Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
EPHB4P54760 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
EPHB4P54760 RNU6-1287P-201ENST00000362914 107 ntBASIC4.31□□□□□ -1.72
EPHB4P54760 RNA5SP399-201ENST00000364003 117 ntBASIC4.31□□□□□ -1.72
EPHB4P54760 RNU6-1243P-201ENST00000364028 107 ntBASIC4.31□□□□□ -1.72
EPHB4P54760 RNU6-188P-201ENST00000364207 107 ntBASIC4.31□□□□□ -1.72
EPHB4P54760 RNA5SP267-201ENST00000364893 126 ntBASIC4.31□□□□□ -1.72
EPHB4P54760 SNORD115-7-201ENST00000365306 82 ntBASIC4.31□□□□□ -1.72
EPHB4P54760 Y_RNA.364-201ENST00000365532 101 ntBASIC4.31□□□□□ -1.72
EPHB4P54760 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
EPHB4P54760 RNU6-1060P-201ENST00000384664 107 ntBASIC4.31□□□□□ -1.72
EPHB4P54760 MIR490-201ENST00000384865 128 ntBASIC4.31□□□□□ -1.72
EPHB4P54760 HMGB3P2-201ENST00000411913 584 ntBASIC4.31□□□□□ -1.72
EPHB4P54760 AC114491.1-201ENST00000416095 246 ntBASIC4.31□□□□□ -1.72
EPHB4P54760 AL591419.1-201ENST00000427423 339 ntBASIC4.31□□□□□ -1.72
EPHB4P54760 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.31□□□□□ -1.72
EPHB4P54760 RNU7-59P-201ENST00000459101 61 ntBASIC4.31□□□□□ -1.72
EPHB4P54760 AL049873.1-201ENST00000480540 376 ntBASIC4.31□□□□□ -1.72
EPHB4P54760 RN7SL283P-201ENST00000489055 303 ntBASIC4.31□□□□□ -1.72
EPHB4P54760 RPL29P14-201ENST00000495837 428 ntBASIC4.31□□□□□ -1.72
EPHB4P54760 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.31□□□□□ -1.72
EPHB4P54760 AC005798.1-201ENST00000513715 387 ntBASIC4.31□□□□□ -1.72
EPHB4P54760 Y_RNA.661-201ENST00000516003 99 ntBASIC4.31□□□□□ -1.72
EPHB4P54760 FAM60DP-201ENST00000524174 632 ntBASIC4.31□□□□□ -1.72
EPHB4P54760 AP002404.1-201ENST00000532005 451 ntBASIC4.31□□□□□ -1.72
EPHB4P54760 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.31□□□□□ -1.72
EPHB4P54760 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.31□□□□□ -1.72
EPHB4P54760 AL133271.1-201ENST00000538229 291 ntBASIC4.31□□□□□ -1.72
EPHB4P54760 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.31□□□□□ -1.72
EPHB4P54760 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.31□□□□□ -1.72
EPHB4P54760 BNIP3P16-201ENST00000589779 534 ntBASIC4.31□□□□□ -1.72
EPHB4P54760 AL669831.4-202ENST00000590817 238 ntBASIC4.31□□□□□ -1.72
EPHB4P54760 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
EPHB4P54760 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
EPHB4P54760 IPO8P1-201ENST00000455509 3109 ntBASIC4.31□□□□□ -1.72
EPHB4P54760 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
EPHB4P54760 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.31□□□□□ -1.72
EPHB4P54760 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
EPHB4P54760 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
EPHB4P54760 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
EPHB4P54760 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
EPHB4P54760 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
EPHB4P54760 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.3□□□□□ -1.72
EPHB4P54760 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.3□□□□□ -1.72
EPHB4P54760 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
EPHB4P54760 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
EPHB4P54760 Y_RNA.135-201ENST00000363439 95 ntBASIC4.3□□□□□ -1.72
EPHB4P54760 Y_RNA.176-201ENST00000363815 109 ntBASIC4.3□□□□□ -1.72
EPHB4P54760 RNU6-82P-201ENST00000363970 107 ntBASIC4.3□□□□□ -1.72
EPHB4P54760 Y_RNA.212-201ENST00000364177 102 ntBASIC4.3□□□□□ -1.72
EPHB4P54760 Y_RNA.576-201ENST00000384781 102 ntBASIC4.3□□□□□ -1.72
EPHB4P54760 EIF4E2P1-201ENST00000393781 255 ntBASIC4.3□□□□□ -1.72
EPHB4P54760 RNU2-15P-201ENST00000410692 191 ntBASIC4.3□□□□□ -1.72
EPHB4P54760 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.3□□□□□ -1.72
EPHB4P54760 AC018865.2-201ENST00000423631 129 ntBASIC4.3□□□□□ -1.72
EPHB4P54760 AC096644.2-201ENST00000429278 159 ntBASIC4.3□□□□□ -1.72
EPHB4P54760 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.3□□□□□ -1.72
EPHB4P54760 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.3□□□□□ -1.72
EPHB4P54760 CYCSP35-201ENST00000451978 304 ntBASIC4.3□□□□□ -1.72
EPHB4P54760 snoU13.7-201ENST00000459220 104 ntBASIC4.3□□□□□ -1.72
EPHB4P54760 AP001486.1-201ENST00000463339 476 ntBASIC4.3□□□□□ -1.72
EPHB4P54760 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.3□□□□□ -1.72
EPHB4P54760 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.3□□□□□ -1.72
EPHB4P54760 HMGN1P11-201ENST00000508668 303 ntBASIC4.3□□□□□ -1.72
EPHB4P54760 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.3□□□□□ -1.72
EPHB4P54760 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.3□□□□□ -1.72
EPHB4P54760 SNORA25.10-201ENST00000515926 124 ntBASIC4.3□□□□□ -1.72
EPHB4P54760 RNU7-143P-201ENST00000516781 65 ntBASIC4.3□□□□□ -1.72
EPHB4P54760 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.3□□□□□ -1.72
EPHB4P54760 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.3□□□□□ -1.72
EPHB4P54760 AC024619.4-201ENST00000580924 316 ntBASIC4.3□□□□□ -1.72
EPHB4P54760 AC023043.2-201ENST00000589678 1026 ntBASIC4.3□□□□□ -1.72
EPHB4P54760 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.3□□□□□ -1.72
EPHB4P54760 AL162373.1-201ENST00000620433 407 ntBASIC4.3□□□□□ -1.72
EPHB4P54760 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.3□□□□□ -1.72
EPHB4P54760 CDC27P3-201ENST00000635418 1910 ntBASIC4.3□□□□□ -1.72
EPHB4P54760 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.3□□□□□ -1.72
EPHB4P54760 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
EPHB4P54760 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
EPHB4P54760 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
EPHB4P54760 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
EPHB4P54760 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
EPHB4P54760 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
EPHB4P54760 PNPT1P2-201ENST00000456768 2050 ntBASIC4.3□□□□□ -1.72
EPHB4P54760 AL133412.1-201ENST00000380194 2992 ntBASIC4.29□□□□□ -1.72
EPHB4P54760 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
EPHB4P54760 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
EPHB4P54760 KPNA2P1-201ENST00000458289 1591 ntBASIC4.29□□□□□ -1.72
EPHB4P54760 RNU1-18P-201ENST00000363062 164 ntBASIC4.29□□□□□ -1.72
EPHB4P54760 SNORD35B-201ENST00000363660 87 ntBASIC4.29□□□□□ -1.72
EPHB4P54760 RNA5SP51-201ENST00000364750 119 ntBASIC4.29□□□□□ -1.72
EPHB4P54760 SNORA63.7-201ENST00000365579 123 ntBASIC4.29□□□□□ -1.72
EPHB4P54760 SNORD116-11-201ENST00000383882 92 ntBASIC4.29□□□□□ -1.72
EPHB4P54760 SNORA75B-201ENST00000384053 137 ntBASIC4.29□□□□□ -1.72
EPHB4P54760 RNU6-890P-201ENST00000384121 107 ntBASIC4.29□□□□□ -1.72
EPHB4P54760 Y_RNA.476-201ENST00000384347 108 ntBASIC4.29□□□□□ -1.72
EPHB4P54760 SNORA24.1-201ENST00000384401 135 ntBASIC4.29□□□□□ -1.72
EPHB4P54760 SOD2P1-201ENST00000396543 562 ntBASIC4.29□□□□□ -1.72
EPHB4P54760 RPL7P46-201ENST00000425129 740 ntBASIC4.29□□□□□ -1.72
EPHB4P54760 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms