Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AL391813.1-201ENST00000603098 260 ntBASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 AC010678.1-201ENST00000614118 713 ntBASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 SDR42E1P4-201ENST00000620894 481 ntBASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 AC025048.6-202ENST00000627667 438 ntBASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 AL079343.1-201ENST00000572358 1771 ntBASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 RNU6-754P-201ENST00000391166 107 ntBASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 MTCO1P56-201ENST00000401674 224 ntBASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 AL356421.1-201ENST00000403255 413 ntBASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 CCNG1P1-201ENST00000406783 885 ntBASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 RNA5SP270-201ENST00000411361 118 ntBASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 UBE2FP1-201ENST00000416536 447 ntBASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 SKA2P1-201ENST00000425592 390 ntBASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 AC124916.1-201ENST00000444020 547 ntBASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 FTH1P25-201ENST00000447665 469 ntBASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 TRBV1-201ENST00000476502 284 ntBASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 AC092902.1-201ENST00000486999 259 ntBASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 AC068781.1-201ENST00000488231 618 ntBASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 NACAP3-201ENST00000552100 481 ntBASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 MIR1273D-201ENST00000577266 86 ntBASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 MIR4648-201ENST00000580107 72 ntBASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 AL353997.4-201ENST00000586196 166 ntBASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 AC069294.1-201ENST00000608397 350 ntBASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 AC023158.2-201ENST00000614876 543 ntBASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 AL158801.5-201ENST00000623123 465 ntBASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 OR1S1-201ENST00000624470 978 ntBASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 AL356094.1-201ENST00000624663 1212 ntBASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.88□□□□□ -2.11
USH1CQ9Y6N9 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 Y_RNA.245-201ENST00000364493 95 ntBASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 snoZ40.1-201ENST00000364540 72 ntBASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 RNU6-432P-201ENST00000384196 109 ntBASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 MIR676-201ENST00000390702 67 ntBASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 AL590084.2-201ENST00000401481 382 ntBASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 RN7SKP223-201ENST00000410582 62 ntBASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 EIF1AXP1-201ENST00000419267 435 ntBASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 RPL30P4-201ENST00000429309 333 ntBASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 COX7BP2-201ENST00000437976 242 ntBASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 AC010095.1-201ENST00000443543 144 ntBASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 FAM103A2P-201ENST00000444122 354 ntBASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 snoU13.26-201ENST00000459452 105 ntBASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 RPS29P21-201ENST00000496272 170 ntBASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 HMGB3P17-201ENST00000504195 649 ntBASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 MIR892C-201ENST00000516410 77 ntBASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 AC025165.5-201ENST00000602802 578 ntBASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 AC099063.3-201ENST00000642066 185 ntBASIC1.87□□□□□ -2.11
USH1CQ9Y6N9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 SNORA16.1-201ENST00000364597 132 ntBASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 RNU6-234P-201ENST00000365229 104 ntBASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 RNU2-20P-201ENST00000410425 191 ntBASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 RN7SKP158-201ENST00000410453 326 ntBASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 MTND1P21-201ENST00000412991 285 ntBASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 AC010153.1-201ENST00000432862 727 ntBASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 AC004383.1-201ENST00000438135 289 ntBASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 MTND5P14-201ENST00000441481 1267 ntBASIC1.86□□□□□ -2.11
USH1CQ9Y6N9 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms