Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
CDH13P55290 RNU6-1042P-201ENST00000384204 107 ntBASIC2.94□□□□□ -1.94
CDH13P55290 SNORA24.1-201ENST00000384401 135 ntBASIC2.94□□□□□ -1.94
CDH13P55290 AC114491.1-201ENST00000416095 246 ntBASIC2.94□□□□□ -1.94
CDH13P55290 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.94□□□□□ -1.94
CDH13P55290 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.94□□□□□ -1.94
CDH13P55290 RPL7P46-201ENST00000425129 740 ntBASIC2.94□□□□□ -1.94
CDH13P55290 MTATP6P16-201ENST00000434543 526 ntBASIC2.94□□□□□ -1.94
CDH13P55290 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CDH13P55290 AC132479.1-201ENST00000449160 144 ntBASIC2.94□□□□□ -1.94
CDH13P55290 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.94□□□□□ -1.94
CDH13P55290 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.94□□□□□ -1.94
CDH13P55290 RPL26P9-201ENST00000457466 433 ntBASIC2.94□□□□□ -1.94
CDH13P55290 TPT1P7-201ENST00000458300 517 ntBASIC2.94□□□□□ -1.94
CDH13P55290 AP004217.1-201ENST00000480579 346 ntBASIC2.94□□□□□ -1.94
CDH13P55290 RPS15AP34-201ENST00000487776 387 ntBASIC2.94□□□□□ -1.94
CDH13P55290 HSPD1P15-201ENST00000505573 1122 ntBASIC2.94□□□□□ -1.94
CDH13P55290 AC109927.2-201ENST00000506416 303 ntBASIC2.94□□□□□ -1.94
CDH13P55290 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.94□□□□□ -1.94
CDH13P55290 AC108078.2-201ENST00000510750 236 ntBASIC2.94□□□□□ -1.94
CDH13P55290 Y_RNA.689-201ENST00000516589 107 ntBASIC2.94□□□□□ -1.94
CDH13P55290 RNU6-405P-201ENST00000516637 110 ntBASIC2.94□□□□□ -1.94
CDH13P55290 RNU6-914P-201ENST00000516749 109 ntBASIC2.94□□□□□ -1.94
CDH13P55290 RNU6-703P-201ENST00000516946 107 ntBASIC2.94□□□□□ -1.94
CDH13P55290 RNU6-445P-201ENST00000516949 107 ntBASIC2.94□□□□□ -1.94
CDH13P55290 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.94□□□□□ -1.94
CDH13P55290 AP003122.3-201ENST00000526316 255 ntBASIC2.94□□□□□ -1.94
CDH13P55290 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.94□□□□□ -1.94
CDH13P55290 AC084851.1-201ENST00000529105 249 ntBASIC2.94□□□□□ -1.94
CDH13P55290 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.94□□□□□ -1.94
CDH13P55290 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CDH13P55290 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.94□□□□□ -1.94
CDH13P55290 NACAP3-201ENST00000552100 481 ntBASIC2.94□□□□□ -1.94
CDH13P55290 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.94□□□□□ -1.94
CDH13P55290 MTCYBP33-201ENST00000575007 1130 ntBASIC2.94□□□□□ -1.94
CDH13P55290 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CDH13P55290 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.94□□□□□ -1.94
CDH13P55290 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.94□□□□□ -1.94
CDH13P55290 AL133393.1-201ENST00000603277 287 ntBASIC2.94□□□□□ -1.94
CDH13P55290 AL121992.2-201ENST00000606262 256 ntBASIC2.94□□□□□ -1.94
CDH13P55290 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.94□□□□□ -1.94
CDH13P55290 AC011939.3-201ENST00000613686 466 ntBASIC2.94□□□□□ -1.94
CDH13P55290 AC130324.3-201ENST00000614165 542 ntBASIC2.94□□□□□ -1.94
CDH13P55290 MIR7112-201ENST00000616126 65 ntBASIC2.94□□□□□ -1.94
CDH13P55290 AC136475.10-201ENST00000620253 385 ntBASIC2.94□□□□□ -1.94
CDH13P55290 AC084035.1-201ENST00000634543 607 ntBASIC2.94□□□□□ -1.94
CDH13P55290 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
CDH13P55290 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CDH13P55290 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
CDH13P55290 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDH13P55290 AC092435.3-201ENST00000565538 3654 ntBASIC2.94□□□□□ -1.94
CDH13P55290 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CDH13P55290 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CDH13P55290 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CDH13P55290 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CDH13P55290 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
CDH13P55290 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CDH13P55290 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CDH13P55290 RNU6-179P-201ENST00000363350 107 ntBASIC2.93□□□□□ -1.94
CDH13P55290 RNU1-73P-201ENST00000383971 164 ntBASIC2.93□□□□□ -1.94
CDH13P55290 RNU5A-6P-201ENST00000384136 116 ntBASIC2.93□□□□□ -1.94
CDH13P55290 RNU6-74P-201ENST00000384235 107 ntBASIC2.93□□□□□ -1.94
CDH13P55290 RNA5SP171-201ENST00000391071 115 ntBASIC2.93□□□□□ -1.94
CDH13P55290 RNU4-47P-201ENST00000410876 114 ntBASIC2.93□□□□□ -1.94
CDH13P55290 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.93□□□□□ -1.94
CDH13P55290 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.93□□□□□ -1.94
CDH13P55290 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.93□□□□□ -1.94
CDH13P55290 YME1L1P1-201ENST00000429435 297 ntBASIC2.93□□□□□ -1.94
CDH13P55290 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.93□□□□□ -1.94
CDH13P55290 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.93□□□□□ -1.94
CDH13P55290 AL358232.1-201ENST00000448030 501 ntBASIC2.93□□□□□ -1.94
CDH13P55290 DPPA3P1-201ENST00000448050 469 ntBASIC2.93□□□□□ -1.94
CDH13P55290 RPL37P4-201ENST00000448908 268 ntBASIC2.93□□□□□ -1.94
CDH13P55290 MTATP6P7-201ENST00000453315 681 ntBASIC2.93□□□□□ -1.94
CDH13P55290 C1DP4-201ENST00000455429 424 ntBASIC2.93□□□□□ -1.94
CDH13P55290 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.93□□□□□ -1.94
CDH13P55290 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.93□□□□□ -1.94
CDH13P55290 SNORD27.1-201ENST00000516319 72 ntBASIC2.93□□□□□ -1.94
CDH13P55290 SUB1P1-201ENST00000524415 382 ntBASIC2.93□□□□□ -1.94
CDH13P55290 ADI1P3-201ENST00000549509 470 ntBASIC2.93□□□□□ -1.94
CDH13P55290 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.93□□□□□ -1.94
CDH13P55290 MIR5680-201ENST00000577577 84 ntBASIC2.93□□□□□ -1.94
CDH13P55290 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.93□□□□□ -1.94
CDH13P55290 NDUFA8P1-201ENST00000605525 367 ntBASIC2.93□□□□□ -1.94
CDH13P55290 AC012409.4-201ENST00000612923 249 ntBASIC2.93□□□□□ -1.94
CDH13P55290 AP001486.3-201ENST00000615334 372 ntBASIC2.93□□□□□ -1.94
CDH13P55290 AC068880.5-201ENST00000624331 290 ntBASIC2.93□□□□□ -1.94
CDH13P55290 AC009161.2-201ENST00000624626 138 ntBASIC2.93□□□□□ -1.94
CDH13P55290 Z99571.1-201ENST00000636677 394 ntBASIC2.93□□□□□ -1.94
CDH13P55290 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.93□□□□□ -1.94
CDH13P55290 MIR622-201ENST00000638396 96 ntBASIC2.93□□□□□ -1.94
CDH13P55290 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.93□□□□□ -1.94
CDH13P55290 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.92□□□□□ -1.94
CDH13P55290 AC099654.7-201ENST00000635788 2127 ntBASIC2.92□□□□□ -1.94
CDH13P55290 RNU6-282P-201ENST00000365357 103 ntBASIC2.92□□□□□ -1.94
CDH13P55290 RNU6-61P-201ENST00000365528 109 ntBASIC2.92□□□□□ -1.94
CDH13P55290 RNU6-1103P-201ENST00000384150 107 ntBASIC2.92□□□□□ -1.94
CDH13P55290 AL031121.1-201ENST00000406553 254 ntBASIC2.92□□□□□ -1.94
CDH13P55290 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CDH13P55290 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms