Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.23□□□□□ -2.21
GTF2A1P52655 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.23□□□□□ -2.21
GTF2A1P52655 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.23□□□□□ -2.21
GTF2A1P52655 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.23□□□□□ -2.21
GTF2A1P52655 AC011494.1-201ENST00000596454 237 ntBASIC1.23□□□□□ -2.21
GTF2A1P52655 AC022387.2-201ENST00000604050 448 ntBASIC1.23□□□□□ -2.21
GTF2A1P52655 AC004067.1-201ENST00000608733 700 ntBASIC1.23□□□□□ -2.21
GTF2A1P52655 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.23□□□□□ -2.21
GTF2A1P52655 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.22□□□□□ -2.21
GTF2A1P52655 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
GTF2A1P52655 U8.1-201ENST00000362843 134 ntBASIC1.22□□□□□ -2.21
GTF2A1P52655 SNORA27.3-201ENST00000364937 134 ntBASIC1.22□□□□□ -2.21
GTF2A1P52655 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.22□□□□□ -2.21
GTF2A1P52655 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.22□□□□□ -2.21
GTF2A1P52655 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.22□□□□□ -2.21
GTF2A1P52655 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC1.22□□□□□ -2.21
GTF2A1P52655 RNU1-41P-201ENST00000516161 162 ntBASIC1.22□□□□□ -2.21
GTF2A1P52655 RNU1-48P-201ENST00000516400 162 ntBASIC1.22□□□□□ -2.21
GTF2A1P52655 RNU6-295P-201ENST00000516901 104 ntBASIC1.22□□□□□ -2.21
GTF2A1P52655 MIR4513-201ENST00000581077 86 ntBASIC1.22□□□□□ -2.21
GTF2A1P52655 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.22□□□□□ -2.21
GTF2A1P52655 AC005261.5-201ENST00000596280 355 ntBASIC1.22□□□□□ -2.21
GTF2A1P52655 BX322635.1-201ENST00000605804 496 ntBASIC1.22□□□□□ -2.21
GTF2A1P52655 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.22□□□□□ -2.21
GTF2A1P52655 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.22□□□□□ -2.21
GTF2A1P52655 MIR5739-201ENST00000619803 80 ntBASIC1.22□□□□□ -2.21
GTF2A1P52655 AC090617.9-201ENST00000623751 147 ntBASIC1.22□□□□□ -2.21
GTF2A1P52655 MIR3199-2-201ENST00000636243 86 ntBASIC1.22□□□□□ -2.21
GTF2A1P52655 AC005539.1-201ENST00000443768 1479 ntBASIC1.22□□□□□ -2.21
GTF2A1P52655 AP000560.1-201ENST00000624150 1937 ntBASIC1.22□□□□□ -2.21
GTF2A1P52655 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
GTF2A1P52655 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
GTF2A1P52655 RNU6-60P-201ENST00000364792 103 ntBASIC1.21□□□□□ -2.22
GTF2A1P52655 SNORA70B-201ENST00000384210 135 ntBASIC1.21□□□□□ -2.22
GTF2A1P52655 RNU6-878P-201ENST00000384578 110 ntBASIC1.21□□□□□ -2.22
GTF2A1P52655 SNORA67.6-201ENST00000391093 99 ntBASIC1.21□□□□□ -2.22
GTF2A1P52655 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.21□□□□□ -2.22
GTF2A1P52655 AL449283.1-202ENST00000418249 604 ntBASIC1.21□□□□□ -2.22
GTF2A1P52655 CYCSP49-201ENST00000420810 319 ntBASIC1.21□□□□□ -2.22
GTF2A1P52655 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.21□□□□□ -2.22
GTF2A1P52655 AC244505.3-201ENST00000454598 187 ntBASIC1.21□□□□□ -2.22
GTF2A1P52655 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.21□□□□□ -2.22
GTF2A1P52655 SNORD97-201ENST00000459187 142 ntBASIC1.21□□□□□ -2.22
GTF2A1P52655 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
GTF2A1P52655 RPS27AP10-201ENST00000496103 208 ntBASIC1.21□□□□□ -2.22
GTF2A1P52655 AC119751.5-201ENST00000514077 770 ntBASIC1.21□□□□□ -2.22
GTF2A1P52655 SNORA31.24-201ENST00000517232 57 ntBASIC1.21□□□□□ -2.22
GTF2A1P52655 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.21□□□□□ -2.22
GTF2A1P52655 SNORD53B-201ENST00000577887 78 ntBASIC1.21□□□□□ -2.22
GTF2A1P52655 MIR3683-201ENST00000580847 82 ntBASIC1.21□□□□□ -2.22
GTF2A1P52655 HSPE1P19-201ENST00000603327 295 ntBASIC1.21□□□□□ -2.22
GTF2A1P52655 AL645939.4-201ENST00000604495 135 ntBASIC1.21□□□□□ -2.22
GTF2A1P52655 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC1.21□□□□□ -2.22
GTF2A1P52655 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.21□□□□□ -2.22
GTF2A1P52655 AC110491.1-201ENST00000562191 2010 ntBASIC1.21□□□□□ -2.22
GTF2A1P52655 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.2□□□□□ -2.22
GTF2A1P52655 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
GTF2A1P52655 RNU6-203P-201ENST00000384038 104 ntBASIC1.2□□□□□ -2.22
GTF2A1P52655 MTCO1P57-201ENST00000432182 261 ntBASIC1.2□□□□□ -2.22
GTF2A1P52655 RPS29P28-201ENST00000446439 141 ntBASIC1.2□□□□□ -2.22
GTF2A1P52655 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.2□□□□□ -2.22
GTF2A1P52655 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.2□□□□□ -2.22
GTF2A1P52655 AL356432.3-201ENST00000568952 465 ntBASIC1.2□□□□□ -2.22
GTF2A1P52655 MIR4422-201ENST00000581938 83 ntBASIC1.2□□□□□ -2.22
GTF2A1P52655 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC1.2□□□□□ -2.22
GTF2A1P52655 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.2□□□□□ -2.22
GTF2A1P52655 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.2□□□□□ -2.22
GTF2A1P52655 AC136601.2-201ENST00000604356 474 ntBASIC1.2□□□□□ -2.22
GTF2A1P52655 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
GTF2A1P52655 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
GTF2A1P52655 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.2□□□□□ -2.22
GTF2A1P52655 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
GTF2A1P52655 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
GTF2A1P52655 Y_RNA.67-201ENST00000362870 100 ntBASIC1.19□□□□□ -2.22
GTF2A1P52655 RNU6-1187P-201ENST00000364771 110 ntBASIC1.19□□□□□ -2.22
GTF2A1P52655 RNA5SP240-201ENST00000365355 128 ntBASIC1.19□□□□□ -2.22
GTF2A1P52655 SNORA25B-201ENST00000365507 128 ntBASIC1.19□□□□□ -2.22
GTF2A1P52655 MIR634-201ENST00000385208 97 ntBASIC1.19□□□□□ -2.22
GTF2A1P52655 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.19□□□□□ -2.22
GTF2A1P52655 RPL37P10-201ENST00000412884 288 ntBASIC1.19□□□□□ -2.22
GTF2A1P52655 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.19□□□□□ -2.22
GTF2A1P52655 AC092648.1-201ENST00000425870 423 ntBASIC1.19□□□□□ -2.22
GTF2A1P52655 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.19□□□□□ -2.22
GTF2A1P52655 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.19□□□□□ -2.22
GTF2A1P52655 AC098831.1-201ENST00000440661 216 ntBASIC1.19□□□□□ -2.22
GTF2A1P52655 AL929288.2-201ENST00000446368 407 ntBASIC1.19□□□□□ -2.22
GTF2A1P52655 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.19□□□□□ -2.22
GTF2A1P52655 RPL39P29-201ENST00000447779 157 ntBASIC1.19□□□□□ -2.22
GTF2A1P52655 RPS29P29-201ENST00000456396 171 ntBASIC1.19□□□□□ -2.22
GTF2A1P52655 AC132942.1-201ENST00000486753 483 ntBASIC1.19□□□□□ -2.22
GTF2A1P52655 MTCO3P42-201ENST00000509488 518 ntBASIC1.19□□□□□ -2.22
GTF2A1P52655 MTCO3P39-201ENST00000514812 518 ntBASIC1.19□□□□□ -2.22
GTF2A1P52655 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
GTF2A1P52655 SNORA25.11-201ENST00000515935 105 ntBASIC1.19□□□□□ -2.22
GTF2A1P52655 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.19□□□□□ -2.22
GTF2A1P52655 ARL2BPP5-201ENST00000523141 481 ntBASIC1.19□□□□□ -2.22
GTF2A1P52655 AP003033.1-201ENST00000527244 415 ntBASIC1.19□□□□□ -2.22
GTF2A1P52655 AL132857.1-201ENST00000555180 708 ntBASIC1.19□□□□□ -2.22
GTF2A1P52655 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.19□□□□□ -2.22
GTF2A1P52655 AL035411.2-201ENST00000604022 421 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms