Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 RPS27AP1-201ENST00000475545 471 ntBASIC4.56□□□□□ -1.68
SRGAP3O43295 AP002812.1-201ENST00000495378 474 ntBASIC4.56□□□□□ -1.68
SRGAP3O43295 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.56□□□□□ -1.68
SRGAP3O43295 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.56□□□□□ -1.68
SRGAP3O43295 AC097473.1-201ENST00000508142 408 ntBASIC4.56□□□□□ -1.68
SRGAP3O43295 RNU6-123P-201ENST00000516163 102 ntBASIC4.56□□□□□ -1.68
SRGAP3O43295 RNU6-794P-201ENST00000517261 64 ntBASIC4.56□□□□□ -1.68
SRGAP3O43295 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.56□□□□□ -1.68
SRGAP3O43295 SETP7-201ENST00000552169 453 ntBASIC4.56□□□□□ -1.68
SRGAP3O43295 AL161670.1-201ENST00000554348 137 ntBASIC4.56□□□□□ -1.68
SRGAP3O43295 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.56□□□□□ -1.68
SRGAP3O43295 RPL23AP84-201ENST00000571193 464 ntBASIC4.56□□□□□ -1.68
SRGAP3O43295 MIR1254-2-201ENST00000579553 63 ntBASIC4.56□□□□□ -1.68
SRGAP3O43295 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.56□□□□□ -1.68
SRGAP3O43295 AC008521.1-201ENST00000587471 187 ntBASIC4.56□□□□□ -1.68
SRGAP3O43295 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.56□□□□□ -1.68
SRGAP3O43295 AC006133.1-201ENST00000617106 264 ntBASIC4.56□□□□□ -1.68
SRGAP3O43295 PLCE1P1-201ENST00000622094 305 ntBASIC4.56□□□□□ -1.68
SRGAP3O43295 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SRGAP3O43295 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SRGAP3O43295 AC006504.1-201ENST00000562493 3666 ntBASIC4.56□□□□□ -1.68
SRGAP3O43295 MTND5P30-201ENST00000452896 1731 ntBASIC4.55□□□□□ -1.68
SRGAP3O43295 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SRGAP3O43295 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.55□□□□□ -1.68
SRGAP3O43295 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SRGAP3O43295 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.55□□□□□ -1.68
SRGAP3O43295 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SRGAP3O43295 CDC27P3-201ENST00000635418 1910 ntBASIC4.55□□□□□ -1.68
SRGAP3O43295 SNORD70.1-201ENST00000391007 85 ntBASIC4.55□□□□□ -1.68
SRGAP3O43295 PTMAP2-201ENST00000397627 327 ntBASIC4.55□□□□□ -1.68
SRGAP3O43295 ATP5A1P2-201ENST00000412323 255 ntBASIC4.55□□□□□ -1.68
SRGAP3O43295 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.55□□□□□ -1.68
SRGAP3O43295 AC096644.2-201ENST00000429278 159 ntBASIC4.55□□□□□ -1.68
SRGAP3O43295 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.55□□□□□ -1.68
SRGAP3O43295 RPS3AP46-201ENST00000448352 682 ntBASIC4.55□□□□□ -1.68
SRGAP3O43295 BX276092.4-201ENST00000452056 248 ntBASIC4.55□□□□□ -1.68
SRGAP3O43295 AC234775.1-201ENST00000454247 670 ntBASIC4.55□□□□□ -1.68
SRGAP3O43295 AC007967.1-201ENST00000455422 1159 ntBASIC4.55□□□□□ -1.68
SRGAP3O43295 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC4.55□□□□□ -1.68
SRGAP3O43295 TRBV1-201ENST00000476502 284 ntBASIC4.55□□□□□ -1.68
SRGAP3O43295 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.55□□□□□ -1.68
SRGAP3O43295 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.55□□□□□ -1.68
SRGAP3O43295 AC116337.1-201ENST00000509680 687 ntBASIC4.55□□□□□ -1.68
SRGAP3O43295 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.55□□□□□ -1.68
SRGAP3O43295 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.55□□□□□ -1.68
SRGAP3O43295 AP002404.1-201ENST00000532005 451 ntBASIC4.55□□□□□ -1.68
SRGAP3O43295 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.55□□□□□ -1.68
SRGAP3O43295 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SRGAP3O43295 MTCO3P23-201ENST00000561363 289 ntBASIC4.55□□□□□ -1.68
SRGAP3O43295 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.55□□□□□ -1.68
SRGAP3O43295 HNRNPCP4-201ENST00000571636 900 ntBASIC4.55□□□□□ -1.68
SRGAP3O43295 AL138889.2-201ENST00000603883 242 ntBASIC4.55□□□□□ -1.68
SRGAP3O43295 AL158032.1-201ENST00000605401 106 ntBASIC4.55□□□□□ -1.68
SRGAP3O43295 FAM157A-202ENST00000615155 405 ntBASIC4.55□□□□□ -1.68
SRGAP3O43295 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SRGAP3O43295 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.55□□□□□ -1.68
SRGAP3O43295 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.55□□□□□ -1.68
SRGAP3O43295 NCAPGP1-201ENST00000505112 1814 ntBASIC4.55□□□□□ -1.68
SRGAP3O43295 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
SRGAP3O43295 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SRGAP3O43295 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SRGAP3O43295 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SRGAP3O43295 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SRGAP3O43295 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
SRGAP3O43295 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
SRGAP3O43295 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.54□□□□□ -1.68
SRGAP3O43295 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SRGAP3O43295 AC007685.1-201ENST00000329806 452 ntBASIC4.54□□□□□ -1.68
SRGAP3O43295 RNU6-1284P-201ENST00000363701 100 ntBASIC4.54□□□□□ -1.68
SRGAP3O43295 RNU6-946P-201ENST00000383878 107 ntBASIC4.54□□□□□ -1.68
SRGAP3O43295 Y_RNA.463-201ENST00000384271 102 ntBASIC4.54□□□□□ -1.68
SRGAP3O43295 RNU6-339P-201ENST00000384310 107 ntBASIC4.54□□□□□ -1.68
SRGAP3O43295 Y_RNA.473-201ENST00000384333 102 ntBASIC4.54□□□□□ -1.68
SRGAP3O43295 RNA5SP111-201ENST00000411386 101 ntBASIC4.54□□□□□ -1.68
SRGAP3O43295 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.54□□□□□ -1.68
SRGAP3O43295 RPL21P109-201ENST00000422213 475 ntBASIC4.54□□□□□ -1.68
SRGAP3O43295 USP9YP16-201ENST00000430287 407 ntBASIC4.54□□□□□ -1.68
SRGAP3O43295 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.54□□□□□ -1.68
SRGAP3O43295 RPL21P23-201ENST00000446654 460 ntBASIC4.54□□□□□ -1.68
SRGAP3O43295 USP9YP23-201ENST00000455085 407 ntBASIC4.54□□□□□ -1.68
SRGAP3O43295 AC008481.1-201ENST00000463278 396 ntBASIC4.54□□□□□ -1.68
SRGAP3O43295 HMGB1P30-201ENST00000492455 606 ntBASIC4.54□□□□□ -1.68
SRGAP3O43295 IGKV2D-36-201ENST00000518643 226 ntBASIC4.54□□□□□ -1.68
SRGAP3O43295 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.54□□□□□ -1.68
SRGAP3O43295 AL670379.6-201ENST00000603753 252 ntBASIC4.54□□□□□ -1.68
SRGAP3O43295 AL670379.1-201ENST00000604752 252 ntBASIC4.54□□□□□ -1.68
SRGAP3O43295 AL670379.5-201ENST00000605253 252 ntBASIC4.54□□□□□ -1.68
SRGAP3O43295 AL670379.8-201ENST00000605353 252 ntBASIC4.54□□□□□ -1.68
SRGAP3O43295 AL670379.7-201ENST00000605823 252 ntBASIC4.54□□□□□ -1.68
SRGAP3O43295 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.54□□□□□ -1.68
SRGAP3O43295 AC009229.3-201ENST00000608056 282 ntBASIC4.54□□□□□ -1.68
SRGAP3O43295 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.54□□□□□ -1.68
SRGAP3O43295 AL732372.2-225ENST00000642124 456 ntBASIC4.54□□□□□ -1.68
SRGAP3O43295 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SRGAP3O43295 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.54□□□□□ -1.68
SRGAP3O43295 AC103710.2-202ENST00000641454 2853 ntBASIC4.54□□□□□ -1.68
SRGAP3O43295 AC093775.1-201ENST00000624154 1868 ntBASIC4.54□□□□□ -1.68
SRGAP3O43295 MTCO1P24-201ENST00000515438 1558 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 SNORD3E-201ENST00000362899 217 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 Y_RNA.176-201ENST00000363815 109 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms