Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AP005902.1-201ENST00000521358 186 ntBASIC0.87□□□□□ -2.27
TOP2AP11388 AC087272.1-201ENST00000523624 533 ntBASIC0.87□□□□□ -2.27
TOP2AP11388 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.87□□□□□ -2.27
TOP2AP11388 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
TOP2AP11388 AC099548.1-201ENST00000421443 426 ntBASIC0.86□□□□□ -2.27
TOP2AP11388 EIF4EP4-201ENST00000424916 578 ntBASIC0.86□□□□□ -2.27
TOP2AP11388 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.86□□□□□ -2.27
TOP2AP11388 AC098591.2-201ENST00000510152 315 ntBASIC0.86□□□□□ -2.27
TOP2AP11388 CYCSP23-201ENST00000519781 313 ntBASIC0.86□□□□□ -2.27
TOP2AP11388 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.86□□□□□ -2.27
TOP2AP11388 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.86□□□□□ -2.27
TOP2AP11388 AL590282.1-201ENST00000610379 1136 ntBASIC0.86□□□□□ -2.27
TOP2AP11388 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.85□□□□□ -2.27
TOP2AP11388 AC092047.1-201ENST00000424997 240 ntBASIC0.85□□□□□ -2.27
TOP2AP11388 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
TOP2AP11388 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC0.85□□□□□ -2.27
TOP2AP11388 AK3P2-201ENST00000507976 429 ntBASIC0.85□□□□□ -2.27
TOP2AP11388 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
TOP2AP11388 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.85□□□□□ -2.27
TOP2AP11388 AC243960.4-201ENST00000600532 288 ntBASIC0.85□□□□□ -2.27
TOP2AP11388 AC087821.2-201ENST00000637086 450 ntBASIC0.85□□□□□ -2.27
TOP2AP11388 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC0.85□□□□□ -2.27
TOP2AP11388 HSBP1P2-201ENST00000299671 229 ntBASIC0.84□□□□□ -2.27
TOP2AP11388 Y_RNA.433-201ENST00000384089 102 ntBASIC0.84□□□□□ -2.27
TOP2AP11388 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.84□□□□□ -2.27
TOP2AP11388 AC036111.3-201ENST00000526389 112 ntBASIC0.84□□□□□ -2.27
TOP2AP11388 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
TOP2AP11388 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.84□□□□□ -2.28
TOP2AP11388 RPL7P30-201ENST00000420888 709 ntBASIC0.84□□□□□ -2.28
TOP2AP11388 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.84□□□□□ -2.28
TOP2AP11388 AC241584.1-201ENST00000438469 1241 ntBASIC0.84□□□□□ -2.28
TOP2AP11388 RPL31P41-201ENST00000477967 372 ntBASIC0.84□□□□□ -2.28
TOP2AP11388 FAM206BP-201ENST00000510179 541 ntBASIC0.84□□□□□ -2.28
TOP2AP11388 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC0.84□□□□□ -2.28
TOP2AP11388 AC087359.1-201ENST00000508335 1740 ntBASIC0.83□□□□□ -2.28
TOP2AP11388 RNU6-335P-201ENST00000364563 113 ntBASIC0.83□□□□□ -2.28
TOP2AP11388 AC245047.4-201ENST00000433189 144 ntBASIC0.83□□□□□ -2.28
TOP2AP11388 RPS20P10-201ENST00000451209 253 ntBASIC0.83□□□□□ -2.28
TOP2AP11388 DUXAP8-207ENST00000456786 622 ntBASIC0.83□□□□□ -2.28
TOP2AP11388 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.83□□□□□ -2.28
TOP2AP11388 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.83□□□□□ -2.28
TOP2AP11388 RNU6-1222P-201ENST00000384615 107 ntBASIC0.82□□□□□ -2.28
TOP2AP11388 RNA5SP127-201ENST00000411051 133 ntBASIC0.82□□□□□ -2.28
TOP2AP11388 SEPT2P1-201ENST00000419651 180 ntBASIC0.82□□□□□ -2.28
TOP2AP11388 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC0.82□□□□□ -2.28
TOP2AP11388 AC009296.1-201ENST00000443146 155 ntBASIC0.82□□□□□ -2.28
TOP2AP11388 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.82□□□□□ -2.28
TOP2AP11388 AC138853.1-201ENST00000503549 823 ntBASIC0.82□□□□□ -2.28
TOP2AP11388 RNU11-2P-201ENST00000516898 142 ntBASIC0.82□□□□□ -2.28
TOP2AP11388 AC073544.1-201ENST00000600110 1595 ntBASIC0.82□□□□□ -2.28
TOP2AP11388 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
TOP2AP11388 SNORA68.1-201ENST00000364537 132 ntBASIC0.81□□□□□ -2.28
TOP2AP11388 SNORA25.8-201ENST00000364831 128 ntBASIC0.81□□□□□ -2.28
TOP2AP11388 AL591043.1-201ENST00000432461 424 ntBASIC0.81□□□□□ -2.28
TOP2AP11388 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.81□□□□□ -2.28
TOP2AP11388 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.81□□□□□ -2.28
TOP2AP11388 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC0.81□□□□□ -2.28
TOP2AP11388 AC023932.2-201ENST00000603176 175 ntBASIC0.81□□□□□ -2.28
TOP2AP11388 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.81□□□□□ -2.28
TOP2AP11388 AP000776.1-201ENST00000530032 1663 ntBASIC0.81□□□□□ -2.28
TOP2AP11388 AL022578.1-201ENST00000439330 1433 ntBASIC0.81□□□□□ -2.28
TOP2AP11388 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.8□□□□□ -2.28
TOP2AP11388 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.8□□□□□ -2.28
TOP2AP11388 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
TOP2AP11388 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.8□□□□□ -2.28
TOP2AP11388 MTATP6P7-201ENST00000453315 681 ntBASIC0.8□□□□□ -2.28
TOP2AP11388 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.8□□□□□ -2.28
TOP2AP11388 AC109927.2-201ENST00000506416 303 ntBASIC0.8□□□□□ -2.28
TOP2AP11388 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC0.8□□□□□ -2.28
TOP2AP11388 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
TOP2AP11388 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
TOP2AP11388 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.79□□□□□ -2.28
TOP2AP11388 Y_RNA.458-201ENST00000384240 102 ntBASIC0.79□□□□□ -2.28
TOP2AP11388 RABEPKP1-201ENST00000440529 1026 ntBASIC0.79□□□□□ -2.28
TOP2AP11388 HMGN2P9-201ENST00000476875 229 ntBASIC0.79□□□□□ -2.28
TOP2AP11388 NAA50-206ENST00000493454 964 ntTSL 2 BASIC0.79□□□□□ -2.28
TOP2AP11388 AC068787.1-201ENST00000623908 691 ntBASIC0.79□□□□□ -2.28
TOP2AP11388 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC0.79□□□□□ -2.28
TOP2AP11388 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
TOP2AP11388 RNA5SP276-201ENST00000362580 94 ntBASIC0.79□□□□□ -2.28
TOP2AP11388 RPL37P10-201ENST00000412884 288 ntBASIC0.79□□□□□ -2.28
TOP2AP11388 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.79□□□□□ -2.28
TOP2AP11388 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC0.79□□□□□ -2.28
TOP2AP11388 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.79□□□□□ -2.28
TOP2AP11388 AP003497.1-201ENST00000528472 562 ntBASIC0.79□□□□□ -2.28
TOP2AP11388 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC0.79□□□□□ -2.28
TOP2AP11388 AC091925.2-201ENST00000625059 256 ntBASIC0.79□□□□□ -2.28
TOP2AP11388 PIGPP2-201ENST00000411569 458 ntBASIC0.78□□□□□ -2.28
TOP2AP11388 MIR3198-2-201ENST00000577868 80 ntBASIC0.78□□□□□ -2.28
TOP2AP11388 AP003072.4-201ENST00000624580 310 ntBASIC0.78□□□□□ -2.28
TOP2AP11388 RNU2-70P-201ENST00000410718 179 ntBASIC0.77□□□□□ -2.29
TOP2AP11388 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC0.77□□□□□ -2.29
TOP2AP11388 AL158823.1-201ENST00000418441 478 ntBASIC0.77□□□□□ -2.29
TOP2AP11388 TOMM22P2-201ENST00000430735 237 ntBASIC0.77□□□□□ -2.29
TOP2AP11388 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.77□□□□□ -2.29
TOP2AP11388 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.77□□□□□ -2.29
TOP2AP11388 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC0.77□□□□□ -2.29
TOP2AP11388 AC090132.2-201ENST00000615881 347 ntBASIC0.77□□□□□ -2.29
TOP2AP11388 ZNF37BP-203ENST00000452306 1352 ntBASIC0.77□□□□□ -2.29
TOP2AP11388 RNU6-222P-201ENST00000362438 107 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms