Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 BX119904.4-201ENST00000424402 301 ntBASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 MTCO2P1-201ENST00000424648 477 ntBASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 GTF2IP7-202ENST00000436677 309 ntBASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 RPL23AP41-201ENST00000484754 458 ntBASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 MTCYBP16-201ENST00000509187 1129 ntBASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 AC006499.2-201ENST00000513470 337 ntBASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 SNORD19.2-201ENST00000516978 73 ntBASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 RNU2-19P-201ENST00000517288 84 ntBASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 HMGN1P28-201ENST00000521340 364 ntBASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 AC110588.1-201ENST00000559699 137 ntBASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 AL049838.1-201ENST00000563647 981 ntBASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 AL353997.4-201ENST00000586196 166 ntBASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 AL139344.1-201ENST00000605228 195 ntBASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 U4atac.1-201ENST00000618345 95 ntBASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 AC009268.2-201ENST00000621925 457 ntBASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 AC091932.3-201ENST00000624223 323 ntBASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 SNORA16.1-201ENST00000364597 132 ntBASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 RNU6-952P-201ENST00000391164 108 ntBASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 RNA5SP489-201ENST00000410986 109 ntBASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 RNA5SP270-201ENST00000411361 118 ntBASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 BX276092.3-201ENST00000424182 230 ntBASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 AC004383.1-201ENST00000438135 289 ntBASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 MTND4P6-201ENST00000438297 472 ntBASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 RNU7-136P-201ENST00000458819 69 ntBASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 AC008526.1-201ENST00000509149 338 ntBASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 RNU6-583P-201ENST00000516012 92 ntBASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 OR8K2P-201ENST00000524645 927 ntBASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 AC118273.2-201ENST00000532092 465 ntBASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 CBX3P7-201ENST00000532876 502 ntBASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 AP000873.5-201ENST00000533906 236 ntBASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 CYB5AP5-201ENST00000549779 389 ntBASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 NRBF2P1-201ENST00000587407 859 ntBASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 AC005261.5-201ENST00000596280 355 ntBASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 AC068790.3-201ENST00000602988 553 ntBASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 AL109918.3-201ENST00000603072 338 ntBASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 AC004805.2-201ENST00000605382 482 ntBASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 AC009318.2-201ENST00000610917 651 ntBASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 AL627230.6-201ENST00000611129 280 ntBASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 AC104763.3-201ENST00000613765 618 ntBASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 AC019226.1-201ENST00000625666 515 ntBASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 MIR3199-2-201ENST00000636243 86 ntBASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 AC131280.1-202ENST00000624067 4211 ntBASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HDGFL3Q9Y3E1 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HDGFL3Q9Y3E1 AL590084.2-201ENST00000401481 382 ntBASIC1.64□□□□□ -2.15
HDGFL3Q9Y3E1 TXNP7-201ENST00000406296 293 ntBASIC1.64□□□□□ -2.15
HDGFL3Q9Y3E1 RN7SKP158-201ENST00000410453 326 ntBASIC1.64□□□□□ -2.15
HDGFL3Q9Y3E1 MTND1P21-201ENST00000412991 285 ntBASIC1.64□□□□□ -2.15
HDGFL3Q9Y3E1 RPL26P27-201ENST00000414397 437 ntBASIC1.64□□□□□ -2.15
HDGFL3Q9Y3E1 BTF3P8-201ENST00000414577 526 ntBASIC1.64□□□□□ -2.15
HDGFL3Q9Y3E1 MTCYBP38-201ENST00000417160 1123 ntBASIC1.64□□□□□ -2.15
HDGFL3Q9Y3E1 ELOCP14-201ENST00000428070 331 ntBASIC1.64□□□□□ -2.15
HDGFL3Q9Y3E1 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.64□□□□□ -2.15
HDGFL3Q9Y3E1 AL451074.3-201ENST00000437709 472 ntBASIC1.64□□□□□ -2.15
HDGFL3Q9Y3E1 ELOCP7-201ENST00000439968 331 ntBASIC1.64□□□□□ -2.15
HDGFL3Q9Y3E1 snoU13.15-201ENST00000459407 104 ntBASIC1.64□□□□□ -2.15
HDGFL3Q9Y3E1 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.64□□□□□ -2.15
HDGFL3Q9Y3E1 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.64□□□□□ -2.15
HDGFL3Q9Y3E1 HMGB1P36-201ENST00000487709 576 ntBASIC1.64□□□□□ -2.15
HDGFL3Q9Y3E1 AF213884.2-201ENST00000510417 903 ntBASIC1.64□□□□□ -2.15
HDGFL3Q9Y3E1 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.64□□□□□ -2.15
HDGFL3Q9Y3E1 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.64□□□□□ -2.15
HDGFL3Q9Y3E1 AC104417.1-201ENST00000523974 751 ntBASIC1.64□□□□□ -2.15
HDGFL3Q9Y3E1 MIR3122-201ENST00000577243 73 ntBASIC1.64□□□□□ -2.15
HDGFL3Q9Y3E1 MIR5708-201ENST00000579723 85 ntBASIC1.64□□□□□ -2.15
HDGFL3Q9Y3E1 AC078899.2-201ENST00000595282 212 ntBASIC1.64□□□□□ -2.15
HDGFL3Q9Y3E1 AL121652.1-201ENST00000608851 448 ntBASIC1.64□□□□□ -2.15
HDGFL3Q9Y3E1 uc_338.14-201ENST00000613162 166 ntBASIC1.64□□□□□ -2.15
HDGFL3Q9Y3E1 AC107075.1-201ENST00000613695 314 ntBASIC1.64□□□□□ -2.15
HDGFL3Q9Y3E1 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.64□□□□□ -2.15
HDGFL3Q9Y3E1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HDGFL3Q9Y3E1 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.64□□□□□ -2.15
HDGFL3Q9Y3E1 AC011477.1-204ENST00000623416 1325 ntBASIC1.64□□□□□ -2.15
HDGFL3Q9Y3E1 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.63□□□□□ -2.15
HDGFL3Q9Y3E1 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms