Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 AC110491.1-201ENST00000562191 2010 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 MTND5P29-201ENST00000458676 1807 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 RNA5SP160-201ENST00000364866 120 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.9□□□□□ -2.11
MT-ND4P03905 RNU1-73P-201ENST00000383971 164 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 RNU6-769P-201ENST00000384407 104 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 RNU6-83P-201ENST00000384568 112 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 RNU6-925P-201ENST00000384629 104 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 MIR1305-201ENST00000408300 86 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 MTCO2P8-201ENST00000412213 658 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.9□□□□□ -2.11
MT-ND4P03905 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.9□□□□□ -2.11
MT-ND4P03905 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.9□□□□□ -2.11
MT-ND4P03905 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.9□□□□□ -2.11
MT-ND4P03905 Z80107.1-201ENST00000436830 412 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 AC018634.1-201ENST00000437554 401 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 GPM6BP3-201ENST00000442797 145 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.9□□□□□ -2.11
MT-ND4P03905 LTV1P1-201ENST00000510683 1237 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 RNU7-193P-201ENST00000516723 65 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 MIR514B-201ENST00000516774 80 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 RNU1-40P-201ENST00000516816 164 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 RNU1-97P-201ENST00000516872 164 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 RNA5SP364-201ENST00000516938 78 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 RNU6-64P-201ENST00000517119 105 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 RNA5SP165-201ENST00000517142 115 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 RN7SKP258-201ENST00000517151 304 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.9□□□□□ -2.11
MT-ND4P03905 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.9□□□□□ -2.11
MT-ND4P03905 AC025755.1-201ENST00000521306 278 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 AC013828.2-201ENST00000532487 235 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.9□□□□□ -2.11
MT-ND4P03905 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.9□□□□□ -2.11
MT-ND4P03905 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.9□□□□□ -2.11
MT-ND4P03905 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.9□□□□□ -2.11
MT-ND4P03905 MIR4293-201ENST00000584305 78 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 BNIP3P23-201ENST00000599655 511 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 AC098826.3-201ENST00000603823 466 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 AL161798.1-201ENST00000604630 131 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.9□□□□□ -2.11
MT-ND4P03905 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
MT-ND4P03905 AL589743.7-201ENST00000612637 233 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 AL139418.1-201ENST00000613613 177 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 AL109620.1-201ENST00000618738 1197 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.9□□□□□ -2.11
MT-ND4P03905 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.9□□□□□ -2.11
MT-ND4P03905 AC010889.1-201ENST00000566193 2666 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 AL359851.1-201ENST00000569460 4997 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.9□□□□□ -2.11
MT-ND4P03905 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
MT-ND4P03905 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.89□□□□□ -2.11
MT-ND4P03905 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.89□□□□□ -2.11
MT-ND4P03905 RNU6-157P-201ENST00000383957 107 ntBASIC1.89□□□□□ -2.11
MT-ND4P03905 U3.26-201ENST00000391236 204 ntBASIC1.89□□□□□ -2.11
MT-ND4P03905 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.89□□□□□ -2.11
MT-ND4P03905 NDUFS5P4-201ENST00000412983 318 ntBASIC1.89□□□□□ -2.11
MT-ND4P03905 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.89□□□□□ -2.11
MT-ND4P03905 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.89□□□□□ -2.11
MT-ND4P03905 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.89□□□□□ -2.11
MT-ND4P03905 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.89□□□□□ -2.11
MT-ND4P03905 HSFY7P-201ENST00000432672 318 ntBASIC1.89□□□□□ -2.11
MT-ND4P03905 HSFY8P-201ENST00000437934 318 ntBASIC1.89□□□□□ -2.11
MT-ND4P03905 AC098831.1-201ENST00000440661 216 ntBASIC1.89□□□□□ -2.11
MT-ND4P03905 PSPHP1-201ENST00000450062 261 ntBASIC1.89□□□□□ -2.11
MT-ND4P03905 RPL23AP35-201ENST00000451906 501 ntBASIC1.89□□□□□ -2.11
MT-ND4P03905 HSFY5P-201ENST00000453726 309 ntBASIC1.89□□□□□ -2.11
MT-ND4P03905 AC025033.1-201ENST00000463883 194 ntBASIC1.89□□□□□ -2.11
MT-ND4P03905 KLF3P2-201ENST00000465138 268 ntBASIC1.89□□□□□ -2.11
MT-ND4P03905 AL121769.1-201ENST00000469473 401 ntBASIC1.89□□□□□ -2.11
MT-ND4P03905 AC126389.1-201ENST00000477436 290 ntBASIC1.89□□□□□ -2.11
MT-ND4P03905 AC023141.11-201ENST00000508864 202 ntBASIC1.89□□□□□ -2.11
MT-ND4P03905 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
MT-ND4P03905 SNORA31.6-201ENST00000516241 130 ntBASIC1.89□□□□□ -2.11
MT-ND4P03905 RNU1-103P-201ENST00000516502 125 ntBASIC1.89□□□□□ -2.11
MT-ND4P03905 AC105185.1-201ENST00000518705 535 ntBASIC1.89□□□□□ -2.11
MT-ND4P03905 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
MT-ND4P03905 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.89□□□□□ -2.11
MT-ND4P03905 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
MT-ND4P03905 LRRC37A5P-203ENST00000580181 585 ntBASIC1.89□□□□□ -2.11
MT-ND4P03905 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.89□□□□□ -2.11
MT-ND4P03905 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.89□□□□□ -2.11
MT-ND4P03905 AC068790.3-201ENST00000602988 553 ntBASIC1.89□□□□□ -2.11
MT-ND4P03905 AL450336.1-201ENST00000605180 586 ntBASIC1.89□□□□□ -2.11
MT-ND4P03905 AL121917.1-203ENST00000605534 577 ntBASIC1.89□□□□□ -2.11
MT-ND4P03905 AC007349.4-201ENST00000608114 532 ntBASIC1.89□□□□□ -2.11
MT-ND4P03905 AC107214.2-201ENST00000608204 634 ntBASIC1.89□□□□□ -2.11
MT-ND4P03905 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.89□□□□□ -2.11
MT-ND4P03905 AC107294.1-201ENST00000609524 467 ntBASIC1.89□□□□□ -2.11
MT-ND4P03905 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
MT-ND4P03905 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
MT-ND4P03905 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.89□□□□□ -2.11
MT-ND4P03905 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.89□□□□□ -2.11
MT-ND4P03905 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
MT-ND4P03905 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
MT-ND4P03905 AC106754.1-201ENST00000562632 1513 ntBASIC1.88□□□□□ -2.11
MT-ND4P03905 OR56A5-201ENST00000340110 738 ntBASIC1.88□□□□□ -2.11
MT-ND4P03905 RNU6-512P-201ENST00000364438 103 ntBASIC1.88□□□□□ -2.11
MT-ND4P03905 MIR17-201ENST00000385012 84 ntBASIC1.88□□□□□ -2.11
MT-ND4P03905 SNORA46.1-201ENST00000391069 153 ntBASIC1.88□□□□□ -2.11
MT-ND4P03905 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms