Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 MIR6766-201ENST00000622641 72 ntBASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 AF246928.1-201ENST00000623768 87 ntBASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 AC093591.3-201ENST00000634516 308 ntBASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 MTND1P37-201ENST00000636562 264 ntBASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 RNU6-223P-201ENST00000362830 107 ntBASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 RNU1-51P-201ENST00000365345 176 ntBASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 MIR1261-201ENST00000408659 82 ntBASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 AC099548.1-201ENST00000421443 426 ntBASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 DPH3P2-201ENST00000422618 250 ntBASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 AL353777.1-201ENST00000425552 326 ntBASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 DDX3P2-201ENST00000446138 111 ntBASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 KATNBL1P6-201ENST00000453433 915 ntBASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 snoU13.28-201ENST00000459235 104 ntBASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 AC109486.1-201ENST00000486833 374 ntBASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 RPS29P21-201ENST00000496272 170 ntBASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 CDC42P4-201ENST00000510507 563 ntBASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 RAC1P5-201ENST00000512182 576 ntBASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 AF131216.2-201ENST00000512316 564 ntBASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 RNU6-390P-201ENST00000516259 103 ntBASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 HMGB1P14-201ENST00000557424 591 ntBASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 ROCK1P1-201ENST00000573767 549 ntBASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 AC002545.1-201ENST00000592511 181 ntBASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 AL645944.1-201ENST00000603857 493 ntBASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 AC019159.1-201ENST00000605094 187 ntBASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 AC068057.2-201ENST00000624047 895 ntBASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 AC079416.3-201ENST00000624479 549 ntBASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SMIM28A0A1B0GU29 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 ZNF519P1-201ENST00000449011 1626 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 RNY4P16-201ENST00000364768 94 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 DEFA7P-201ENST00000382676 285 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 OR5H15-201ENST00000383696 930 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 RNU6-533P-201ENST00000384144 107 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 RNU6-198P-201ENST00000384258 104 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 RNU6-1035P-201ENST00000384477 107 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 MIR221-201ENST00000385135 110 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 AL365203.2-201ENST00000423444 196 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 AC092047.1-201ENST00000424997 240 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 MTND1P26-201ENST00000440488 538 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 RNU6-420P-201ENST00000458780 107 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 RPL23AP41-201ENST00000484754 458 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 MTND1P22-201ENST00000510572 951 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 RNU6-201P-201ENST00000517100 61 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 AC025881.1-201ENST00000518851 512 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 MTND4LP18-201ENST00000526864 291 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 MTND3P12-201ENST00000559068 328 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 AC009163.5-201ENST00000575421 637 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 MIR4648-201ENST00000580107 72 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 MIR3146-201ENST00000580367 79 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 MIR548AB-201ENST00000584917 84 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 AP000860.1-201ENST00000605250 559 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 AC131902.3-201ENST00000611767 581 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 AL161629.2-201ENST00000615347 275 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 SNHG22-203ENST00000617833 660 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 AC092140.2-201ENST00000618027 521 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 AC091953.2-201ENST00000623979 160 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 AC068880.5-201ENST00000624331 290 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 AC007494.3-201ENST00000624660 743 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 AC019226.2-201ENST00000625973 424 ntBASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
SMIM28A0A1B0GU29 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SMIM28A0A1B0GU29 RNY4P24-201ENST00000362735 96 ntBASIC2.42□□□□□ -2.02
SMIM28A0A1B0GU29 SNORD56.5-201ENST00000364281 72 ntBASIC2.42□□□□□ -2.02
SMIM28A0A1B0GU29 RNU6-217P-201ENST00000384164 104 ntBASIC2.42□□□□□ -2.02
SMIM28A0A1B0GU29 AL031577.2-201ENST00000404133 280 ntBASIC2.42□□□□□ -2.02
SMIM28A0A1B0GU29 NPM1P11-201ENST00000417106 855 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms