364998 94 ntBASIC1.05□□□□□ -2.24
ABCA4P78363 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
ABCA4P78363 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.05□□□□□ -2.24
ABCA4P78363 MIR325-201ENST00000385260 98 ntBASIC1.05□□□□□ -2.24
ABCA4P78363 AL445305.1-201ENST00000432577 575 ntBASIC1.05□□□□□ -2.24
ABCA4P78363 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC1.05□□□□□ -2.24
ABCA4P78363 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.05□□□□□ -2.24
ABCA4P78363 DYNLL1P5-201ENST00000467158 270 ntBASIC1.05□□□□□ -2.24
ABCA4P78363 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
ABCA4P78363 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.05□□□□□ -2.24
ABCA4P78363 AC007151.1-201ENST00000572774 483 ntBASIC1.05□□□□□ -2.24
ABCA4P78363 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.05□□□□□ -2.24
ABCA4P78363 7SK.7-201ENST00000603504 247 ntBASIC1.05□□□□□ -2.24
ABCA4P78363 AC103710.4-201ENST00000609301 899 ntBASIC1.05□□□□□ -2.24
ABCA4P78363 AL627230.6-201ENST00000611129 280 ntBASIC1.05□□□□□ -2.24
ABCA4P78363 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.05□□□□□ -2.24
ABCA4P78363 LINC02211-204ENST00000642024 1070 ntBASIC1.05□□□□□ -2.24
ABCA4P78363 TEX21P-201ENST00000447107 1476 ntBASIC1.05□□□□□ -2.24
ABCA4P78363 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
ABCA4P78363 RNU6-1155P-201ENST00000363554 107 ntBASIC1.05□□□□□ -2.24
ABCA4P78363 SNORA70.7-201ENST00000384159 133 ntBASIC1.05□□□□□ -2.24
ABCA4P78363 RNU6-882P-201ENST00000391025 103 ntBASIC1.05□□□□□ -2.24
ABCA4P78363 MIR1290-201ENST00000408735 78 ntBASIC1.05□□□□□ -2.24
ABCA4P78363 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.05□□□□□ -2.24
ABCA4P78363 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.05□□□□□ -2.24
ABCA4P78363 RPS24P7-201ENST00000416921 246 ntBASIC1.05□□□□□ -2.24
ABCA4P78363 AC074117.2-201ENST00000417130 397 ntBASIC1.05□□□□□ -2.24
ABCA4P78363 AC005534.2-201ENST00000431047 433 ntBASIC1.05□□□□□ -2.24
ABCA4P78363 AC092573.2-201ENST00000434546 243 ntBASIC1.05□□□□□ -2.24
ABCA4P78363 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms