Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.6□□□□□ -2.31
CPSF4LA6NMK7 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.6□□□□□ -2.31
CPSF4LA6NMK7 HMGB1P9-201ENST00000429856 646 ntBASIC0.6□□□□□ -2.31
CPSF4LA6NMK7 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.6□□□□□ -2.31
CPSF4LA6NMK7 AC241584.1-201ENST00000438469 1241 ntBASIC0.6□□□□□ -2.31
CPSF4LA6NMK7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.6□□□□□ -2.31
CPSF4LA6NMK7 AC108059.3-201ENST00000456388 214 ntBASIC0.6□□□□□ -2.31
CPSF4LA6NMK7 RPS20P22-201ENST00000473700 357 ntBASIC0.6□□□□□ -2.31
CPSF4LA6NMK7 AC022447.1-201ENST00000515358 464 ntBASIC0.6□□□□□ -2.31
CPSF4LA6NMK7 RNU6-1053P-201ENST00000515930 101 ntBASIC0.6□□□□□ -2.31
CPSF4LA6NMK7 RNU6-237P-201ENST00000515985 71 ntBASIC0.6□□□□□ -2.31
CPSF4LA6NMK7 RNA5SP137-201ENST00000516833 135 ntBASIC0.6□□□□□ -2.31
CPSF4LA6NMK7 AC104997.1-201ENST00000519761 717 ntBASIC0.6□□□□□ -2.31
CPSF4LA6NMK7 AC107953.1-201ENST00000522216 297 ntBASIC0.6□□□□□ -2.31
CPSF4LA6NMK7 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.6□□□□□ -2.31
CPSF4LA6NMK7 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.6□□□□□ -2.31
CPSF4LA6NMK7 AC233702.2-202ENST00000562547 291 ntBASIC0.6□□□□□ -2.31
CPSF4LA6NMK7 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.6□□□□□ -2.31
CPSF4LA6NMK7 AC074051.3-201ENST00000570238 358 ntBASIC0.6□□□□□ -2.31
CPSF4LA6NMK7 AC022202.1-201ENST00000613515 211 ntBASIC0.6□□□□□ -2.31
CPSF4LA6NMK7 AC104763.3-201ENST00000613765 618 ntBASIC0.6□□□□□ -2.31
CPSF4LA6NMK7 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC0.6□□□□□ -2.31
CPSF4LA6NMK7 MTND2P41-201ENST00000637599 773 ntBASIC0.6□□□□□ -2.31
CPSF4LA6NMK7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.6□□□□□ -2.31
CPSF4LA6NMK7 AC005539.1-201ENST00000443768 1479 ntBASIC0.6□□□□□ -2.31
CPSF4LA6NMK7 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC0.59□□□□□ -2.31
CPSF4LA6NMK7 RNU6-1155P-201ENST00000363554 107 ntBASIC0.59□□□□□ -2.31
CPSF4LA6NMK7 RNU6-1032P-201ENST00000384100 107 ntBASIC0.59□□□□□ -2.31
CPSF4LA6NMK7 RNU6-452P-201ENST00000384406 107 ntBASIC0.59□□□□□ -2.31
CPSF4LA6NMK7 MIR30A-201ENST00000385092 71 ntBASIC0.59□□□□□ -2.31
CPSF4LA6NMK7 MIR618-201ENST00000385287 98 ntBASIC0.59□□□□□ -2.31
CPSF4LA6NMK7 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.59□□□□□ -2.31
CPSF4LA6NMK7 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC0.59□□□□□ -2.31
CPSF4LA6NMK7 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.59□□□□□ -2.31
CPSF4LA6NMK7 AC132942.1-201ENST00000486753 483 ntBASIC0.59□□□□□ -2.31
CPSF4LA6NMK7 HMGB1P35-201ENST00000503360 598 ntBASIC0.59□□□□□ -2.31
CPSF4LA6NMK7 SNORA44.1-201ENST00000517031 108 ntBASIC0.59□□□□□ -2.31
CPSF4LA6NMK7 SCARNA3-201ENST00000517097 143 ntBASIC0.59□□□□□ -2.31
CPSF4LA6NMK7 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.59□□□□□ -2.31
CPSF4LA6NMK7 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.59□□□□□ -2.31
CPSF4LA6NMK7 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.59□□□□□ -2.31
CPSF4LA6NMK7 AC013468.1-201ENST00000608680 598 ntBASIC0.59□□□□□ -2.31
CPSF4LA6NMK7 AC005021.1-201ENST00000608730 355 ntBASIC0.59□□□□□ -2.31
CPSF4LA6NMK7 DUXAP10-204ENST00000612052 616 ntBASIC0.59□□□□□ -2.31
CPSF4LA6NMK7 FRG1HP-204ENST00000617940 757 ntBASIC0.59□□□□□ -2.31
CPSF4LA6NMK7 AP003072.5-201ENST00000623872 773 ntBASIC0.59□□□□□ -2.31
CPSF4LA6NMK7 MIR7157-201ENST00000635801 60 ntBASIC0.59□□□□□ -2.31
CPSF4LA6NMK7 AC008568.2-201ENST00000623862 2313 ntBASIC0.59□□□□□ -2.32
CPSF4LA6NMK7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.59□□□□□ -2.32
CPSF4LA6NMK7 RNY1P10-201ENST00000363268 113 ntBASIC0.58□□□□□ -2.32
CPSF4LA6NMK7 MIR508-201ENST00000384857 115 ntBASIC0.58□□□□□ -2.32
CPSF4LA6NMK7 RNU6-272P-201ENST00000411028 104 ntBASIC0.58□□□□□ -2.32
CPSF4LA6NMK7 RPL27AP8-201ENST00000424277 446 ntBASIC0.58□□□□□ -2.32
CPSF4LA6NMK7 AC245047.4-201ENST00000433189 144 ntBASIC0.58□□□□□ -2.32
CPSF4LA6NMK7 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC0.58□□□□□ -2.32
CPSF4LA6NMK7 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.58□□□□□ -2.32
CPSF4LA6NMK7 RPS20P20-201ENST00000460498 340 ntBASIC0.58□□□□□ -2.32
CPSF4LA6NMK7 AC080013.2-201ENST00000460866 323 ntBASIC0.58□□□□□ -2.32
CPSF4LA6NMK7 NAA50-206ENST00000493454 964 ntTSL 2 BASIC0.58□□□□□ -2.32
CPSF4LA6NMK7 AC147055.4-201ENST00000504399 745 ntBASIC0.58□□□□□ -2.32
CPSF4LA6NMK7 DUXAP5-201ENST00000529668 529 ntBASIC0.58□□□□□ -2.32
CPSF4LA6NMK7 RPL21P5-201ENST00000554662 472 ntBASIC0.58□□□□□ -2.32
CPSF4LA6NMK7 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.58□□□□□ -2.32
CPSF4LA6NMK7 AC233266.2-201ENST00000567067 528 ntBASIC0.58□□□□□ -2.32
CPSF4LA6NMK7 AC109446.2-201ENST00000567872 497 ntBASIC0.58□□□□□ -2.32
CPSF4LA6NMK7 AL590095.2-201ENST00000604136 117 ntBASIC0.58□□□□□ -2.32
CPSF4LA6NMK7 AP002826.1-201ENST00000608835 315 ntBASIC0.58□□□□□ -2.32
CPSF4LA6NMK7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
CPSF4LA6NMK7 OR5H6-203ENST00000642105 978 ntBASIC0.58□□□□□ -2.32
CPSF4LA6NMK7 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC0.58□□□□□ -2.32
CPSF4LA6NMK7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
CPSF4LA6NMK7 MTND5P9-201ENST00000503854 1755 ntBASIC0.57□□□□□ -2.32
CPSF4LA6NMK7 RNU6-173P-201ENST00000364215 104 ntBASIC0.57□□□□□ -2.32
CPSF4LA6NMK7 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
CPSF4LA6NMK7 RNU6-1226P-201ENST00000384317 107 ntBASIC0.57□□□□□ -2.32
CPSF4LA6NMK7 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC0.57□□□□□ -2.32
CPSF4LA6NMK7 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.57□□□□□ -2.32
CPSF4LA6NMK7 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.57□□□□□ -2.32
CPSF4LA6NMK7 RPS4XP11-201ENST00000446897 772 ntBASIC0.57□□□□□ -2.32
CPSF4LA6NMK7 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC0.57□□□□□ -2.32
CPSF4LA6NMK7 BUD31P2-201ENST00000449374 300 ntBASIC0.57□□□□□ -2.32
CPSF4LA6NMK7 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.57□□□□□ -2.32
CPSF4LA6NMK7 HMGB1P36-201ENST00000487709 576 ntBASIC0.57□□□□□ -2.32
CPSF4LA6NMK7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.57□□□□□ -2.32
CPSF4LA6NMK7 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.57□□□□□ -2.32
CPSF4LA6NMK7 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.57□□□□□ -2.32
CPSF4LA6NMK7 AF213884.2-201ENST00000510417 903 ntBASIC0.57□□□□□ -2.32
CPSF4LA6NMK7 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.57□□□□□ -2.32
CPSF4LA6NMK7 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.57□□□□□ -2.32
CPSF4LA6NMK7 AC004812.1-201ENST00000540773 146 ntBASIC0.57□□□□□ -2.32
CPSF4LA6NMK7 AC044913.1-201ENST00000557200 430 ntBASIC0.57□□□□□ -2.32
CPSF4LA6NMK7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.57□□□□□ -2.32
CPSF4LA6NMK7 AL031274.2-201ENST00000599419 203 ntBASIC0.57□□□□□ -2.32
CPSF4LA6NMK7 AC090116.1-201ENST00000615679 446 ntBASIC0.57□□□□□ -2.32
CPSF4LA6NMK7 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC0.57□□□□□ -2.32
CPSF4LA6NMK7 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.56□□□□□ -2.32
CPSF4LA6NMK7 RNU1-93P-201ENST00000364704 169 ntBASIC0.56□□□□□ -2.32
CPSF4LA6NMK7 RNU6-1083P-201ENST00000384022 107 ntBASIC0.56□□□□□ -2.32
CPSF4LA6NMK7 RNU6-516P-201ENST00000411381 104 ntBASIC0.56□□□□□ -2.32
CPSF4LA6NMK7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms