Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RPL21P93-201ENST00000480465 489 ntBASIC2.79□□□□□ -1.96
PDGFBP01127 AC087190.1-201ENST00000484462 480 ntBASIC2.79□□□□□ -1.96
PDGFBP01127 RN7SL283P-201ENST00000489055 303 ntBASIC2.79□□□□□ -1.96
PDGFBP01127 AC093591.1-201ENST00000491435 481 ntBASIC2.79□□□□□ -1.96
PDGFBP01127 RPL21P16-201ENST00000495531 483 ntBASIC2.79□□□□□ -1.96
PDGFBP01127 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.79□□□□□ -1.96
PDGFBP01127 MTND5P13-201ENST00000513046 1079 ntBASIC2.79□□□□□ -1.96
PDGFBP01127 AC096725.1-201ENST00000514266 313 ntBASIC2.79□□□□□ -1.96
PDGFBP01127 RNU6-927P-201ENST00000516199 100 ntBASIC2.79□□□□□ -1.96
PDGFBP01127 RNU1-143P-201ENST00000516296 146 ntBASIC2.79□□□□□ -1.96
PDGFBP01127 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.79□□□□□ -1.96
PDGFBP01127 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PDGFBP01127 HSPE1P20-201ENST00000538133 289 ntBASIC2.79□□□□□ -1.96
PDGFBP01127 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.79□□□□□ -1.96
PDGFBP01127 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.79□□□□□ -1.96
PDGFBP01127 AC093012.1-202ENST00000549403 582 ntBASIC2.79□□□□□ -1.96
PDGFBP01127 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.79□□□□□ -1.96
PDGFBP01127 Z94722.1-201ENST00000604328 474 ntBASIC2.79□□□□□ -1.96
PDGFBP01127 AC108747.1-201ENST00000609508 535 ntBASIC2.79□□□□□ -1.96
PDGFBP01127 AC103710.1-201ENST00000610003 901 ntBASIC2.79□□□□□ -1.96
PDGFBP01127 U1.23-201ENST00000610293 146 ntBASIC2.79□□□□□ -1.96
PDGFBP01127 RNU1-68P-201ENST00000615382 146 ntBASIC2.79□□□□□ -1.96
PDGFBP01127 U1.39-201ENST00000621562 146 ntBASIC2.79□□□□□ -1.96
PDGFBP01127 AC004972.1-201ENST00000623934 2209 ntBASIC2.78□□□□□ -1.96
PDGFBP01127 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.78□□□□□ -1.96
PDGFBP01127 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
PDGFBP01127 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PDGFBP01127 MIR148B-201ENST00000362252 99 ntBASIC2.78□□□□□ -1.96
PDGFBP01127 RNY4P16-201ENST00000364768 94 ntBASIC2.78□□□□□ -1.96
PDGFBP01127 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.78□□□□□ -1.96
PDGFBP01127 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.78□□□□□ -1.96
PDGFBP01127 MIR19A-201ENST00000384878 82 ntBASIC2.78□□□□□ -1.96
PDGFBP01127 RN7SKP192-201ENST00000411291 327 ntBASIC2.78□□□□□ -1.96
PDGFBP01127 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.78□□□□□ -1.96
PDGFBP01127 RPL21P24-201ENST00000413752 448 ntBASIC2.78□□□□□ -1.96
PDGFBP01127 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.78□□□□□ -1.96
PDGFBP01127 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.78□□□□□ -1.96
PDGFBP01127 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.78□□□□□ -1.96
PDGFBP01127 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.78□□□□□ -1.96
PDGFBP01127 GTF2IP20-201ENST00000431663 360 ntBASIC2.78□□□□□ -1.96
PDGFBP01127 ELOCP30-201ENST00000447108 299 ntBASIC2.78□□□□□ -1.96
PDGFBP01127 USP9YP12-201ENST00000450481 570 ntBASIC2.78□□□□□ -1.96
PDGFBP01127 SNRPGP9-201ENST00000456025 225 ntBASIC2.78□□□□□ -1.96
PDGFBP01127 RPL37P6-201ENST00000460682 294 ntBASIC2.78□□□□□ -1.96
PDGFBP01127 MRPS17P3-201ENST00000465453 385 ntBASIC2.78□□□□□ -1.96
PDGFBP01127 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.78□□□□□ -1.96
PDGFBP01127 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.78□□□□□ -1.96
PDGFBP01127 AC117532.1-201ENST00000514638 323 ntBASIC2.78□□□□□ -1.96
PDGFBP01127 RNA5SP290-201ENST00000517133 127 ntBASIC2.78□□□□□ -1.96
PDGFBP01127 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.78□□□□□ -1.96
PDGFBP01127 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.78□□□□□ -1.96
PDGFBP01127 AP003181.2-201ENST00000528941 181 ntBASIC2.78□□□□□ -1.96
PDGFBP01127 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.78□□□□□ -1.96
PDGFBP01127 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.78□□□□□ -1.96
PDGFBP01127 AP000857.1-201ENST00000532151 543 ntBASIC2.78□□□□□ -1.96
PDGFBP01127 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.78□□□□□ -1.96
PDGFBP01127 AC123904.3-201ENST00000547218 814 ntBASIC2.78□□□□□ -1.96
PDGFBP01127 AL133153.1-201ENST00000557756 303 ntBASIC2.78□□□□□ -1.96
PDGFBP01127 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.78□□□□□ -1.96
PDGFBP01127 AL356432.3-201ENST00000568952 465 ntBASIC2.78□□□□□ -1.96
PDGFBP01127 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.78□□□□□ -1.96
PDGFBP01127 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.78□□□□□ -1.96
PDGFBP01127 AC012065.4-201ENST00000602445 679 ntBASIC2.78□□□□□ -1.96
PDGFBP01127 AC131902.3-201ENST00000611767 581 ntBASIC2.78□□□□□ -1.96
PDGFBP01127 AC004696.1-201ENST00000614345 607 ntBASIC2.78□□□□□ -1.96
PDGFBP01127 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.78□□□□□ -1.96
PDGFBP01127 ELL2P3-201ENST00000457883 1602 ntBASIC2.78□□□□□ -1.96
PDGFBP01127 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PDGFBP01127 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PDGFBP01127 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
PDGFBP01127 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PDGFBP01127 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PDGFBP01127 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PDGFBP01127 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PDGFBP01127 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.77□□□□□ -1.97
PDGFBP01127 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PDGFBP01127 RN7SKP123-201ENST00000410732 291 ntBASIC2.77□□□□□ -1.97
PDGFBP01127 RNU4-53P-201ENST00000410828 140 ntBASIC2.77□□□□□ -1.97
PDGFBP01127 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.77□□□□□ -1.97
PDGFBP01127 BTF3L4P3-201ENST00000418879 476 ntBASIC2.77□□□□□ -1.97
PDGFBP01127 RPS15AP12-201ENST00000419498 388 ntBASIC2.77□□□□□ -1.97
PDGFBP01127 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.77□□□□□ -1.97
PDGFBP01127 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.77□□□□□ -1.97
PDGFBP01127 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.77□□□□□ -1.97
PDGFBP01127 ISCA1P6-201ENST00000427740 390 ntBASIC2.77□□□□□ -1.97
PDGFBP01127 AL139415.2-201ENST00000431968 163 ntBASIC2.77□□□□□ -1.97
PDGFBP01127 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.77□□□□□ -1.97
PDGFBP01127 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.77□□□□□ -1.97
PDGFBP01127 AL590639.1-201ENST00000456484 337 ntBASIC2.77□□□□□ -1.97
PDGFBP01127 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.77□□□□□ -1.97
PDGFBP01127 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.77□□□□□ -1.97
PDGFBP01127 RPL36AP51-201ENST00000487216 318 ntBASIC2.77□□□□□ -1.97
PDGFBP01127 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PDGFBP01127 SUMO2P6-201ENST00000505273 288 ntBASIC2.77□□□□□ -1.97
PDGFBP01127 MTND1P22-201ENST00000510572 951 ntBASIC2.77□□□□□ -1.97
PDGFBP01127 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.77□□□□□ -1.97
PDGFBP01127 Y_RNA.688-201ENST00000516565 95 ntBASIC2.77□□□□□ -1.97
PDGFBP01127 RN7SKP40-201ENST00000517211 242 ntBASIC2.77□□□□□ -1.97
PDGFBP01127 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.77□□□□□ -1.97
PDGFBP01127 AC100870.1-201ENST00000522035 505 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms