Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 AC104073.1-201ENST00000451988 151 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.69□□□□□ -2.14
COL5A3P25940 CDC42P4-201ENST00000510507 563 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.69□□□□□ -2.14
COL5A3P25940 SNRPGP16-201ENST00000533275 226 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.69□□□□□ -2.14
COL5A3P25940 AC090502.2-201ENST00000549267 280 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 AL137100.2-201ENST00000555786 315 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 MTCO1P40-201ENST00000574371 625 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.69□□□□□ -2.14
COL5A3P25940 BNIP3P40-201ENST00000596017 556 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 AC245884.10-201ENST00000597355 337 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.69□□□□□ -2.14
COL5A3P25940 AC024060.1-201ENST00000607052 494 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 AC009974.1-201ENST00000608881 455 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 AP002782.1-201ENST00000623107 614 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 AC104985.3-201ENST00000623479 597 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 AC116618.1-201ENST00000634617 774 ntBASIC1.69□□□□□ -2.14
COL5A3P25940 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.68□□□□□ -2.14
COL5A3P25940 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
COL5A3P25940 RNU6-444P-201ENST00000383988 108 ntBASIC1.68□□□□□ -2.14
COL5A3P25940 SNORD116-23-201ENST00000384645 92 ntBASIC1.68□□□□□ -2.14
COL5A3P25940 MIR524-201ENST00000385242 87 ntBASIC1.68□□□□□ -2.14
COL5A3P25940 Y_RNA.578-201ENST00000390903 88 ntBASIC1.68□□□□□ -2.14
COL5A3P25940 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
COL5A3P25940 AL591034.1-201ENST00000407447 340 ntBASIC1.68□□□□□ -2.14
COL5A3P25940 AL356320.2-201ENST00000417263 507 ntBASIC1.68□□□□□ -2.14
COL5A3P25940 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.68□□□□□ -2.14
COL5A3P25940 RPL35AP22-201ENST00000436855 335 ntBASIC1.68□□□□□ -2.14
COL5A3P25940 AC241584.1-201ENST00000438469 1241 ntBASIC1.68□□□□□ -2.14
COL5A3P25940 AL645638.1-201ENST00000440519 361 ntBASIC1.68□□□□□ -2.14
COL5A3P25940 AL589880.1-201ENST00000448271 287 ntBASIC1.68□□□□□ -2.14
COL5A3P25940 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.68□□□□□ -2.14
COL5A3P25940 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.68□□□□□ -2.14
COL5A3P25940 AC013828.1-201ENST00000481845 158 ntBASIC1.68□□□□□ -2.14
COL5A3P25940 AC090096.1-201ENST00000489168 390 ntBASIC1.68□□□□□ -2.14
COL5A3P25940 UBE2V1P12-201ENST00000503954 474 ntBASIC1.68□□□□□ -2.14
COL5A3P25940 BOLA3P3-201ENST00000505182 232 ntBASIC1.68□□□□□ -2.14
COL5A3P25940 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.68□□□□□ -2.14
COL5A3P25940 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.68□□□□□ -2.14
COL5A3P25940 AP005435.4-201ENST00000529514 284 ntBASIC1.68□□□□□ -2.14
COL5A3P25940 ZNF705CP-201ENST00000530515 889 ntBASIC1.68□□□□□ -2.14
COL5A3P25940 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.68□□□□□ -2.14
COL5A3P25940 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.68□□□□□ -2.14
COL5A3P25940 MTATP6P3-201ENST00000581686 676 ntBASIC1.68□□□□□ -2.14
COL5A3P25940 SNORD39.3-201ENST00000584451 71 ntBASIC1.68□□□□□ -2.14
COL5A3P25940 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.68□□□□□ -2.14
COL5A3P25940 AC021749.1-201ENST00000604322 607 ntBASIC1.68□□□□□ -2.14
COL5A3P25940 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.68□□□□□ -2.14
COL5A3P25940 LINC02211-204ENST00000642024 1070 ntBASIC1.68□□□□□ -2.14
COL5A3P25940 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.68□□□□□ -2.14
COL5A3P25940 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.67□□□□□ -2.14
COL5A3P25940 AC130650.2-201ENST00000618736 2403 ntBASIC1.67□□□□□ -2.14
COL5A3P25940 RNU6-906P-201ENST00000384700 70 ntBASIC1.67□□□□□ -2.14
COL5A3P25940 MIR649-201ENST00000384843 97 ntBASIC1.67□□□□□ -2.14
COL5A3P25940 RNU6-1300P-201ENST00000391046 108 ntBASIC1.67□□□□□ -2.14
COL5A3P25940 SSXP10-201ENST00000402595 565 ntBASIC1.67□□□□□ -2.14
COL5A3P25940 FCF1P2-201ENST00000415284 583 ntBASIC1.67□□□□□ -2.14
COL5A3P25940 AL445669.1-201ENST00000426743 755 ntBASIC1.67□□□□□ -2.14
COL5A3P25940 SEPT7P5-201ENST00000434048 306 ntBASIC1.67□□□□□ -2.14
COL5A3P25940 UBE2V1P13-201ENST00000436983 439 ntBASIC1.67□□□□□ -2.14
COL5A3P25940 MTCO2P20-201ENST00000437339 673 ntBASIC1.67□□□□□ -2.14
COL5A3P25940 CALM1P1-201ENST00000442082 433 ntBASIC1.67□□□□□ -2.14
COL5A3P25940 AL009048.1-201ENST00000450437 298 ntBASIC1.67□□□□□ -2.14
COL5A3P25940 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
COL5A3P25940 MTCO3P2-201ENST00000457365 171 ntBASIC1.67□□□□□ -2.14
COL5A3P25940 AC034222.1-201ENST00000494052 532 ntBASIC1.67□□□□□ -2.14
COL5A3P25940 HMGB1P22-201ENST00000505315 124 ntBASIC1.67□□□□□ -2.14
COL5A3P25940 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.67□□□□□ -2.14
COL5A3P25940 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.67□□□□□ -2.14
COL5A3P25940 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.67□□□□□ -2.14
COL5A3P25940 SNORA31.20-201ENST00000517111 133 ntBASIC1.67□□□□□ -2.14
COL5A3P25940 RNU1-104P-201ENST00000517280 175 ntBASIC1.67□□□□□ -2.14
COL5A3P25940 MTND2P32-201ENST00000521584 1038 ntBASIC1.67□□□□□ -2.14
COL5A3P25940 AC006329.2-201ENST00000611491 394 ntBASIC1.67□□□□□ -2.14
COL5A3P25940 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
COL5A3P25940 AL138880.2-201ENST00000616214 239 ntBASIC1.67□□□□□ -2.14
COL5A3P25940 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.67□□□□□ -2.14
COL5A3P25940 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.67□□□□□ -2.14
COL5A3P25940 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
COL5A3P25940 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 HMGB1P5-201ENST00000255320 642 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 SNORA40.6-201ENST00000391153 128 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 AL136372.1-201ENST00000403060 228 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 AL079342.2-201ENST00000403367 482 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 RNA5SP56-201ENST00000410277 118 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 TPMTP3-201ENST00000411928 735 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 RPS3AP37-201ENST00000419176 745 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 AC007435.1-201ENST00000421086 415 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 MTCO1P3-201ENST00000429327 192 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.66□□□□□ -2.14
COL5A3P25940 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 IFNA20P-201ENST00000436840 528 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 AL358794.1-201ENST00000445689 381 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 NDUFA5P7-201ENST00000452914 242 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 AC010285.1-201ENST00000470580 392 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms