Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 AC007685.1-201ENST00000329806 452 ntBASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 FRG1CP-201ENST00000358464 769 ntBASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 RNU4-79P-201ENST00000362764 141 ntBASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 SNORD113-7-201ENST00000363762 77 ntBASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 Y_RNA.419-201ENST00000384041 102 ntBASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 EIF4E2P1-201ENST00000393781 255 ntBASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 AL139039.1-201ENST00000401900 692 ntBASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 AL139397.2-201ENST00000404529 772 ntBASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 FAT1P1-201ENST00000406588 507 ntBASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 BTF3L4P3-201ENST00000418879 476 ntBASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 AL356535.1-201ENST00000440335 398 ntBASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 HMGB3P22-202ENST00000451823 572 ntBASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 RPL31P60-201ENST00000478450 367 ntBASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 TRBVA-201ENST00000498804 316 ntBASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 AC110768.1-201ENST00000509222 400 ntBASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 HIGD1AP13-201ENST00000509878 289 ntBASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 AC026403.1-201ENST00000518938 295 ntBASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 AC087369.1-201ENST00000520775 996 ntBASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 MTCO3P23-201ENST00000561363 289 ntBASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 MIR4742-201ENST00000581069 85 ntBASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 AC005498.1-201ENST00000592125 465 ntBASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 AC025946.2-201ENST00000603398 234 ntBASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 AC092747.3-201ENST00000603769 301 ntBASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 AC106900.2-201ENST00000604994 317 ntBASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 AC090132.2-201ENST00000615881 347 ntBASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 AC126177.8-201ENST00000618339 1015 ntBASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 AC018555.1-201ENST00000567548 1980 ntBASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.89□□□□□ -1.79
PCDHB1Q9Y5F3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 RNU6-715P-201ENST00000365204 103 ntBASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 RNU6-741P-201ENST00000383889 107 ntBASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 SNORA9-201ENST00000384215 133 ntBASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 RNU6-831P-201ENST00000384548 107 ntBASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 Y_RNA.534-201ENST00000384599 112 ntBASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 U8.11-201ENST00000384699 133 ntBASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 U8.12-201ENST00000384701 133 ntBASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 RPS20P15-201ENST00000412792 311 ntBASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 BX323014.1-201ENST00000412876 237 ntBASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 RAC1P3-201ENST00000416129 580 ntBASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 HSPE1P1-201ENST00000421494 318 ntBASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 AC091390.3-201ENST00000426478 338 ntBASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 NDUFA5P4-201ENST00000436704 385 ntBASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 RANP8-201ENST00000444720 713 ntBASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 AC009237.8-201ENST00000445492 379 ntBASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 MRPL50P4-201ENST00000446432 475 ntBASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 U8.18-201ENST00000459285 133 ntBASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 AC083904.1-201ENST00000487828 231 ntBASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 RN7SL323P-201ENST00000494712 295 ntBASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 AP001804.3-201ENST00000525146 880 ntBASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 AC004024.1-201ENST00000549244 247 ntBASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 AC098826.3-201ENST00000603823 466 ntBASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 AC064836.2-201ENST00000609491 462 ntBASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 AC019176.2-201ENST00000611579 315 ntBASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 AL391261.4-201ENST00000616012 481 ntBASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 AL034408.1-202ENST00000636088 415 ntBASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.88□□□□□ -1.79
PCDHB1Q9Y5F3 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 HSPA8P4-201ENST00000511877 1920 ntBASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 Y_RNA.414-201ENST00000384011 101 ntBASIC3.87□□□□□ -1.79
PCDHB1Q9Y5F3 MIR483-201ENST00000385070 76 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 174.4 ms