Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 UBE2V1P11-201ENST00000411559 285 ntBASIC1.29□□□□□ -2.2
SDC4P31431 AP000949.1-201ENST00000438328 629 ntBASIC1.29□□□□□ -2.2
SDC4P31431 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.29□□□□□ -2.2
SDC4P31431 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.29□□□□□ -2.2
SDC4P31431 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.29□□□□□ -2.2
SDC4P31431 AC098862.1-201ENST00000504991 413 ntBASIC1.29□□□□□ -2.2
SDC4P31431 HSPA8P13-201ENST00000523715 472 ntBASIC1.29□□□□□ -2.2
SDC4P31431 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.29□□□□□ -2.2
SDC4P31431 MIR4713-201ENST00000582691 75 ntBASIC1.29□□□□□ -2.2
SDC4P31431 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.29□□□□□ -2.2
SDC4P31431 GAS5-AS1-201ENST00000602767 694 ntBASIC1.29□□□□□ -2.2
SDC4P31431 MTND4LP5-201ENST00000605152 292 ntBASIC1.29□□□□□ -2.2
SDC4P31431 AC022202.1-201ENST00000613515 211 ntBASIC1.29□□□□□ -2.2
SDC4P31431 AL157834.3-201ENST00000615543 103 ntBASIC1.29□□□□□ -2.2
SDC4P31431 MIR6130-201ENST00000619419 109 ntBASIC1.29□□□□□ -2.2
SDC4P31431 AC091304.6-201ENST00000619761 202 ntBASIC1.29□□□□□ -2.2
SDC4P31431 AL353770.2-201ENST00000620024 78 ntBASIC1.29□□□□□ -2.2
SDC4P31431 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
SDC4P31431 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.29□□□□□ -2.2
SDC4P31431 AC005832.2-201ENST00000538921 1430 ntBASIC1.29□□□□□ -2.2
SDC4P31431 MTCO1P23-201ENST00000415223 1526 ntBASIC1.29□□□□□ -2.2
SDC4P31431 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.28□□□□□ -2.2
SDC4P31431 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
SDC4P31431 AL161781.1-201ENST00000354277 403 ntBASIC1.28□□□□□ -2.2
SDC4P31431 RNU4-51P-201ENST00000364206 140 ntBASIC1.28□□□□□ -2.2
SDC4P31431 RNU6-748P-201ENST00000384648 107 ntBASIC1.28□□□□□ -2.2
SDC4P31431 SNORA40.19-201ENST00000390846 128 ntBASIC1.28□□□□□ -2.2
SDC4P31431 RPL23AP29-201ENST00000397284 453 ntBASIC1.28□□□□□ -2.2
SDC4P31431 AL356131.1-201ENST00000405826 414 ntBASIC1.28□□□□□ -2.2
SDC4P31431 AC018630.2-202ENST00000422992 927 ntBASIC1.28□□□□□ -2.2
SDC4P31431 AC015922.2-201ENST00000435593 184 ntBASIC1.28□□□□□ -2.2
SDC4P31431 RAD1P2-201ENST00000446414 663 ntBASIC1.28□□□□□ -2.2
SDC4P31431 AL096803.2-201ENST00000450032 677 ntBASIC1.28□□□□□ -2.2
SDC4P31431 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.28□□□□□ -2.2
SDC4P31431 AL049874.1-201ENST00000489560 388 ntBASIC1.28□□□□□ -2.2
SDC4P31431 RPL36AP21-201ENST00000490372 323 ntBASIC1.28□□□□□ -2.2
SDC4P31431 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SDC4P31431 MRPS33P3-201ENST00000513456 322 ntBASIC1.28□□□□□ -2.2
SDC4P31431 RNA5SP458-201ENST00000516188 119 ntBASIC1.28□□□□□ -2.2
SDC4P31431 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.28□□□□□ -2.2
SDC4P31431 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.28□□□□□ -2.2
SDC4P31431 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.28□□□□□ -2.2
SDC4P31431 AC084364.2-201ENST00000546924 395 ntBASIC1.28□□□□□ -2.2
SDC4P31431 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.28□□□□□ -2.2
SDC4P31431 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC1.28□□□□□ -2.2
SDC4P31431 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.28□□□□□ -2.2
SDC4P31431 AC023043.2-201ENST00000589678 1026 ntBASIC1.28□□□□□ -2.2
SDC4P31431 AC073413.2-201ENST00000604332 360 ntBASIC1.28□□□□□ -2.2
SDC4P31431 AC016925.2-201ENST00000605108 242 ntBASIC1.28□□□□□ -2.2
SDC4P31431 AC103810.8-201ENST00000607347 118 ntBASIC1.28□□□□□ -2.2
SDC4P31431 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.28□□□□□ -2.2
SDC4P31431 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.28□□□□□ -2.2
SDC4P31431 FTX_3.1-201ENST00000610451 147 ntBASIC1.28□□□□□ -2.2
SDC4P31431 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
SDC4P31431 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.28□□□□□ -2.2
SDC4P31431 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.28□□□□□ -2.2
SDC4P31431 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
SDC4P31431 RNU6-878P-201ENST00000384578 110 ntBASIC1.27□□□□□ -2.21
SDC4P31431 MIR525-201ENST00000384978 85 ntBASIC1.27□□□□□ -2.21
SDC4P31431 RNU2-63P-201ENST00000410792 194 ntBASIC1.27□□□□□ -2.21
SDC4P31431 USP9YP6-201ENST00000413550 854 ntBASIC1.27□□□□□ -2.21
SDC4P31431 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.27□□□□□ -2.21
SDC4P31431 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SDC4P31431 HSPE1P24-201ENST00000450782 238 ntBASIC1.27□□□□□ -2.21
SDC4P31431 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SDC4P31431 FAM206BP-201ENST00000510179 541 ntBASIC1.27□□□□□ -2.21
SDC4P31431 SNORA31.22-201ENST00000517204 135 ntBASIC1.27□□□□□ -2.21
SDC4P31431 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.27□□□□□ -2.21
SDC4P31431 IGJP1-201ENST00000522682 475 ntBASIC1.27□□□□□ -2.21
SDC4P31431 AC090821.2-201ENST00000523552 176 ntBASIC1.27□□□□□ -2.21
SDC4P31431 DUXAP5-201ENST00000529668 529 ntBASIC1.27□□□□□ -2.21
SDC4P31431 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.27□□□□□ -2.21
SDC4P31431 AL359212.1-201ENST00000556608 614 ntBASIC1.27□□□□□ -2.21
SDC4P31431 DUXAP1-201ENST00000556632 463 ntBASIC1.27□□□□□ -2.21
SDC4P31431 AC008269.2-201ENST00000561915 1105 ntBASIC1.27□□□□□ -2.21
SDC4P31431 SUB1P3-201ENST00000564581 315 ntBASIC1.27□□□□□ -2.21
SDC4P31431 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.27□□□□□ -2.21
SDC4P31431 MIR3198-2-201ENST00000577868 80 ntBASIC1.27□□□□□ -2.21
SDC4P31431 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.27□□□□□ -2.21
SDC4P31431 AL138963.2-201ENST00000605137 226 ntBASIC1.27□□□□□ -2.21
SDC4P31431 AL121652.1-201ENST00000608851 448 ntBASIC1.27□□□□□ -2.21
SDC4P31431 DUXAP10-204ENST00000612052 616 ntBASIC1.27□□□□□ -2.21
SDC4P31431 RNU6-486P-201ENST00000363116 107 ntBASIC1.26□□□□□ -2.21
SDC4P31431 RNA5SP212-201ENST00000391223 107 ntBASIC1.26□□□□□ -2.21
SDC4P31431 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.26□□□□□ -2.21
SDC4P31431 AC098831.1-201ENST00000440661 216 ntBASIC1.26□□□□□ -2.21
SDC4P31431 AC009238.1-201ENST00000442165 424 ntBASIC1.26□□□□□ -2.21
SDC4P31431 AC009237.6-201ENST00000446969 424 ntBASIC1.26□□□□□ -2.21
SDC4P31431 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.26□□□□□ -2.21
SDC4P31431 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC1.26□□□□□ -2.21
SDC4P31431 RNU6-991P-201ENST00000516168 107 ntBASIC1.26□□□□□ -2.21
SDC4P31431 RNA5SP291-201ENST00000517222 105 ntBASIC1.26□□□□□ -2.21
SDC4P31431 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.26□□□□□ -2.21
SDC4P31431 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.26□□□□□ -2.21
SDC4P31431 SULT1C2P1-202ENST00000562418 459 ntBASIC1.26□□□□□ -2.21
SDC4P31431 AC022254.1-201ENST00000567857 235 ntBASIC1.26□□□□□ -2.21
SDC4P31431 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.26□□□□□ -2.21
SDC4P31431 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.26□□□□□ -2.21
SDC4P31431 AC022387.2-201ENST00000604050 448 ntBASIC1.26□□□□□ -2.21
SDC4P31431 BX322635.1-201ENST00000605804 496 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms