Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AC034222.1-201ENST00000494052 532 ntBASIC1.72□□□□□ -2.13
CD40LGP29965 CKS1BP2-201ENST00000497342 240 ntBASIC1.72□□□□□ -2.13
CD40LGP29965 HMGB1P35-201ENST00000503360 598 ntBASIC1.72□□□□□ -2.13
CD40LGP29965 AC020699.1-201ENST00000505161 445 ntBASIC1.72□□□□□ -2.13
CD40LGP29965 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.72□□□□□ -2.13
CD40LGP29965 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.72□□□□□ -2.13
CD40LGP29965 HIGD1AP17-201ENST00000554576 276 ntBASIC1.72□□□□□ -2.13
CD40LGP29965 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.72□□□□□ -2.13
CD40LGP29965 MIR1273D-201ENST00000577266 86 ntBASIC1.72□□□□□ -2.13
CD40LGP29965 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.72□□□□□ -2.13
CD40LGP29965 BNIP3P23-201ENST00000599655 511 ntBASIC1.72□□□□□ -2.13
CD40LGP29965 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
CD40LGP29965 CDR1-202ENST00000625883 1485 ntBASIC1.71□□□□□ -2.14
CD40LGP29965 RNA5SP289-201ENST00000362332 137 ntBASIC1.71□□□□□ -2.14
CD40LGP29965 RNU1-72P-201ENST00000362976 153 ntBASIC1.71□□□□□ -2.14
CD40LGP29965 RNU6-97P-201ENST00000363387 104 ntBASIC1.71□□□□□ -2.14
CD40LGP29965 RNU6-354P-201ENST00000383862 107 ntBASIC1.71□□□□□ -2.14
CD40LGP29965 RNU6-610P-201ENST00000384264 107 ntBASIC1.71□□□□□ -2.14
CD40LGP29965 RPL22P22-201ENST00000395439 379 ntBASIC1.71□□□□□ -2.14
CD40LGP29965 AL139156.1-201ENST00000412785 841 ntBASIC1.71□□□□□ -2.14
CD40LGP29965 SNORD56-201ENST00000413522 71 ntBASIC1.71□□□□□ -2.14
CD40LGP29965 AC097463.2-201ENST00000421074 142 ntBASIC1.71□□□□□ -2.14
CD40LGP29965 AL160275.3-201ENST00000423876 471 ntBASIC1.71□□□□□ -2.14
CD40LGP29965 BX119904.4-201ENST00000424402 301 ntBASIC1.71□□□□□ -2.14
CD40LGP29965 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.71□□□□□ -2.14
CD40LGP29965 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.71□□□□□ -2.14
CD40LGP29965 AL161788.1-201ENST00000441805 169 ntBASIC1.71□□□□□ -2.14
CD40LGP29965 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.71□□□□□ -2.14
CD40LGP29965 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CD40LGP29965 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.71□□□□□ -2.14
CD40LGP29965 RNA5SP165-201ENST00000517142 115 ntBASIC1.71□□□□□ -2.14
CD40LGP29965 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.71□□□□□ -2.14
CD40LGP29965 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.71□□□□□ -2.14
CD40LGP29965 AC090079.2-201ENST00000575289 768 ntBASIC1.71□□□□□ -2.14
CD40LGP29965 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.71□□□□□ -2.14
CD40LGP29965 AC009974.1-201ENST00000608881 455 ntBASIC1.71□□□□□ -2.14
CD40LGP29965 AL109620.1-201ENST00000618738 1197 ntBASIC1.71□□□□□ -2.14
CD40LGP29965 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.71□□□□□ -2.14
CD40LGP29965 AC091953.2-201ENST00000623979 160 ntBASIC1.71□□□□□ -2.14
CD40LGP29965 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.71□□□□□ -2.14
CD40LGP29965 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.7□□□□□ -2.14
CD40LGP29965 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CD40LGP29965 RNU6-343P-201ENST00000364709 104 ntBASIC1.7□□□□□ -2.14
CD40LGP29965 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.7□□□□□ -2.14
CD40LGP29965 MIR518A2-201ENST00000384966 87 ntBASIC1.7□□□□□ -2.14
CD40LGP29965 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.7□□□□□ -2.14
CD40LGP29965 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.7□□□□□ -2.14
CD40LGP29965 AL445685.2-201ENST00000422551 342 ntBASIC1.7□□□□□ -2.14
CD40LGP29965 MTCO1P3-201ENST00000429327 192 ntBASIC1.7□□□□□ -2.14
CD40LGP29965 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CD40LGP29965 AC010153.1-201ENST00000432862 727 ntBASIC1.7□□□□□ -2.14
CD40LGP29965 RPL7P34-201ENST00000433316 712 ntBASIC1.7□□□□□ -2.14
CD40LGP29965 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.7□□□□□ -2.14
CD40LGP29965 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.7□□□□□ -2.14
CD40LGP29965 AL353718.1-201ENST00000451028 517 ntBASIC1.7□□□□□ -2.14
CD40LGP29965 AC087884.1-201ENST00000469738 328 ntBASIC1.7□□□□□ -2.14
CD40LGP29965 AC021382.1-201ENST00000483523 359 ntBASIC1.7□□□□□ -2.14
CD40LGP29965 AC055855.1-201ENST00000489563 579 ntBASIC1.7□□□□□ -2.14
CD40LGP29965 MTND5P13-201ENST00000513046 1079 ntBASIC1.7□□□□□ -2.14
CD40LGP29965 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.7□□□□□ -2.14
CD40LGP29965 AC110760.3-202ENST00000515177 371 ntBASIC1.7□□□□□ -2.14
CD40LGP29965 SNORA4.4-201ENST00000515921 135 ntBASIC1.7□□□□□ -2.14
CD40LGP29965 RNU6-703P-201ENST00000516946 107 ntBASIC1.7□□□□□ -2.14
CD40LGP29965 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CD40LGP29965 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CD40LGP29965 AL121821.2-201ENST00000556081 394 ntBASIC1.7□□□□□ -2.14
CD40LGP29965 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.7□□□□□ -2.14
CD40LGP29965 AL353997.4-201ENST00000586196 166 ntBASIC1.7□□□□□ -2.14
CD40LGP29965 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.7□□□□□ -2.14
CD40LGP29965 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.7□□□□□ -2.14
CD40LGP29965 AL583856.2-201ENST00000606298 543 ntBASIC1.7□□□□□ -2.14
CD40LGP29965 AC009237.15-201ENST00000610252 501 ntBASIC1.7□□□□□ -2.14
CD40LGP29965 HPVC1-201ENST00000629899 1198 ntBASIC1.7□□□□□ -2.14
CD40LGP29965 AC116618.1-201ENST00000634617 774 ntBASIC1.7□□□□□ -2.14
CD40LGP29965 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CD40LGP29965 LINC02211-204ENST00000642024 1070 ntBASIC1.7□□□□□ -2.14
CD40LGP29965 U8.2-201ENST00000363156 134 ntBASIC1.69□□□□□ -2.14
CD40LGP29965 RNU5B-1-201ENST00000363286 116 ntBASIC1.69□□□□□ -2.14
CD40LGP29965 RNA5SP363-201ENST00000365072 115 ntBASIC1.69□□□□□ -2.14
CD40LGP29965 SNORA8-201ENST00000384574 139 ntBASIC1.69□□□□□ -2.14
CD40LGP29965 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.69□□□□□ -2.14
CD40LGP29965 RPS20P15-201ENST00000412792 311 ntBASIC1.69□□□□□ -2.14
CD40LGP29965 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.69□□□□□ -2.14
CD40LGP29965 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.69□□□□□ -2.14
CD40LGP29965 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.69□□□□□ -2.14
CD40LGP29965 AC092634.2-201ENST00000428146 1010 ntBASIC1.69□□□□□ -2.14
CD40LGP29965 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.69□□□□□ -2.14
CD40LGP29965 IFNA20P-201ENST00000436840 528 ntBASIC1.69□□□□□ -2.14
CD40LGP29965 MTCO1P53-201ENST00000441633 699 ntBASIC1.69□□□□□ -2.14
CD40LGP29965 RPL32P28-201ENST00000443577 397 ntBASIC1.69□□□□□ -2.14
CD40LGP29965 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.69□□□□□ -2.14
CD40LGP29965 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.69□□□□□ -2.14
CD40LGP29965 TRBV12-1-201ENST00000479785 344 ntBASIC1.69□□□□□ -2.14
CD40LGP29965 AC008628.1-201ENST00000508663 265 ntBASIC1.69□□□□□ -2.14
CD40LGP29965 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.69□□□□□ -2.14
CD40LGP29965 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.69□□□□□ -2.14
CD40LGP29965 HSPE1P18-201ENST00000517602 280 ntBASIC1.69□□□□□ -2.14
CD40LGP29965 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.69□□□□□ -2.14
CD40LGP29965 SLC2A13P1-201ENST00000531560 322 ntBASIC1.69□□□□□ -2.14
CD40LGP29965 CBX3P4-201ENST00000538909 354 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms