Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 MYL8P-204ENST00000431574 518 ntBASIC2.69□□□□□ -1.98
TNFRSF4P43489 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.69□□□□□ -1.98
TNFRSF4P43489 MTCO2P16-201ENST00000436962 677 ntBASIC2.69□□□□□ -1.98
TNFRSF4P43489 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.69□□□□□ -1.98
TNFRSF4P43489 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.69□□□□□ -1.98
TNFRSF4P43489 USP9YP12-201ENST00000450481 570 ntBASIC2.69□□□□□ -1.98
TNFRSF4P43489 AL590365.1-201ENST00000450788 243 ntBASIC2.69□□□□□ -1.98
TNFRSF4P43489 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.69□□□□□ -1.98
TNFRSF4P43489 RPL26P9-201ENST00000457466 433 ntBASIC2.69□□□□□ -1.98
TNFRSF4P43489 MRPS17P3-201ENST00000465453 385 ntBASIC2.69□□□□□ -1.98
TNFRSF4P43489 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
TNFRSF4P43489 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.69□□□□□ -1.98
TNFRSF4P43489 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.69□□□□□ -1.98
TNFRSF4P43489 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.69□□□□□ -1.98
TNFRSF4P43489 MIR5697-201ENST00000578045 78 ntBASIC2.69□□□□□ -1.98
TNFRSF4P43489 HMGN2P15-201ENST00000585707 270 ntBASIC2.69□□□□□ -1.98
TNFRSF4P43489 AC020895.1-201ENST00000595362 272 ntBASIC2.69□□□□□ -1.98
TNFRSF4P43489 uc_338.12-201ENST00000616344 181 ntBASIC2.69□□□□□ -1.98
TNFRSF4P43489 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.69□□□□□ -1.98
TNFRSF4P43489 AC002064.3-201ENST00000623448 346 ntBASIC2.69□□□□□ -1.98
TNFRSF4P43489 MTND4P4-201ENST00000439033 1366 ntBASIC2.69□□□□□ -1.98
TNFRSF4P43489 AC004972.1-201ENST00000623934 2209 ntBASIC2.69□□□□□ -1.98
TNFRSF4P43489 ELF2P3-201ENST00000445099 1506 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 ZNF519P1-201ENST00000449011 1626 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 AC093831.2-201ENST00000624393 3427 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.68□□□□□ -1.98
TNFRSF4P43489 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 Y_RNA.77-201ENST00000362962 107 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 RPS15AP6-201ENST00000420703 385 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 AL356583.2-201ENST00000426536 280 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 AC009414.1-201ENST00000427200 443 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 AC104651.1-201ENST00000427559 735 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 ELOCP14-201ENST00000428070 331 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.68□□□□□ -1.98
TNFRSF4P43489 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.68□□□□□ -1.98
TNFRSF4P43489 MTND1P28-201ENST00000435623 950 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 ELOCP7-201ENST00000439968 331 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.68□□□□□ -1.98
TNFRSF4P43489 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.68□□□□□ -1.98
TNFRSF4P43489 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.68□□□□□ -1.98
TNFRSF4P43489 SUMO2P6-201ENST00000505273 288 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 AC009901.1-201ENST00000506703 541 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 RPL7P20-201ENST00000520308 745 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 SUB1P1-201ENST00000524415 382 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.68□□□□□ -1.98
TNFRSF4P43489 ZNF519P3-201ENST00000557158 1032 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.68□□□□□ -1.98
TNFRSF4P43489 AC012414.6-201ENST00000568241 401 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.68□□□□□ -1.98
TNFRSF4P43489 AC104984.5-201ENST00000586878 94 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.68□□□□□ -1.98
TNFRSF4P43489 NBR2-204ENST00000587322 63 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 AC005498.1-201ENST00000592125 465 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 AC010620.2-201ENST00000600135 313 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 AL355877.2-201ENST00000603670 358 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 AC098826.3-201ENST00000603823 466 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 AL359999.1-201ENST00000604513 294 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 MTND4LP5-201ENST00000605152 292 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 AC004805.2-201ENST00000605382 482 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 AC080013.6-201ENST00000606185 215 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 AL391813.2-201ENST00000609113 322 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
TNFRSF4P43489 UCA1.1-201ENST00000620952 75 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.68□□□□□ -1.98
TNFRSF4P43489 FRG1KP-201ENST00000623592 341 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 AC090617.7-201ENST00000623952 126 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 CTSLP2-204ENST00000629029 392 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.68□□□□□ -1.98
TNFRSF4P43489 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.68□□□□□ -1.98
TNFRSF4P43489 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
TNFRSF4P43489 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
TNFRSF4P43489 AC092104.1-201ENST00000497346 1441 ntBASIC2.68□□□□□ -1.98
TNFRSF4P43489 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
TNFRSF4P43489 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
TNFRSF4P43489 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
TNFRSF4P43489 MIR181A2-201ENST00000384863 110 ntBASIC2.67□□□□□ -1.98
TNFRSF4P43489 AL512633.1-201ENST00000399931 655 ntBASIC2.67□□□□□ -1.98
TNFRSF4P43489 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.67□□□□□ -1.98
TNFRSF4P43489 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.67□□□□□ -1.98
TNFRSF4P43489 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.67□□□□□ -1.98
TNFRSF4P43489 ZNF90P2-204ENST00000419323 1075 ntBASIC2.67□□□□□ -1.98
TNFRSF4P43489 RAC1P6-201ENST00000423911 575 ntBASIC2.67□□□□□ -1.98
TNFRSF4P43489 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.67□□□□□ -1.98
TNFRSF4P43489 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.67□□□□□ -1.98
TNFRSF4P43489 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.67□□□□□ -1.98
TNFRSF4P43489 RPS29P6-201ENST00000438196 145 ntBASIC2.67□□□□□ -1.98
TNFRSF4P43489 RPS15AP27-201ENST00000449183 343 ntBASIC2.67□□□□□ -1.98
TNFRSF4P43489 CECR9-201ENST00000453421 199 ntBASIC2.67□□□□□ -1.98
TNFRSF4P43489 SSXP1-201ENST00000453640 473 ntBASIC2.67□□□□□ -1.98
TNFRSF4P43489 RBM43P1-201ENST00000476891 1081 ntBASIC2.67□□□□□ -1.98
TNFRSF4P43489 TRBV12-1-201ENST00000479785 344 ntBASIC2.67□□□□□ -1.98
TNFRSF4P43489 AP004217.1-201ENST00000480579 346 ntBASIC2.67□□□□□ -1.98
TNFRSF4P43489 RPL36AP51-201ENST00000487216 318 ntBASIC2.67□□□□□ -1.98
TNFRSF4P43489 AC022634.1-201ENST00000520765 532 ntBASIC2.67□□□□□ -1.98
TNFRSF4P43489 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.67□□□□□ -1.98
TNFRSF4P43489 AL512310.1-201ENST00000548639 172 ntBASIC2.67□□□□□ -1.98
TNFRSF4P43489 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.67□□□□□ -1.98
TNFRSF4P43489 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.67□□□□□ -1.98
TNFRSF4P43489 AP005136.1-201ENST00000579765 429 ntBASIC2.67□□□□□ -1.98
TNFRSF4P43489 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms