Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SOX3P41225 MTND5P7-201ENST00000413558 1798 ntBASIC2.77□□□□□ -1.97
SOX3P41225 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.77□□□□□ -1.97
SOX3P41225 RNU6-188P-201ENST00000364207 107 ntBASIC2.77□□□□□ -1.97
SOX3P41225 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SOX3P41225 AL139397.2-201ENST00000404529 772 ntBASIC2.77□□□□□ -1.97
SOX3P41225 RNU2-39P-201ENST00000410604 198 ntBASIC2.77□□□□□ -1.97
SOX3P41225 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.77□□□□□ -1.97
SOX3P41225 RPL36AP6-201ENST00000435770 321 ntBASIC2.77□□□□□ -1.97
SOX3P41225 HMGN2P20-201ENST00000437531 273 ntBASIC2.77□□□□□ -1.97
SOX3P41225 MTND1P34-201ENST00000438556 671 ntBASIC2.77□□□□□ -1.97
SOX3P41225 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.77□□□□□ -1.97
SOX3P41225 NEFMP1-201ENST00000443423 1006 ntBASIC2.77□□□□□ -1.97
SOX3P41225 AC013267.1-201ENST00000458227 267 ntBASIC2.77□□□□□ -1.97
SOX3P41225 RNA5SP310-201ENST00000459084 116 ntBASIC2.77□□□□□ -1.97
SOX3P41225 AC091179.1-201ENST00000461606 579 ntBASIC2.77□□□□□ -1.97
SOX3P41225 RPL7P5-201ENST00000471472 736 ntBASIC2.77□□□□□ -1.97
SOX3P41225 AC117440.1-201ENST00000474107 571 ntBASIC2.77□□□□□ -1.97
SOX3P41225 AC126389.1-201ENST00000477436 290 ntBASIC2.77□□□□□ -1.97
SOX3P41225 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.77□□□□□ -1.97
SOX3P41225 RN7SL20P-201ENST00000488827 297 ntBASIC2.77□□□□□ -1.97
SOX3P41225 AC007182.2-201ENST00000489251 402 ntBASIC2.77□□□□□ -1.97
SOX3P41225 AC010493.1-201ENST00000513479 292 ntBASIC2.77□□□□□ -1.97
SOX3P41225 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.77□□□□□ -1.97
SOX3P41225 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.77□□□□□ -1.97
SOX3P41225 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.77□□□□□ -1.97
SOX3P41225 ATP5F1P5-201ENST00000526403 760 ntBASIC2.77□□□□□ -1.97
SOX3P41225 AC022690.1-201ENST00000526681 550 ntBASIC2.77□□□□□ -1.97
SOX3P41225 AC106782.4-201ENST00000568264 210 ntBASIC2.77□□□□□ -1.97
SOX3P41225 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.77□□□□□ -1.97
SOX3P41225 AC174048.1-201ENST00000603389 144 ntBASIC2.77□□□□□ -1.97
SOX3P41225 AC007363.1-201ENST00000604736 620 ntBASIC2.77□□□□□ -1.97
SOX3P41225 AC009161.2-201ENST00000624626 138 ntBASIC2.77□□□□□ -1.97
SOX3P41225 OR5AK4P-201ENST00000635912 903 ntBASIC2.77□□□□□ -1.97
SOX3P41225 MTND1P37-201ENST00000636562 264 ntBASIC2.77□□□□□ -1.97
SOX3P41225 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.77□□□□□ -1.97
SOX3P41225 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SOX3P41225 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.76□□□□□ -1.97
SOX3P41225 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
SOX3P41225 AC007785.2-201ENST00000598627 1916 ntBASIC2.76□□□□□ -1.97
SOX3P41225 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SOX3P41225 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SOX3P41225 Y_RNA.3-201ENST00000362331 103 ntBASIC2.76□□□□□ -1.97
SOX3P41225 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SOX3P41225 RNU6-74P-201ENST00000384235 107 ntBASIC2.76□□□□□ -1.97
SOX3P41225 RPL5P18-201ENST00000406671 891 ntBASIC2.76□□□□□ -1.97
SOX3P41225 RNA5SP274-201ENST00000410484 108 ntBASIC2.76□□□□□ -1.97
SOX3P41225 RNA5SP344-201ENST00000411081 104 ntBASIC2.76□□□□□ -1.97
SOX3P41225 TMEM167AP1-201ENST00000423409 219 ntBASIC2.76□□□□□ -1.97
SOX3P41225 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.76□□□□□ -1.97
SOX3P41225 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.76□□□□□ -1.97
SOX3P41225 DPPA2P1-201ENST00000428060 556 ntBASIC2.76□□□□□ -1.97
SOX3P41225 AC093106.2-201ENST00000428212 385 ntBASIC2.76□□□□□ -1.97
SOX3P41225 RPL23AP30-201ENST00000432419 501 ntBASIC2.76□□□□□ -1.97
SOX3P41225 RPS20P5-201ENST00000434808 360 ntBASIC2.76□□□□□ -1.97
SOX3P41225 SNRPEP4-201ENST00000435815 279 ntBASIC2.76□□□□□ -1.97
SOX3P41225 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.76□□□□□ -1.97
SOX3P41225 SSXP4-201ENST00000451349 245 ntBASIC2.76□□□□□ -1.97
SOX3P41225 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
SOX3P41225 RPS3AP14-201ENST00000483907 780 ntBASIC2.76□□□□□ -1.97
SOX3P41225 RN7SL633P-201ENST00000488974 297 ntBASIC2.76□□□□□ -1.97
SOX3P41225 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.76□□□□□ -1.97
SOX3P41225 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.76□□□□□ -1.97
SOX3P41225 RNU6-1282P-201ENST00000516735 96 ntBASIC2.76□□□□□ -1.97
SOX3P41225 RNU6-410P-201ENST00000517006 107 ntBASIC2.76□□□□□ -1.97
SOX3P41225 FAM92A1P1-201ENST00000528023 890 ntBASIC2.76□□□□□ -1.97
SOX3P41225 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.76□□□□□ -1.97
SOX3P41225 AC104763.2-201ENST00000604179 382 ntBASIC2.76□□□□□ -1.97
SOX3P41225 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.76□□□□□ -1.97
SOX3P41225 AC007619.2-201ENST00000605743 379 ntBASIC2.76□□□□□ -1.97
SOX3P41225 AC093732.2-201ENST00000607950 274 ntBASIC2.76□□□□□ -1.97
SOX3P41225 AC004832.5-201ENST00000608677 401 ntBASIC2.76□□□□□ -1.97
SOX3P41225 AL365204.3-201ENST00000612448 685 ntBASIC2.76□□□□□ -1.97
SOX3P41225 AC007318.2-201ENST00000620999 243 ntBASIC2.76□□□□□ -1.97
SOX3P41225 AL589994.2-201ENST00000621124 579 ntBASIC2.76□□□□□ -1.97
SOX3P41225 AC027309.3-201ENST00000623419 351 ntBASIC2.76□□□□□ -1.97
SOX3P41225 AL136164.4-201ENST00000625013 2135 ntBASIC2.76□□□□□ -1.97
SOX3P41225 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.76□□□□□ -1.97
SOX3P41225 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.76□□□□□ -1.97
SOX3P41225 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.76□□□□□ -1.97
SOX3P41225 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SOX3P41225 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
SOX3P41225 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SOX3P41225 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.75□□□□□ -1.97
SOX3P41225 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.75□□□□□ -1.97
SOX3P41225 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.75□□□□□ -1.97
SOX3P41225 RNU6-946P-201ENST00000383878 107 ntBASIC2.75□□□□□ -1.97
SOX3P41225 RNU6-741P-201ENST00000383889 107 ntBASIC2.75□□□□□ -1.97
SOX3P41225 RNU6-456P-201ENST00000384493 107 ntBASIC2.75□□□□□ -1.97
SOX3P41225 SNORA1.3-201ENST00000384676 136 ntBASIC2.75□□□□□ -1.97
SOX3P41225 FAT1P1-201ENST00000406588 507 ntBASIC2.75□□□□□ -1.97
SOX3P41225 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.75□□□□□ -1.97
SOX3P41225 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.75□□□□□ -1.97
SOX3P41225 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.75□□□□□ -1.97
SOX3P41225 AC114491.1-201ENST00000416095 246 ntBASIC2.75□□□□□ -1.97
SOX3P41225 AC092047.1-201ENST00000424997 240 ntBASIC2.75□□□□□ -1.97
SOX3P41225 MTATP6P16-201ENST00000434543 526 ntBASIC2.75□□□□□ -1.97
SOX3P41225 AC092573.2-201ENST00000434546 243 ntBASIC2.75□□□□□ -1.97
SOX3P41225 AL451074.3-201ENST00000437709 472 ntBASIC2.75□□□□□ -1.97
SOX3P41225 HIGD1AP11-201ENST00000438361 280 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms