Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.44□□□□□ -2.18
AP3S2P59780 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.44□□□□□ -2.18
AP3S2P59780 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.44□□□□□ -2.18
AP3S2P59780 LARP7P3-201ENST00000579888 337 ntBASIC1.44□□□□□ -2.18
AP3S2P59780 UBE2L4-201ENST00000587688 464 ntBASIC1.44□□□□□ -2.18
AP3S2P59780 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.44□□□□□ -2.18
AP3S2P59780 AC016925.2-201ENST00000605108 242 ntBASIC1.44□□□□□ -2.18
AP3S2P59780 AL139344.1-201ENST00000605228 195 ntBASIC1.44□□□□□ -2.18
AP3S2P59780 uc_338.5-201ENST00000611839 155 ntBASIC1.44□□□□□ -2.18
AP3S2P59780 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC1.44□□□□□ -2.18
AP3S2P59780 AC008121.3-201ENST00000618726 433 ntBASIC1.44□□□□□ -2.18
AP3S2P59780 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.44□□□□□ -2.18
AP3S2P59780 AL118508.4-201ENST00000624142 1176 ntBASIC1.44□□□□□ -2.18
AP3S2P59780 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
AP3S2P59780 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.43□□□□□ -2.18
AP3S2P59780 SNRPEP3-201ENST00000338402 276 ntBASIC1.43□□□□□ -2.18
AP3S2P59780 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
AP3S2P59780 SNORA48.2-201ENST00000390926 124 ntBASIC1.43□□□□□ -2.18
AP3S2P59780 RNA5SP465-201ENST00000391195 109 ntBASIC1.43□□□□□ -2.18
AP3S2P59780 AC068050.1-201ENST00000394891 380 ntBASIC1.43□□□□□ -2.18
AP3S2P59780 DHFRP6-201ENST00000401776 268 ntBASIC1.43□□□□□ -2.18
AP3S2P59780 RNU6-955P-201ENST00000410497 104 ntBASIC1.43□□□□□ -2.18
AP3S2P59780 AC078974.1-201ENST00000411597 223 ntBASIC1.43□□□□□ -2.18
AP3S2P59780 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.43□□□□□ -2.18
AP3S2P59780 AL645568.3-201ENST00000433683 316 ntBASIC1.43□□□□□ -2.18
AP3S2P59780 USP9YP24-201ENST00000434374 697 ntBASIC1.43□□□□□ -2.18
AP3S2P59780 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.43□□□□□ -2.18
AP3S2P59780 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.43□□□□□ -2.18
AP3S2P59780 AL353706.1-201ENST00000436728 494 ntBASIC1.43□□□□□ -2.18
AP3S2P59780 AL360221.1-201ENST00000445989 335 ntBASIC1.43□□□□□ -2.18
AP3S2P59780 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.43□□□□□ -2.18
AP3S2P59780 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.43□□□□□ -2.18
AP3S2P59780 AC009097.3-201ENST00000563557 1018 ntBASIC1.43□□□□□ -2.18
AP3S2P59780 MIR1273D-201ENST00000577266 86 ntBASIC1.43□□□□□ -2.18
AP3S2P59780 AP001542.2-201ENST00000593141 364 ntBASIC1.43□□□□□ -2.18
AP3S2P59780 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.43□□□□□ -2.18
AP3S2P59780 AL033523.1-201ENST00000605153 153 ntBASIC1.43□□□□□ -2.18
AP3S2P59780 AC099842.1-201ENST00000619919 596 ntBASIC1.43□□□□□ -2.18
AP3S2P59780 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
AP3S2P59780 AC092881.1-201ENST00000638218 2733 ntBASIC1.42□□□□□ -2.18
AP3S2P59780 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.42□□□□□ -2.18
AP3S2P59780 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
AP3S2P59780 SNORA67.3-201ENST00000384366 140 ntBASIC1.42□□□□□ -2.18
AP3S2P59780 RNU2-2P-201ENST00000410396 191 ntBASIC1.42□□□□□ -2.18
AP3S2P59780 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.42□□□□□ -2.18
AP3S2P59780 TRIM60P13-201ENST00000432350 1283 ntBASIC1.42□□□□□ -2.18
AP3S2P59780 AL512661.1-201ENST00000434586 1253 ntBASIC1.42□□□□□ -2.18
AP3S2P59780 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.42□□□□□ -2.18
AP3S2P59780 MTND1P9-201ENST00000453775 944 ntBASIC1.42□□□□□ -2.18
AP3S2P59780 RNA5SP57-201ENST00000459463 123 ntBASIC1.42□□□□□ -2.18
AP3S2P59780 AC004924.1-201ENST00000480160 781 ntBASIC1.42□□□□□ -2.18
AP3S2P59780 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.42□□□□□ -2.18
AP3S2P59780 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.42□□□□□ -2.18
AP3S2P59780 AC084851.1-201ENST00000529105 249 ntBASIC1.42□□□□□ -2.18
AP3S2P59780 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.42□□□□□ -2.18
AP3S2P59780 AC012213.3-201ENST00000577199 777 ntBASIC1.42□□□□□ -2.18
AP3S2P59780 RPAP2P1-201ENST00000603626 1168 ntBASIC1.42□□□□□ -2.18
AP3S2P59780 AC068944.2-201ENST00000610373 403 ntBASIC1.42□□□□□ -2.18
AP3S2P59780 U2.15-201ENST00000611544 191 ntBASIC1.42□□□□□ -2.18
AP3S2P59780 U2.16-201ENST00000613119 191 ntBASIC1.42□□□□□ -2.18
AP3S2P59780 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
AP3S2P59780 U2.12-201ENST00000613778 191 ntBASIC1.42□□□□□ -2.18
AP3S2P59780 U2.20-201ENST00000613956 192 ntBASIC1.42□□□□□ -2.18
AP3S2P59780 U2.9-201ENST00000615427 191 ntBASIC1.42□□□□□ -2.18
AP3S2P59780 U2.11-201ENST00000616345 191 ntBASIC1.42□□□□□ -2.18
AP3S2P59780 U2.2-201ENST00000616535 191 ntBASIC1.42□□□□□ -2.18
AP3S2P59780 U2.3-201ENST00000617785 191 ntBASIC1.42□□□□□ -2.18
AP3S2P59780 U2.19-201ENST00000618602 191 ntBASIC1.42□□□□□ -2.18
AP3S2P59780 RNU2-1-201ENST00000618664 191 ntBASIC1.42□□□□□ -2.18
AP3S2P59780 U2.6-201ENST00000619225 191 ntBASIC1.42□□□□□ -2.18
AP3S2P59780 U2.5-201ENST00000619465 191 ntBASIC1.42□□□□□ -2.18
AP3S2P59780 U2.10-201ENST00000620268 191 ntBASIC1.42□□□□□ -2.18
AP3S2P59780 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.42□□□□□ -2.18
AP3S2P59780 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
AP3S2P59780 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
AP3S2P59780 RNU5E-1-201ENST00000362477 120 ntBASIC1.41□□□□□ -2.18
AP3S2P59780 SNORA5B-201ENST00000363786 132 ntBASIC1.41□□□□□ -2.18
AP3S2P59780 RNU6-359P-201ENST00000365466 108 ntBASIC1.41□□□□□ -2.18
AP3S2P59780 RNU6-338P-201ENST00000383888 105 ntBASIC1.41□□□□□ -2.18
AP3S2P59780 MIR30A-201ENST00000385092 71 ntBASIC1.41□□□□□ -2.18
AP3S2P59780 USP9YP22-201ENST00000438971 294 ntBASIC1.41□□□□□ -2.18
AP3S2P59780 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
AP3S2P59780 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.41□□□□□ -2.18
AP3S2P59780 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.41□□□□□ -2.18
AP3S2P59780 SETP6-201ENST00000479329 568 ntBASIC1.41□□□□□ -2.18
AP3S2P59780 AC023790.1-201ENST00000482174 347 ntBASIC1.41□□□□□ -2.18
AP3S2P59780 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.41□□□□□ -2.18
AP3S2P59780 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.41□□□□□ -2.18
AP3S2P59780 AC114781.4-201ENST00000513707 639 ntBASIC1.41□□□□□ -2.18
AP3S2P59780 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.41□□□□□ -2.18
AP3S2P59780 AC079598.5-201ENST00000547460 117 ntBASIC1.41□□□□□ -2.18
AP3S2P59780 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC1.41□□□□□ -2.18
AP3S2P59780 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.41□□□□□ -2.18
AP3S2P59780 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.41□□□□□ -2.18
AP3S2P59780 AL713866.2-201ENST00000603579 219 ntBASIC1.41□□□□□ -2.18
AP3S2P59780 AC018638.7-201ENST00000605836 1114 ntBASIC1.41□□□□□ -2.18
AP3S2P59780 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.41□□□□□ -2.18
AP3S2P59780 AC009268.2-201ENST00000621925 457 ntBASIC1.41□□□□□ -2.18
AP3S2P59780 AC017037.3-201ENST00000625016 472 ntBASIC1.41□□□□□ -2.18
AP3S2P59780 AC243829.7-201ENST00000633081 225 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms