Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.19□□□□□ -1.9
SYNCRIPO60506 AC010680.1-201ENST00000590024 3590 ntBASIC3.19□□□□□ -1.9
SYNCRIPO60506 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SYNCRIPO60506 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SYNCRIPO60506 OR5J1P-201ENST00000313544 939 ntBASIC3.19□□□□□ -1.9
SYNCRIPO60506 Y_RNA.6-201ENST00000362350 114 ntBASIC3.19□□□□□ -1.9
SYNCRIPO60506 RNU6-511P-201ENST00000363496 107 ntBASIC3.19□□□□□ -1.9
SYNCRIPO60506 SNORA71.1-201ENST00000364523 117 ntBASIC3.19□□□□□ -1.9
SYNCRIPO60506 RNY4P16-201ENST00000364768 94 ntBASIC3.19□□□□□ -1.9
SYNCRIPO60506 RNA5SP126-201ENST00000365092 109 ntBASIC3.19□□□□□ -1.9
SYNCRIPO60506 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.19□□□□□ -1.9
SYNCRIPO60506 RNU6-1215P-201ENST00000384441 102 ntBASIC3.19□□□□□ -1.9
SYNCRIPO60506 Y_RNA.516-201ENST00000384541 124 ntBASIC3.19□□□□□ -1.9
SYNCRIPO60506 RNA5SP229-201ENST00000410809 99 ntBASIC3.19□□□□□ -1.9
SYNCRIPO60506 Y_RNA.619-201ENST00000410951 90 ntBASIC3.19□□□□□ -1.9
SYNCRIPO60506 ELOCP17-201ENST00000414751 326 ntBASIC3.19□□□□□ -1.9
SYNCRIPO60506 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.19□□□□□ -1.9
SYNCRIPO60506 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.19□□□□□ -1.9
SYNCRIPO60506 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.19□□□□□ -1.9
SYNCRIPO60506 MTCO3P45-201ENST00000443036 613 ntBASIC3.19□□□□□ -1.9
SYNCRIPO60506 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.19□□□□□ -1.9
SYNCRIPO60506 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.19□□□□□ -1.9
SYNCRIPO60506 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.19□□□□□ -1.9
SYNCRIPO60506 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.19□□□□□ -1.9
SYNCRIPO60506 AL135752.1-201ENST00000479477 471 ntBASIC3.19□□□□□ -1.9
SYNCRIPO60506 HMGB1P29-201ENST00000505659 499 ntBASIC3.19□□□□□ -1.9
SYNCRIPO60506 RNA5SP337-201ENST00000517007 109 ntBASIC3.19□□□□□ -1.9
SYNCRIPO60506 RNA5SP380-201ENST00000517190 98 ntBASIC3.19□□□□□ -1.9
SYNCRIPO60506 NRON-201ENST00000517270 370 ntBASIC3.19□□□□□ -1.9
SYNCRIPO60506 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.19□□□□□ -1.9
SYNCRIPO60506 AC009812.2-201ENST00000517657 457 ntBASIC3.19□□□□□ -1.9
SYNCRIPO60506 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.19□□□□□ -1.9
SYNCRIPO60506 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.19□□□□□ -1.9
SYNCRIPO60506 MIR4293-201ENST00000584305 78 ntBASIC3.19□□□□□ -1.9
SYNCRIPO60506 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.19□□□□□ -1.9
SYNCRIPO60506 AC093732.2-201ENST00000607950 274 ntBASIC3.19□□□□□ -1.9
SYNCRIPO60506 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.19□□□□□ -1.9
SYNCRIPO60506 AC073534.2-201ENST00000620377 381 ntBASIC3.19□□□□□ -1.9
SYNCRIPO60506 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.19□□□□□ -1.9
SYNCRIPO60506 AC110994.2-201ENST00000635481 492 ntBASIC3.19□□□□□ -1.9
SYNCRIPO60506 AC099654.7-201ENST00000635788 2127 ntBASIC3.19□□□□□ -1.9
SYNCRIPO60506 U3.11-201ENST00000364476 212 ntBASIC3.18□□□□□ -1.9
SYNCRIPO60506 RNY3P13-201ENST00000365542 102 ntBASIC3.18□□□□□ -1.9
SYNCRIPO60506 RNU6-278P-201ENST00000390945 109 ntBASIC3.18□□□□□ -1.9
SYNCRIPO60506 RNU6-195P-201ENST00000411352 109 ntBASIC3.18□□□□□ -1.9
SYNCRIPO60506 RPL21P24-201ENST00000413752 448 ntBASIC3.18□□□□□ -1.9
SYNCRIPO60506 MTCO3P30-201ENST00000426425 670 ntBASIC3.18□□□□□ -1.9
SYNCRIPO60506 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.18□□□□□ -1.9
SYNCRIPO60506 AC137499.1-201ENST00000427602 88 ntBASIC3.18□□□□□ -1.9
SYNCRIPO60506 ISCA1P6-201ENST00000427740 390 ntBASIC3.18□□□□□ -1.9
SYNCRIPO60506 C8orf59P1-201ENST00000429930 303 ntBASIC3.18□□□□□ -1.9
SYNCRIPO60506 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.18□□□□□ -1.9
SYNCRIPO60506 Z82210.1-201ENST00000440037 231 ntBASIC3.18□□□□□ -1.9
SYNCRIPO60506 PIGFP3-201ENST00000441918 722 ntBASIC3.18□□□□□ -1.9
SYNCRIPO60506 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.18□□□□□ -1.9
SYNCRIPO60506 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.18□□□□□ -1.9
SYNCRIPO60506 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.18□□□□□ -1.9
SYNCRIPO60506 AC132479.1-201ENST00000449160 144 ntBASIC3.18□□□□□ -1.9
SYNCRIPO60506 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.18□□□□□ -1.9
SYNCRIPO60506 AC107401.1-201ENST00000503426 685 ntBASIC3.18□□□□□ -1.9
SYNCRIPO60506 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.18□□□□□ -1.9
SYNCRIPO60506 AC008885.1-201ENST00000514930 301 ntBASIC3.18□□□□□ -1.9
SYNCRIPO60506 RNA5SP217-201ENST00000515959 91 ntBASIC3.18□□□□□ -1.9
SYNCRIPO60506 Y_RNA.673-201ENST00000516306 88 ntBASIC3.18□□□□□ -1.9
SYNCRIPO60506 AC245166.1-201ENST00000521012 253 ntBASIC3.18□□□□□ -1.9
SYNCRIPO60506 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.18□□□□□ -1.9
SYNCRIPO60506 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.18□□□□□ -1.9
SYNCRIPO60506 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.18□□□□□ -1.9
SYNCRIPO60506 TRAV28-201ENST00000557548 323 ntBASIC3.18□□□□□ -1.9
SYNCRIPO60506 AC004832.5-201ENST00000608677 401 ntBASIC3.18□□□□□ -1.9
SYNCRIPO60506 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.18□□□□□ -1.9
SYNCRIPO60506 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.18□□□□□ -1.9
SYNCRIPO60506 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SYNCRIPO60506 AC138649.3-201ENST00000622154 254 ntBASIC3.18□□□□□ -1.9
SYNCRIPO60506 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.18□□□□□ -1.9
SYNCRIPO60506 OR5AK4P-201ENST00000635912 903 ntBASIC3.18□□□□□ -1.9
SYNCRIPO60506 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SYNCRIPO60506 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SYNCRIPO60506 AC000403.1-201ENST00000613696 3585 ntBASIC3.18□□□□□ -1.9
SYNCRIPO60506 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.18□□□□□ -1.9
SYNCRIPO60506 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SYNCRIPO60506 RNU6-270P-201ENST00000364131 105 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 RNU6-169P-201ENST00000365336 107 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 RPS3AP36-201ENST00000398190 775 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 GSTA9P-201ENST00000406231 611 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 RNU6-648P-201ENST00000410190 107 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 AL513331.1-201ENST00000411908 397 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 RPL32P35-201ENST00000415214 394 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 BX295541.1-201ENST00000417774 250 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 AL645937.1-202ENST00000421799 937 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 AC133104.1-201ENST00000429100 218 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 USP12PX-201ENST00000432383 1057 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 AC009969.1-201ENST00000438726 172 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 RPL23AP58-201ENST00000440453 469 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 C1DP4-201ENST00000455429 424 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 RPS3AP17-201ENST00000472594 777 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 KC877373.1-201ENST00000479066 408 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.17□□□□□ -1.9
SYNCRIPO60506 RPL9P6-201ENST00000492764 598 ntBASIC3.17□□□□□ -1.9
SYNCRIPO60506 RAC1P5-201ENST00000512182 576 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms