Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.65□□□□□ -1.83
TOP3BO95985 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TOP3BO95985 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.64□□□□□ -1.83
TOP3BO95985 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
TOP3BO95985 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TOP3BO95985 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.64□□□□□ -1.83
TOP3BO95985 RNA5SP42-201ENST00000364278 115 ntBASIC3.64□□□□□ -1.83
TOP3BO95985 RNA5SP167-201ENST00000365461 116 ntBASIC3.64□□□□□ -1.83
TOP3BO95985 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TOP3BO95985 RNU6-738P-201ENST00000384531 106 ntBASIC3.64□□□□□ -1.83
TOP3BO95985 MIR454-201ENST00000390180 115 ntBASIC3.64□□□□□ -1.83
TOP3BO95985 Y_RNA.579-201ENST00000390939 94 ntBASIC3.64□□□□□ -1.83
TOP3BO95985 SNORA75.4-201ENST00000391278 119 ntBASIC3.64□□□□□ -1.83
TOP3BO95985 MIR548P-201ENST00000408336 84 ntBASIC3.64□□□□□ -1.83
TOP3BO95985 RNU4-26P-201ENST00000410270 107 ntBASIC3.64□□□□□ -1.83
TOP3BO95985 RNU6-516P-201ENST00000411381 104 ntBASIC3.64□□□□□ -1.83
TOP3BO95985 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.64□□□□□ -1.83
TOP3BO95985 AL451054.2-201ENST00000420896 202 ntBASIC3.64□□□□□ -1.83
TOP3BO95985 HSPE1P1-201ENST00000421494 318 ntBASIC3.64□□□□□ -1.83
TOP3BO95985 BEND7P1-201ENST00000422058 457 ntBASIC3.64□□□□□ -1.83
TOP3BO95985 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.64□□□□□ -1.83
TOP3BO95985 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.64□□□□□ -1.83
TOP3BO95985 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.64□□□□□ -1.83
TOP3BO95985 HMGN2P21-201ENST00000447764 270 ntBASIC3.64□□□□□ -1.83
TOP3BO95985 AL590639.1-201ENST00000456484 337 ntBASIC3.64□□□□□ -1.83
TOP3BO95985 AL049714.1-201ENST00000466686 347 ntBASIC3.64□□□□□ -1.83
TOP3BO95985 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.64□□□□□ -1.83
TOP3BO95985 AC004062.1-201ENST00000509926 645 ntBASIC3.64□□□□□ -1.83
TOP3BO95985 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.64□□□□□ -1.83
TOP3BO95985 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.64□□□□□ -1.83
TOP3BO95985 RNU6-1095P-201ENST00000516148 108 ntBASIC3.64□□□□□ -1.83
TOP3BO95985 RN7SKP219-201ENST00000516825 296 ntBASIC3.64□□□□□ -1.83
TOP3BO95985 AC103783.1-201ENST00000520506 373 ntBASIC3.64□□□□□ -1.83
TOP3BO95985 AP000857.1-201ENST00000532151 543 ntBASIC3.64□□□□□ -1.83
TOP3BO95985 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.64□□□□□ -1.83
TOP3BO95985 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.64□□□□□ -1.83
TOP3BO95985 MIR3171-201ENST00000584270 74 ntBASIC3.64□□□□□ -1.83
TOP3BO95985 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.64□□□□□ -1.83
TOP3BO95985 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.64□□□□□ -1.83
TOP3BO95985 AC006254.3-201ENST00000603353 884 ntBASIC3.64□□□□□ -1.83
TOP3BO95985 AC103710.2-201ENST00000609912 942 ntBASIC3.64□□□□□ -1.83
TOP3BO95985 RMST_8.1-201ENST00000610287 165 ntBASIC3.64□□□□□ -1.83
TOP3BO95985 AC245517.5-201ENST00000611529 162 ntBASIC3.64□□□□□ -1.83
TOP3BO95985 AL355365.1-201ENST00000616480 294 ntBASIC3.64□□□□□ -1.83
TOP3BO95985 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.64□□□□□ -1.83
TOP3BO95985 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.64□□□□□ -1.83
TOP3BO95985 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.64□□□□□ -1.83
TOP3BO95985 AL133216.2-202ENST00000634512 349 ntBASIC3.64□□□□□ -1.83
TOP3BO95985 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.64□□□□□ -1.83
TOP3BO95985 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TOP3BO95985 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.64□□□□□ -1.83
TOP3BO95985 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TOP3BO95985 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.64□□□□□ -1.83
TOP3BO95985 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TOP3BO95985 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TOP3BO95985 AC007823.1-201ENST00000569932 1566 ntBASIC3.63□□□□□ -1.83
TOP3BO95985 AL049781.1-201ENST00000623195 3585 ntBASIC3.63□□□□□ -1.83
TOP3BO95985 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.63□□□□□ -1.83
TOP3BO95985 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TOP3BO95985 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TOP3BO95985 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.63□□□□□ -1.83
TOP3BO95985 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.63□□□□□ -1.83
TOP3BO95985 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
TOP3BO95985 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.63□□□□□ -1.83
TOP3BO95985 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TOP3BO95985 AC073343.1-201ENST00000328239 651 ntBASIC3.63□□□□□ -1.83
TOP3BO95985 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.63□□□□□ -1.83
TOP3BO95985 Y_RNA.100-201ENST00000363141 102 ntBASIC3.63□□□□□ -1.83
TOP3BO95985 RNU1-33P-201ENST00000364249 162 ntBASIC3.63□□□□□ -1.83
TOP3BO95985 SNORA63C-201ENST00000364578 129 ntBASIC3.63□□□□□ -1.83
TOP3BO95985 Y_RNA.259-201ENST00000364619 101 ntBASIC3.63□□□□□ -1.83
TOP3BO95985 RNU6-637P-201ENST00000384050 107 ntBASIC3.63□□□□□ -1.83
TOP3BO95985 RNU6-432P-201ENST00000384196 109 ntBASIC3.63□□□□□ -1.83
TOP3BO95985 RNU6-301P-201ENST00000384277 107 ntBASIC3.63□□□□□ -1.83
TOP3BO95985 MIR558-201ENST00000384920 94 ntBASIC3.63□□□□□ -1.83
TOP3BO95985 UBA52P6-201ENST00000399822 382 ntBASIC3.63□□□□□ -1.83
TOP3BO95985 RNU2-62P-201ENST00000410868 191 ntBASIC3.63□□□□□ -1.83
TOP3BO95985 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.63□□□□□ -1.83
TOP3BO95985 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.63□□□□□ -1.83
TOP3BO95985 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.63□□□□□ -1.83
TOP3BO95985 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.63□□□□□ -1.83
TOP3BO95985 RPL35AP22-201ENST00000436855 335 ntBASIC3.63□□□□□ -1.83
TOP3BO95985 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.63□□□□□ -1.83
TOP3BO95985 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.63□□□□□ -1.83
TOP3BO95985 CEACAMP4-201ENST00000457676 421 ntBASIC3.63□□□□□ -1.83
TOP3BO95985 RNU7-59P-201ENST00000459101 61 ntBASIC3.63□□□□□ -1.83
TOP3BO95985 AP001086.1-201ENST00000494882 321 ntBASIC3.63□□□□□ -1.83
TOP3BO95985 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.63□□□□□ -1.83
TOP3BO95985 AC026784.1-201ENST00000507986 352 ntBASIC3.63□□□□□ -1.83
TOP3BO95985 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.63□□□□□ -1.83
TOP3BO95985 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.63□□□□□ -1.83
TOP3BO95985 NDUFB9P3-201ENST00000521269 501 ntBASIC3.63□□□□□ -1.83
TOP3BO95985 HMGN1P28-201ENST00000521340 364 ntBASIC3.63□□□□□ -1.83
TOP3BO95985 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.63□□□□□ -1.83
TOP3BO95985 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.63□□□□□ -1.83
TOP3BO95985 AC011979.2-201ENST00000527568 352 ntBASIC3.63□□□□□ -1.83
TOP3BO95985 AC103843.2-201ENST00000530523 682 ntBASIC3.63□□□□□ -1.83
TOP3BO95985 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.63□□□□□ -1.83
TOP3BO95985 AC128657.1-201ENST00000549459 145 ntBASIC3.63□□□□□ -1.83
TOP3BO95985 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms