Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 SNORA70.24-201ENST00000517233 118 ntBASIC3.16□□□□□ -1.9
HOXD13P35453 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXD13P35453 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXD13P35453 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.16□□□□□ -1.9
HOXD13P35453 CYCSP39-201ENST00000565821 309 ntBASIC3.16□□□□□ -1.9
HOXD13P35453 MIR3167-201ENST00000579623 85 ntBASIC3.16□□□□□ -1.9
HOXD13P35453 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXD13P35453 AC072046.2-201ENST00000618366 268 ntBASIC3.16□□□□□ -1.9
HOXD13P35453 Z99571.1-201ENST00000636677 394 ntBASIC3.16□□□□□ -1.9
HOXD13P35453 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HOXD13P35453 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
HOXD13P35453 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
HOXD13P35453 AC096644.4-201ENST00000563417 2912 ntBASIC3.16□□□□□ -1.9
HOXD13P35453 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
HOXD13P35453 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
HOXD13P35453 AC138915.1-201ENST00000565427 1685 ntBASIC3.15□□□□□ -1.9
HOXD13P35453 NACAP2-201ENST00000318548 624 ntBASIC3.15□□□□□ -1.91
HOXD13P35453 MIR181A2-201ENST00000384863 110 ntBASIC3.15□□□□□ -1.91
HOXD13P35453 MIR128-1-201ENST00000384921 82 ntBASIC3.15□□□□□ -1.91
HOXD13P35453 UBA52P6-201ENST00000399822 382 ntBASIC3.15□□□□□ -1.91
HOXD13P35453 RPL5P18-201ENST00000406671 891 ntBASIC3.15□□□□□ -1.91
HOXD13P35453 RN7SKP58-201ENST00000411010 305 ntBASIC3.15□□□□□ -1.91
HOXD13P35453 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXD13P35453 C1DP2-201ENST00000418167 426 ntBASIC3.15□□□□□ -1.91
HOXD13P35453 AC093151.1-201ENST00000427711 313 ntBASIC3.15□□□□□ -1.91
HOXD13P35453 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.15□□□□□ -1.91
HOXD13P35453 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.15□□□□□ -1.91
HOXD13P35453 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXD13P35453 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.15□□□□□ -1.91
HOXD13P35453 RPL31P41-201ENST00000477967 372 ntBASIC3.15□□□□□ -1.91
HOXD13P35453 RAP1BP2-201ENST00000478270 544 ntBASIC3.15□□□□□ -1.91
HOXD13P35453 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.15□□□□□ -1.91
HOXD13P35453 AC026427.2-201ENST00000506228 536 ntBASIC3.15□□□□□ -1.91
HOXD13P35453 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.15□□□□□ -1.91
HOXD13P35453 Y_RNA.689-201ENST00000516589 107 ntBASIC3.15□□□□□ -1.91
HOXD13P35453 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.15□□□□□ -1.91
HOXD13P35453 ADI1P3-201ENST00000549509 470 ntBASIC3.15□□□□□ -1.91
HOXD13P35453 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.15□□□□□ -1.91
HOXD13P35453 H3F3AP1-201ENST00000559984 334 ntBASIC3.15□□□□□ -1.91
HOXD13P35453 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXD13P35453 AC040904.1-201ENST00000590850 223 ntBASIC3.15□□□□□ -1.91
HOXD13P35453 AC110760.3-201ENST00000598794 467 ntBASIC3.15□□□□□ -1.91
HOXD13P35453 AC078899.3-201ENST00000599065 212 ntBASIC3.15□□□□□ -1.91
HOXD13P35453 AC010620.2-201ENST00000600135 313 ntBASIC3.15□□□□□ -1.91
HOXD13P35453 AC010620.1-201ENST00000601088 1102 ntBASIC3.15□□□□□ -1.91
HOXD13P35453 AC073544.2-201ENST00000601155 540 ntBASIC3.15□□□□□ -1.91
HOXD13P35453 AL139286.2-201ENST00000606838 396 ntBASIC3.15□□□□□ -1.91
HOXD13P35453 AC004832.5-201ENST00000608677 401 ntBASIC3.15□□□□□ -1.91
HOXD13P35453 AL020991.1-201ENST00000612314 373 ntBASIC3.15□□□□□ -1.91
HOXD13P35453 AC130324.3-201ENST00000614165 542 ntBASIC3.15□□□□□ -1.91
HOXD13P35453 AL162274.2-201ENST00000614406 332 ntBASIC3.15□□□□□ -1.91
HOXD13P35453 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
HOXD13P35453 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXD13P35453 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.15□□□□□ -1.91
HOXD13P35453 AC084035.1-201ENST00000634543 607 ntBASIC3.15□□□□□ -1.91
HOXD13P35453 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HOXD13P35453 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
HOXD13P35453 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.15□□□□□ -1.91
HOXD13P35453 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HOXD13P35453 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HOXD13P35453 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HOXD13P35453 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HOXD13P35453 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
HOXD13P35453 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HOXD13P35453 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.14□□□□□ -1.91
HOXD13P35453 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXD13P35453 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
HOXD13P35453 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXD13P35453 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXD13P35453 SNORA9.2-201ENST00000365361 133 ntBASIC3.14□□□□□ -1.91
HOXD13P35453 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
HOXD13P35453 SNORA18.3-201ENST00000384122 132 ntBASIC3.14□□□□□ -1.91
HOXD13P35453 RNU6-658P-201ENST00000384606 106 ntBASIC3.14□□□□□ -1.91
HOXD13P35453 RNU6-297P-201ENST00000384636 107 ntBASIC3.14□□□□□ -1.91
HOXD13P35453 MIR491-201ENST00000384877 84 ntBASIC3.14□□□□□ -1.91
HOXD13P35453 SKA2P1-201ENST00000425592 390 ntBASIC3.14□□□□□ -1.91
HOXD13P35453 AC244505.4-201ENST00000434905 287 ntBASIC3.14□□□□□ -1.91
HOXD13P35453 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.14□□□□□ -1.91
HOXD13P35453 AL022238.1-201ENST00000442557 355 ntBASIC3.14□□□□□ -1.91
HOXD13P35453 SSXP5-201ENST00000443473 287 ntBASIC3.14□□□□□ -1.91
HOXD13P35453 RPS3AP12-201ENST00000443616 753 ntBASIC3.14□□□□□ -1.91
HOXD13P35453 AC244505.5-201ENST00000443639 207 ntBASIC3.14□□□□□ -1.91
HOXD13P35453 WASF1P1-201ENST00000447560 1131 ntBASIC3.14□□□□□ -1.91
HOXD13P35453 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.14□□□□□ -1.91
HOXD13P35453 AC080014.1-201ENST00000496877 1201 ntBASIC3.14□□□□□ -1.91
HOXD13P35453 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.14□□□□□ -1.91
HOXD13P35453 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.14□□□□□ -1.91
HOXD13P35453 RNU6-914P-201ENST00000516749 109 ntBASIC3.14□□□□□ -1.91
HOXD13P35453 RN7SKP282-201ENST00000516824 299 ntBASIC3.14□□□□□ -1.91
HOXD13P35453 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.14□□□□□ -1.91
HOXD13P35453 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.14□□□□□ -1.91
HOXD13P35453 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.14□□□□□ -1.91
HOXD13P35453 AC064872.1-201ENST00000604823 1072 ntBASIC3.14□□□□□ -1.91
HOXD13P35453 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HOXD13P35453 MIR98-201ENST00000606724 119 ntBASIC3.14□□□□□ -1.91
HOXD13P35453 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXD13P35453 AC090115.4-201ENST00000609970 188 ntBASIC3.14□□□□□ -1.91
HOXD13P35453 AC002064.3-201ENST00000623448 346 ntBASIC3.14□□□□□ -1.91
HOXD13P35453 U6.99-201ENST00000637524 83 ntBASIC3.14□□□□□ -1.91
HOXD13P35453 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms