Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.85□□□□□ -2.11
HLA-DMAP28067 AL356596.1-201ENST00000624230 379 ntBASIC1.85□□□□□ -2.11
HLA-DMAP28067 ELF2P3-201ENST00000445099 1506 ntBASIC1.85□□□□□ -2.11
HLA-DMAP28067 DDX43P2-201ENST00000604753 1354 ntBASIC1.85□□□□□ -2.11
HLA-DMAP28067 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.84□□□□□ -2.11
HLA-DMAP28067 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
HLA-DMAP28067 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
HLA-DMAP28067 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
HLA-DMAP28067 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.84□□□□□ -2.11
HLA-DMAP28067 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HLA-DMAP28067 MTND5P33-201ENST00000571250 1450 ntBASIC1.84□□□□□ -2.11
HLA-DMAP28067 RNU6-433P-201ENST00000363216 104 ntBASIC1.84□□□□□ -2.11
HLA-DMAP28067 RNU4-92P-201ENST00000363783 136 ntBASIC1.84□□□□□ -2.11
HLA-DMAP28067 SNORA70.4-201ENST00000365509 134 ntBASIC1.84□□□□□ -2.11
HLA-DMAP28067 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HLA-DMAP28067 RNU6-906P-201ENST00000384700 70 ntBASIC1.84□□□□□ -2.11
HLA-DMAP28067 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HLA-DMAP28067 TXNP7-201ENST00000406296 293 ntBASIC1.84□□□□□ -2.11
HLA-DMAP28067 RNA5SP489-201ENST00000410986 109 ntBASIC1.84□□□□□ -2.11
HLA-DMAP28067 AC096664.2-201ENST00000411843 406 ntBASIC1.84□□□□□ -2.11
HLA-DMAP28067 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DMAP28067 AC107081.1-201ENST00000414975 361 ntBASIC1.84□□□□□ -2.11
HLA-DMAP28067 ELOCP9-201ENST00000418624 239 ntBASIC1.84□□□□□ -2.11
HLA-DMAP28067 AL451054.2-201ENST00000420896 202 ntBASIC1.84□□□□□ -2.11
HLA-DMAP28067 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.84□□□□□ -2.11
HLA-DMAP28067 BX276092.3-201ENST00000424182 230 ntBASIC1.84□□□□□ -2.11
HLA-DMAP28067 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DMAP28067 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.84□□□□□ -2.11
HLA-DMAP28067 AC010153.1-201ENST00000432862 727 ntBASIC1.84□□□□□ -2.11
HLA-DMAP28067 RSU1P2-202ENST00000437884 485 ntBASIC1.84□□□□□ -2.11
HLA-DMAP28067 MTND3P1-201ENST00000441336 220 ntBASIC1.84□□□□□ -2.11
HLA-DMAP28067 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DMAP28067 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.84□□□□□ -2.11
HLA-DMAP28067 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.84□□□□□ -2.11
HLA-DMAP28067 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DMAP28067 AC104563.1-201ENST00000476147 376 ntBASIC1.84□□□□□ -2.11
HLA-DMAP28067 MRPS17P9-201ENST00000511924 393 ntBASIC1.84□□□□□ -2.11
HLA-DMAP28067 SNORD19.2-201ENST00000516978 73 ntBASIC1.84□□□□□ -2.11
HLA-DMAP28067 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DMAP28067 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DMAP28067 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DMAP28067 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.84□□□□□ -2.11
HLA-DMAP28067 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DMAP28067 AC009712.1-201ENST00000564938 316 ntBASIC1.84□□□□□ -2.11
HLA-DMAP28067 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.84□□□□□ -2.11
HLA-DMAP28067 MTCO2P2-201ENST00000591258 225 ntBASIC1.84□□□□□ -2.11
HLA-DMAP28067 AC068276.1-201ENST00000605793 379 ntBASIC1.84□□□□□ -2.11
HLA-DMAP28067 AC097468.3-201ENST00000607956 456 ntBASIC1.84□□□□□ -2.11
HLA-DMAP28067 AC239868.4-201ENST00000608318 671 ntBASIC1.84□□□□□ -2.11
HLA-DMAP28067 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.84□□□□□ -2.11
HLA-DMAP28067 AC009159.1-201ENST00000618386 642 ntBASIC1.84□□□□□ -2.11
HLA-DMAP28067 AL109620.1-201ENST00000618738 1197 ntBASIC1.84□□□□□ -2.11
HLA-DMAP28067 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.84□□□□□ -2.11
HLA-DMAP28067 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.84□□□□□ -2.12
HLA-DMAP28067 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.83□□□□□ -2.12
HLA-DMAP28067 AC099786.3-201ENST00000565735 1410 ntBASIC1.83□□□□□ -2.12
HLA-DMAP28067 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
HLA-DMAP28067 RNU6-636P-201ENST00000384598 107 ntBASIC1.83□□□□□ -2.12
HLA-DMAP28067 MIR221-201ENST00000385135 110 ntBASIC1.83□□□□□ -2.12
HLA-DMAP28067 GSTA9P-201ENST00000406231 611 ntBASIC1.83□□□□□ -2.12
HLA-DMAP28067 MIR320C1-201ENST00000408566 88 ntBASIC1.83□□□□□ -2.12
HLA-DMAP28067 MTCO2P8-201ENST00000412213 658 ntBASIC1.83□□□□□ -2.12
HLA-DMAP28067 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.83□□□□□ -2.12
HLA-DMAP28067 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.83□□□□□ -2.12
HLA-DMAP28067 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.83□□□□□ -2.12
HLA-DMAP28067 RPL30P4-201ENST00000429309 333 ntBASIC1.83□□□□□ -2.12
HLA-DMAP28067 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.83□□□□□ -2.12
HLA-DMAP28067 USP9YP24-201ENST00000434374 697 ntBASIC1.83□□□□□ -2.12
HLA-DMAP28067 AC107083.1-201ENST00000439643 279 ntBASIC1.83□□□□□ -2.12
HLA-DMAP28067 USP9YP17-201ENST00000444617 696 ntBASIC1.83□□□□□ -2.12
HLA-DMAP28067 AC010631.1-201ENST00000474150 156 ntBASIC1.83□□□□□ -2.12
HLA-DMAP28067 TRBV1-201ENST00000476502 284 ntBASIC1.83□□□□□ -2.12
HLA-DMAP28067 RNA5SP148-201ENST00000516527 94 ntBASIC1.83□□□□□ -2.12
HLA-DMAP28067 RPL7P20-201ENST00000520308 745 ntBASIC1.83□□□□□ -2.12
HLA-DMAP28067 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.83□□□□□ -2.12
HLA-DMAP28067 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.83□□□□□ -2.12
HLA-DMAP28067 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.83□□□□□ -2.12
HLA-DMAP28067 AF038458.1-201ENST00000588406 262 ntBASIC1.83□□□□□ -2.12
HLA-DMAP28067 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.83□□□□□ -2.12
HLA-DMAP28067 BNIP3P39-201ENST00000601077 554 ntBASIC1.83□□□□□ -2.12
HLA-DMAP28067 AC004987.4-201ENST00000603383 338 ntBASIC1.83□□□□□ -2.12
HLA-DMAP28067 DPPA3P3-201ENST00000603842 430 ntBASIC1.83□□□□□ -2.12
HLA-DMAP28067 AL139022.2-201ENST00000606934 443 ntBASIC1.83□□□□□ -2.12
HLA-DMAP28067 AC092106.3-201ENST00000611308 722 ntBASIC1.83□□□□□ -2.12
HLA-DMAP28067 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.83□□□□□ -2.12
HLA-DMAP28067 MIR6817-201ENST00000615588 66 ntBASIC1.83□□□□□ -2.12
HLA-DMAP28067 AC009268.2-201ENST00000621925 457 ntBASIC1.83□□□□□ -2.12
HLA-DMAP28067 AL078595.3-201ENST00000623815 1166 ntBASIC1.83□□□□□ -2.12
HLA-DMAP28067 AP001002.2-201ENST00000625137 386 ntBASIC1.83□□□□□ -2.12
HLA-DMAP28067 PISRT1-201ENST00000626175 531 ntBASIC1.83□□□□□ -2.12
HLA-DMAP28067 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
HLA-DMAP28067 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
HLA-DMAP28067 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
HLA-DMAP28067 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
HLA-DMAP28067 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
HLA-DMAP28067 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.83□□□□□ -2.12
HLA-DMAP28067 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.82□□□□□ -2.12
HLA-DMAP28067 RNU6-7-201ENST00000364784 107 ntBASIC1.82□□□□□ -2.12
HLA-DMAP28067 RNU6-8-201ENST00000365467 107 ntBASIC1.82□□□□□ -2.12
HLA-DMAP28067 RNU6-432P-201ENST00000384196 109 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms