Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CHRNA4P43681 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.78□□□□□ -1.64
CHRNA4P43681 RNU6-1301P-201ENST00000362724 104 ntBASIC4.78□□□□□ -1.64
CHRNA4P43681 Y_RNA.357-201ENST00000365487 109 ntBASIC4.78□□□□□ -1.64
CHRNA4P43681 RNU6-1293P-201ENST00000384077 107 ntBASIC4.78□□□□□ -1.64
CHRNA4P43681 RNU6-14P-201ENST00000384630 106 ntBASIC4.78□□□□□ -1.64
CHRNA4P43681 Y_RNA.563-201ENST00000384707 108 ntBASIC4.78□□□□□ -1.64
CHRNA4P43681 SNORA68.2-201ENST00000391263 128 ntBASIC4.78□□□□□ -1.64
CHRNA4P43681 RNU4-30P-201ENST00000410245 143 ntBASIC4.78□□□□□ -1.64
CHRNA4P43681 RPL23AP26-201ENST00000412728 464 ntBASIC4.78□□□□□ -1.64
CHRNA4P43681 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.78□□□□□ -1.64
CHRNA4P43681 CEACAMP1-201ENST00000434624 1035 ntBASIC4.78□□□□□ -1.64
CHRNA4P43681 AC127537.2-201ENST00000439258 465 ntBASIC4.78□□□□□ -1.64
CHRNA4P43681 AC010655.1-201ENST00000449336 292 ntBASIC4.78□□□□□ -1.64
CHRNA4P43681 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.78□□□□□ -1.64
CHRNA4P43681 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.78□□□□□ -1.64
CHRNA4P43681 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.78□□□□□ -1.64
CHRNA4P43681 SCARNA22-201ENST00000503991 125 ntBASIC4.78□□□□□ -1.64
CHRNA4P43681 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.78□□□□□ -1.64
CHRNA4P43681 AC127455.1-201ENST00000565496 145 ntBASIC4.78□□□□□ -1.64
CHRNA4P43681 MIR3934-201ENST00000579806 107 ntBASIC4.78□□□□□ -1.64
CHRNA4P43681 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.78□□□□□ -1.64
CHRNA4P43681 AL133393.1-201ENST00000603277 287 ntBASIC4.78□□□□□ -1.64
CHRNA4P43681 MIR6820-201ENST00000611508 62 ntBASIC4.78□□□□□ -1.64
CHRNA4P43681 MIR8069-1-201ENST00000616627 86 ntBASIC4.78□□□□□ -1.64
CHRNA4P43681 MIR8069-2-201ENST00000621412 86 ntBASIC4.78□□□□□ -1.64
CHRNA4P43681 RNU6-156P-201ENST00000621869 107 ntBASIC4.78□□□□□ -1.64
CHRNA4P43681 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHRNA4P43681 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
CHRNA4P43681 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CHRNA4P43681 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CHRNA4P43681 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.78□□□□□ -1.64
CHRNA4P43681 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.78□□□□□ -1.64
CHRNA4P43681 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.78□□□□□ -1.64
CHRNA4P43681 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
CHRNA4P43681 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CHRNA4P43681 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHRNA4P43681 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA4P43681 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA4P43681 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA4P43681 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.77□□□□□ -1.65
CHRNA4P43681 AC007529.1-201ENST00000418574 2178 ntBASIC4.77□□□□□ -1.65
CHRNA4P43681 AC083843.3-201ENST00000623679 2186 ntBASIC4.77□□□□□ -1.65
CHRNA4P43681 AC008568.2-201ENST00000623862 2313 ntBASIC4.77□□□□□ -1.65
CHRNA4P43681 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.77□□□□□ -1.65
CHRNA4P43681 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA4P43681 Y_RNA.324-201ENST00000365165 102 ntBASIC4.77□□□□□ -1.65
CHRNA4P43681 Y_RNA.405-201ENST00000383979 100 ntBASIC4.77□□□□□ -1.65
CHRNA4P43681 Y_RNA.451-201ENST00000384200 100 ntBASIC4.77□□□□□ -1.65
CHRNA4P43681 Y_RNA.524-201ENST00000384564 100 ntBASIC4.77□□□□□ -1.65
CHRNA4P43681 RNU6-429P-201ENST00000384582 108 ntBASIC4.77□□□□□ -1.65
CHRNA4P43681 Y_RNA.561-201ENST00000384694 100 ntBASIC4.77□□□□□ -1.65
CHRNA4P43681 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CHRNA4P43681 U3.29-201ENST00000391296 212 ntBASIC4.77□□□□□ -1.65
CHRNA4P43681 AL590762.2-201ENST00000395798 571 ntBASIC4.77□□□□□ -1.65
CHRNA4P43681 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.77□□□□□ -1.65
CHRNA4P43681 SEPT7P4-201ENST00000437076 306 ntBASIC4.77□□□□□ -1.65
CHRNA4P43681 RPL7L1P1-201ENST00000448259 785 ntBASIC4.77□□□□□ -1.65
CHRNA4P43681 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.77□□□□□ -1.65
CHRNA4P43681 RPS5P7-201ENST00000456664 608 ntBASIC4.77□□□□□ -1.65
CHRNA4P43681 U8.21-201ENST00000459536 136 ntBASIC4.77□□□□□ -1.65
CHRNA4P43681 RPS4XP22-201ENST00000480755 780 ntBASIC4.77□□□□□ -1.65
CHRNA4P43681 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.77□□□□□ -1.65
CHRNA4P43681 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.77□□□□□ -1.65
CHRNA4P43681 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.77□□□□□ -1.65
CHRNA4P43681 Y_RNA.706-201ENST00000516933 99 ntBASIC4.77□□□□□ -1.65
CHRNA4P43681 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.77□□□□□ -1.65
CHRNA4P43681 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.77□□□□□ -1.65
CHRNA4P43681 MIR3667-201ENST00000581025 74 ntBASIC4.77□□□□□ -1.65
CHRNA4P43681 RPL23AP78-201ENST00000599928 470 ntBASIC4.77□□□□□ -1.65
CHRNA4P43681 AC123912.5-201ENST00000605470 343 ntBASIC4.77□□□□□ -1.65
CHRNA4P43681 AL355816.1-201ENST00000607951 118 ntBASIC4.77□□□□□ -1.65
CHRNA4P43681 Mico1.1-201ENST00000611698 204 ntBASIC4.77□□□□□ -1.65
CHRNA4P43681 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA4P43681 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA4P43681 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.77□□□□□ -1.65
CHRNA4P43681 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA4P43681 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CHRNA4P43681 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CHRNA4P43681 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHRNA4P43681 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CHRNA4P43681 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CHRNA4P43681 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHRNA4P43681 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.76□□□□□ -1.65
CHRNA4P43681 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHRNA4P43681 RNU6-653P-201ENST00000363074 106 ntBASIC4.76□□□□□ -1.65
CHRNA4P43681 RNU1-83P-201ENST00000363426 164 ntBASIC4.76□□□□□ -1.65
CHRNA4P43681 RN7SKP103-201ENST00000363848 320 ntBASIC4.76□□□□□ -1.65
CHRNA4P43681 MIR578-201ENST00000384828 96 ntBASIC4.76□□□□□ -1.65
CHRNA4P43681 SNORA46.1-201ENST00000391069 153 ntBASIC4.76□□□□□ -1.65
CHRNA4P43681 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHRNA4P43681 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.76□□□□□ -1.65
CHRNA4P43681 MIR1302-4-201ENST00000408701 150 ntBASIC4.76□□□□□ -1.65
CHRNA4P43681 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.76□□□□□ -1.65
CHRNA4P43681 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.76□□□□□ -1.65
CHRNA4P43681 CYCSP43-201ENST00000438233 310 ntBASIC4.76□□□□□ -1.65
CHRNA4P43681 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CHRNA4P43681 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC4.76□□□□□ -1.65
CHRNA4P43681 RNU6-1211P-201ENST00000459179 105 ntBASIC4.76□□□□□ -1.65
CHRNA4P43681 AC022795.1-201ENST00000473808 480 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms