Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC093591.2-201ENST00000565254 3843 ntBASIC4.78□□□□□ -1.64
SOX1O00570 FTX_2.1-201ENST00000618816 94 ntBASIC4.78□□□□□ -1.64
SOX1O00570 MIR6852-201ENST00000621699 66 ntBASIC4.78□□□□□ -1.64
SOX1O00570 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.78□□□□□ -1.64
SOX1O00570 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SOX1O00570 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SOX1O00570 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
SOX1O00570 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SOX1O00570 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.78□□□□□ -1.64
SOX1O00570 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.78□□□□□ -1.64
SOX1O00570 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.65
SOX1O00570 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SOX1O00570 AC008079.2-201ENST00000623543 20396 ntBASIC4.77□□□□□ -1.65
SOX1O00570 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SOX1O00570 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SOX1O00570 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SOX1O00570 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SOX1O00570 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.77□□□□□ -1.65
SOX1O00570 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SOX1O00570 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
SOX1O00570 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.77□□□□□ -1.65
SOX1O00570 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SOX1O00570 Y_RNA.29-201ENST00000362570 113 ntBASIC4.77□□□□□ -1.65
SOX1O00570 Y_RNA.105-201ENST00000363182 111 ntBASIC4.77□□□□□ -1.65
SOX1O00570 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
SOX1O00570 SNORA36C-201ENST00000384289 132 ntBASIC4.77□□□□□ -1.65
SOX1O00570 RNU6-121P-201ENST00000410525 99 ntBASIC4.77□□□□□ -1.65
SOX1O00570 RPL21P38-201ENST00000418090 167 ntBASIC4.77□□□□□ -1.65
SOX1O00570 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.77□□□□□ -1.65
SOX1O00570 AL592045.1-201ENST00000429867 352 ntBASIC4.77□□□□□ -1.65
SOX1O00570 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.77□□□□□ -1.65
SOX1O00570 AC090602.1-201ENST00000469695 252 ntBASIC4.77□□□□□ -1.65
SOX1O00570 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.77□□□□□ -1.65
SOX1O00570 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.77□□□□□ -1.65
SOX1O00570 RNU1-86P-201ENST00000516108 154 ntBASIC4.77□□□□□ -1.65
SOX1O00570 SNORA31.6-201ENST00000516241 130 ntBASIC4.77□□□□□ -1.65
SOX1O00570 RNU5B-3P-201ENST00000516601 115 ntBASIC4.77□□□□□ -1.65
SOX1O00570 RNU1-107P-201ENST00000516617 154 ntBASIC4.77□□□□□ -1.65
SOX1O00570 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.77□□□□□ -1.65
SOX1O00570 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.77□□□□□ -1.65
SOX1O00570 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.77□□□□□ -1.65
SOX1O00570 FKBP1BP1-201ENST00000553366 325 ntBASIC4.77□□□□□ -1.65
SOX1O00570 TRAV37-201ENST00000553906 342 ntBASIC4.77□□□□□ -1.65
SOX1O00570 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.77□□□□□ -1.65
SOX1O00570 AC022884.2-201ENST00000578535 580 ntBASIC4.77□□□□□ -1.65
SOX1O00570 AP000787.2-201ENST00000604432 568 ntBASIC4.77□□□□□ -1.65
SOX1O00570 AC123912.5-201ENST00000605470 343 ntBASIC4.77□□□□□ -1.65
SOX1O00570 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.77□□□□□ -1.65
SOX1O00570 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.77□□□□□ -1.65
SOX1O00570 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SOX1O00570 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SOX1O00570 AC073136.1-201ENST00000449426 2884 ntBASIC4.77□□□□□ -1.65
SOX1O00570 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SOX1O00570 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SOX1O00570 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
SOX1O00570 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.76□□□□□ -1.65
SOX1O00570 Z75746.1-201ENST00000440243 2080 ntBASIC4.76□□□□□ -1.65
SOX1O00570 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
SOX1O00570 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SOX1O00570 Y_RNA.84-201ENST00000363011 104 ntBASIC4.76□□□□□ -1.65
SOX1O00570 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.76□□□□□ -1.65
SOX1O00570 Y_RNA.462-201ENST00000384268 102 ntBASIC4.76□□□□□ -1.65
SOX1O00570 Y_RNA.539-201ENST00000384635 107 ntBASIC4.76□□□□□ -1.65
SOX1O00570 AL513331.1-201ENST00000411908 397 ntBASIC4.76□□□□□ -1.65
SOX1O00570 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.76□□□□□ -1.65
SOX1O00570 COX6B1P7-201ENST00000430845 235 ntBASIC4.76□□□□□ -1.65
SOX1O00570 AL159987.2-201ENST00000432754 307 ntBASIC4.76□□□□□ -1.65
SOX1O00570 RPS20P1-201ENST00000434853 354 ntBASIC4.76□□□□□ -1.65
SOX1O00570 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.76□□□□□ -1.65
SOX1O00570 HSPD1P21-201ENST00000436541 245 ntBASIC4.76□□□□□ -1.65
SOX1O00570 RPL12P18-201ENST00000437175 325 ntBASIC4.76□□□□□ -1.65
SOX1O00570 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.76□□□□□ -1.65
SOX1O00570 AP001486.1-201ENST00000463339 476 ntBASIC4.76□□□□□ -1.65
SOX1O00570 AC098869.1-201ENST00000481627 292 ntBASIC4.76□□□□□ -1.65
SOX1O00570 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.76□□□□□ -1.65
SOX1O00570 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.76□□□□□ -1.65
SOX1O00570 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.76□□□□□ -1.65
SOX1O00570 RNU6-1315P-201ENST00000517187 99 ntBASIC4.76□□□□□ -1.65
SOX1O00570 RN7SKP289-201ENST00000517244 295 ntBASIC4.76□□□□□ -1.65
SOX1O00570 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.76□□□□□ -1.65
SOX1O00570 AC009643.2-201ENST00000603543 1448 ntBASIC4.76□□□□□ -1.65
SOX1O00570 AP001282.2-201ENST00000616149 309 ntBASIC4.76□□□□□ -1.65
SOX1O00570 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.76□□□□□ -1.65
SOX1O00570 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SOX1O00570 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SOX1O00570 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
SOX1O00570 MTND5P9-201ENST00000503854 1755 ntBASIC4.76□□□□□ -1.65
SOX1O00570 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SOX1O00570 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SOX1O00570 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.75□□□□□ -1.65
SOX1O00570 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SOX1O00570 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SOX1O00570 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
SOX1O00570 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SOX1O00570 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.75□□□□□ -1.65
SOX1O00570 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SOX1O00570 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.75□□□□□ -1.65
SOX1O00570 AL391987.6-201ENST00000305671 199 ntBASIC4.75□□□□□ -1.65
SOX1O00570 MIR521-1-201ENST00000384902 87 ntBASIC4.75□□□□□ -1.65
SOX1O00570 MIR183-201ENST00000384958 110 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms