Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AL929288.2-201ENST00000446368 407 ntBASIC1.45□□□□□ -2.18
NUP98P52948 PSPHP1-201ENST00000450062 261 ntBASIC1.45□□□□□ -2.18
NUP98P52948 HGF-207ENST00000453018 721 ntTSL 3 BASIC1.45□□□□□ -2.18
NUP98P52948 USP9YP34-201ENST00000453983 808 ntBASIC1.45□□□□□ -2.18
NUP98P52948 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.45□□□□□ -2.18
NUP98P52948 RPS27P21-201ENST00000486977 252 ntBASIC1.45□□□□□ -2.18
NUP98P52948 AC138853.1-201ENST00000503549 823 ntBASIC1.45□□□□□ -2.18
NUP98P52948 MRPS17P9-201ENST00000511924 393 ntBASIC1.45□□□□□ -2.18
NUP98P52948 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.45□□□□□ -2.18
NUP98P52948 RNU6-1256P-201ENST00000516539 103 ntBASIC1.45□□□□□ -2.18
NUP98P52948 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.45□□□□□ -2.18
NUP98P52948 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.45□□□□□ -2.18
NUP98P52948 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.45□□□□□ -2.18
NUP98P52948 AC040174.2-201ENST00000602701 465 ntBASIC1.45□□□□□ -2.18
NUP98P52948 AC073308.1-201ENST00000623696 305 ntBASIC1.45□□□□□ -2.18
NUP98P52948 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
NUP98P52948 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
NUP98P52948 RNA5SP465-201ENST00000391195 109 ntBASIC1.45□□□□□ -2.18
NUP98P52948 AC023141.4-201ENST00000412031 328 ntBASIC1.45□□□□□ -2.18
NUP98P52948 AIMP1P2-201ENST00000425294 312 ntBASIC1.45□□□□□ -2.18
NUP98P52948 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.45□□□□□ -2.18
NUP98P52948 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.45□□□□□ -2.18
NUP98P52948 PMCHL2-203ENST00000457791 237 ntBASIC1.45□□□□□ -2.18
NUP98P52948 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.45□□□□□ -2.18
NUP98P52948 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.45□□□□□ -2.18
NUP98P52948 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.45□□□□□ -2.18
NUP98P52948 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.45□□□□□ -2.18
NUP98P52948 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.45□□□□□ -2.18
NUP98P52948 MTCO1P40-201ENST00000574371 625 ntBASIC1.45□□□□□ -2.18
NUP98P52948 AC007229.1-201ENST00000590455 412 ntBASIC1.45□□□□□ -2.18
NUP98P52948 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.45□□□□□ -2.18
NUP98P52948 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
NUP98P52948 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.45□□□□□ -2.18
NUP98P52948 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.45□□□□□ -2.18
NUP98P52948 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
NUP98P52948 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.44□□□□□ -2.18
NUP98P52948 RNU6-582P-201ENST00000362989 107 ntBASIC1.44□□□□□ -2.18
NUP98P52948 MIR513A1-201ENST00000385138 129 ntBASIC1.44□□□□□ -2.18
NUP98P52948 SNORA46.1-201ENST00000391069 153 ntBASIC1.44□□□□□ -2.18
NUP98P52948 TPTE2P1-204ENST00000435256 593 ntBASIC1.44□□□□□ -2.18
NUP98P52948 AC241584.1-201ENST00000438469 1241 ntBASIC1.44□□□□□ -2.18
NUP98P52948 RPS4XP11-201ENST00000446897 772 ntBASIC1.44□□□□□ -2.18
NUP98P52948 RPS3AP22-201ENST00000488297 769 ntBASIC1.44□□□□□ -2.18
NUP98P52948 SUMO2P6-201ENST00000505273 288 ntBASIC1.44□□□□□ -2.18
NUP98P52948 RN7SKP49-201ENST00000516675 260 ntBASIC1.44□□□□□ -2.18
NUP98P52948 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.44□□□□□ -2.18
NUP98P52948 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.44□□□□□ -2.18
NUP98P52948 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.44□□□□□ -2.18
NUP98P52948 AP000238.1-201ENST00000608759 426 ntBASIC1.44□□□□□ -2.18
NUP98P52948 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
NUP98P52948 AC090132.2-201ENST00000615881 347 ntBASIC1.44□□□□□ -2.18
NUP98P52948 AC005296.1-201ENST00000616145 209 ntBASIC1.44□□□□□ -2.18
NUP98P52948 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
NUP98P52948 RNU5A-1-201ENST00000362698 116 ntBASIC1.43□□□□□ -2.18
NUP98P52948 RNU6-1005P-201ENST00000384519 107 ntBASIC1.43□□□□□ -2.18
NUP98P52948 AL590084.1-201ENST00000407885 387 ntBASIC1.43□□□□□ -2.18
NUP98P52948 Z80107.1-201ENST00000436830 412 ntBASIC1.43□□□□□ -2.18
NUP98P52948 AL121601.2-201ENST00000438019 707 ntBASIC1.43□□□□□ -2.18
NUP98P52948 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.43□□□□□ -2.18
NUP98P52948 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.43□□□□□ -2.18
NUP98P52948 MRPS17P3-201ENST00000465453 385 ntBASIC1.43□□□□□ -2.18
NUP98P52948 AC105252.1-201ENST00000503089 286 ntBASIC1.43□□□□□ -2.18
NUP98P52948 COL6A4P2-205ENST00000509855 506 ntBASIC1.43□□□□□ -2.18
NUP98P52948 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC1.43□□□□□ -2.18
NUP98P52948 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.43□□□□□ -2.18
NUP98P52948 MIR3199-1-201ENST00000582434 88 ntBASIC1.43□□□□□ -2.18
NUP98P52948 BNIP3P24-201ENST00000593398 557 ntBASIC1.43□□□□□ -2.18
NUP98P52948 AC025165.5-201ENST00000602802 578 ntBASIC1.43□□□□□ -2.18
NUP98P52948 AC080013.4-201ENST00000607624 649 ntBASIC1.43□□□□□ -2.18
NUP98P52948 AC007349.4-201ENST00000608114 532 ntBASIC1.43□□□□□ -2.18
NUP98P52948 DUXAP10-204ENST00000612052 616 ntBASIC1.43□□□□□ -2.18
NUP98P52948 SGO1P1-201ENST00000603525 1447 ntBASIC1.43□□□□□ -2.18
NUP98P52948 MTCO1P23-201ENST00000415223 1526 ntBASIC1.43□□□□□ -2.18
NUP98P52948 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
NUP98P52948 RNA5SP125-201ENST00000364843 120 ntBASIC1.43□□□□□ -2.18
NUP98P52948 RNU6-997P-201ENST00000384725 107 ntBASIC1.43□□□□□ -2.18
NUP98P52948 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
NUP98P52948 AL512604.1-201ENST00000404812 257 ntBASIC1.43□□□□□ -2.18
NUP98P52948 CIR1P3-201ENST00000405137 479 ntBASIC1.43□□□□□ -2.18
NUP98P52948 AL109913.1-201ENST00000421173 514 ntBASIC1.43□□□□□ -2.18
NUP98P52948 PNRC2P1-201ENST00000423940 420 ntBASIC1.43□□□□□ -2.18
NUP98P52948 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.43□□□□□ -2.18
NUP98P52948 AC023141.11-201ENST00000508864 202 ntBASIC1.43□□□□□ -2.18
NUP98P52948 SNORA31.23-201ENST00000517219 133 ntBASIC1.43□□□□□ -2.18
NUP98P52948 IGJP1-201ENST00000522682 475 ntBASIC1.43□□□□□ -2.18
NUP98P52948 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.43□□□□□ -2.18
NUP98P52948 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.43□□□□□ -2.18
NUP98P52948 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.43□□□□□ -2.18
NUP98P52948 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.43□□□□□ -2.18
NUP98P52948 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
NUP98P52948 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.42□□□□□ -2.18
NUP98P52948 AC005832.2-201ENST00000538921 1430 ntBASIC1.42□□□□□ -2.18
NUP98P52948 RNA5SP240-201ENST00000365355 128 ntBASIC1.42□□□□□ -2.18
NUP98P52948 AL356131.1-201ENST00000405826 414 ntBASIC1.42□□□□□ -2.18
NUP98P52948 AL356379.1-201ENST00000414105 126 ntBASIC1.42□□□□□ -2.18
NUP98P52948 EDDM3CP-201ENST00000415977 425 ntBASIC1.42□□□□□ -2.18
NUP98P52948 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.42□□□□□ -2.18
NUP98P52948 PSMA6P3-201ENST00000428242 164 ntBASIC1.42□□□□□ -2.18
NUP98P52948 AC016691.1-201ENST00000441321 413 ntBASIC1.42□□□□□ -2.18
NUP98P52948 RFC5P1-201ENST00000454419 874 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms