Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 AC108479.2-201ENST00000617314 601 ntBASIC2.86□□□□□ -1.95
SATB2Q9UPW6 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
SATB2Q9UPW6 AC007785.2-201ENST00000598627 1916 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
SATB2Q9UPW6 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
SATB2Q9UPW6 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SATB2Q9UPW6 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
SATB2Q9UPW6 AC073325.2-201ENST00000339545 159 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SATB2Q9UPW6 RNA5SP252-201ENST00000391131 119 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 AL445529.1-201ENST00000398713 389 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 MRPL42P2-201ENST00000403169 426 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 RPS3AP3-201ENST00000411933 242 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.85□□□□□ -1.95
SATB2Q9UPW6 AL645937.1-202ENST00000421799 937 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 AC006366.1-201ENST00000422002 759 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 NUP35P1-201ENST00000422734 947 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 OOSP1P1-201ENST00000423265 274 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.85□□□□□ -1.95
SATB2Q9UPW6 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.85□□□□□ -1.95
SATB2Q9UPW6 AL022238.1-201ENST00000442557 355 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 MTND6P13-201ENST00000443510 523 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.85□□□□□ -1.95
SATB2Q9UPW6 AP000936.2-201ENST00000447151 681 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 ST13P20-201ENST00000447996 1065 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 AC108938.1-201ENST00000451204 136 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 RPS20P22-201ENST00000473700 357 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 AL135752.1-201ENST00000479477 471 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 LARP1BP2-201ENST00000486594 519 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 MTND5P13-201ENST00000513046 1079 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 RN7SKP43-201ENST00000516173 320 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 Y_RNA.672-201ENST00000516289 104 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.85□□□□□ -1.95
SATB2Q9UPW6 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.85□□□□□ -1.95
SATB2Q9UPW6 AP005136.1-201ENST00000579765 429 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 MIR3670-2-201ENST00000582974 65 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 MIR3670-1-201ENST00000584160 65 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 MIR3670-3-201ENST00000584855 65 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 AC005771.1-201ENST00000585581 349 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 AC104984.5-201ENST00000586878 94 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 AC002545.1-201ENST00000592511 181 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.85□□□□□ -1.95
SATB2Q9UPW6 AC079089.3-201ENST00000603094 673 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 NUTF2P8-201ENST00000604593 363 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 AC135507.1-201ENST00000607214 561 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 AC103710.2-201ENST00000609912 942 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 AC091304.9-201ENST00000612091 226 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 MIR3670-4-201ENST00000612260 65 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 AC008250.2-201ENST00000615261 205 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 MIR6715A-201ENST00000615929 79 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
SATB2Q9UPW6 AC002064.3-201ENST00000623448 346 ntBASIC2.85□□□□□ -1.95
SATB2Q9UPW6 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
SATB2Q9UPW6 AP003122.5-201ENST00000527668 3766 ntBASIC2.84□□□□□ -1.95
SATB2Q9UPW6 TPTE2P4-201ENST00000258589 1605 ntBASIC2.84□□□□□ -1.95
SATB2Q9UPW6 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SATB2Q9UPW6 RNU4-82P-201ENST00000362443 140 ntBASIC2.84□□□□□ -1.95
SATB2Q9UPW6 SNORA18.3-201ENST00000384122 132 ntBASIC2.84□□□□□ -1.95
SATB2Q9UPW6 FCF1P1-201ENST00000432690 571 ntBASIC2.84□□□□□ -1.95
SATB2Q9UPW6 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.84□□□□□ -1.95
SATB2Q9UPW6 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.84□□□□□ -1.95
SATB2Q9UPW6 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.84□□□□□ -1.95
SATB2Q9UPW6 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SATB2Q9UPW6 AL033528.1-201ENST00000453780 140 ntBASIC2.84□□□□□ -1.95
SATB2Q9UPW6 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.84□□□□□ -1.95
SATB2Q9UPW6 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.84□□□□□ -1.95
SATB2Q9UPW6 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.84□□□□□ -1.95
SATB2Q9UPW6 SNORD42A-201ENST00000459584 64 ntBASIC2.84□□□□□ -1.95
SATB2Q9UPW6 RN7SL20P-201ENST00000488827 297 ntBASIC2.84□□□□□ -1.95
SATB2Q9UPW6 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.84□□□□□ -1.95
SATB2Q9UPW6 AC010587.1-201ENST00000505809 469 ntBASIC2.84□□□□□ -1.95
SATB2Q9UPW6 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.84□□□□□ -1.95
SATB2Q9UPW6 RNA5SP337-201ENST00000517007 109 ntBASIC2.84□□□□□ -1.95
SATB2Q9UPW6 RNU2-46P-201ENST00000517038 113 ntBASIC2.84□□□□□ -1.95
SATB2Q9UPW6 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SATB2Q9UPW6 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SATB2Q9UPW6 ARL2BPP2-201ENST00000550907 489 ntBASIC2.84□□□□□ -1.95
SATB2Q9UPW6 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.84□□□□□ -1.95
SATB2Q9UPW6 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.84□□□□□ -1.95
SATB2Q9UPW6 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.84□□□□□ -1.95
SATB2Q9UPW6 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.84□□□□□ -1.95
SATB2Q9UPW6 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.84□□□□□ -1.95
SATB2Q9UPW6 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.84□□□□□ -1.95
SATB2Q9UPW6 MIR4435-1-201ENST00000582552 80 ntBASIC2.84□□□□□ -1.95
SATB2Q9UPW6 AC073544.2-201ENST00000601155 540 ntBASIC2.84□□□□□ -1.95
SATB2Q9UPW6 DPPA3P3-201ENST00000603842 430 ntBASIC2.84□□□□□ -1.95
SATB2Q9UPW6 AC136601.2-201ENST00000604356 474 ntBASIC2.84□□□□□ -1.95
SATB2Q9UPW6 AC007619.2-201ENST00000605743 379 ntBASIC2.84□□□□□ -1.95
SATB2Q9UPW6 AC010297.1-201ENST00000623948 149 ntBASIC2.84□□□□□ -1.95
SATB2Q9UPW6 OR5H6-203ENST00000642105 978 ntBASIC2.84□□□□□ -1.95
SATB2Q9UPW6 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.84□□□□□ -1.96
SATB2Q9UPW6 AC138915.1-201ENST00000565427 1685 ntBASIC2.83□□□□□ -1.96
SATB2Q9UPW6 RNU6-511P-201ENST00000363496 107 ntBASIC2.83□□□□□ -1.96
SATB2Q9UPW6 RNA5SP139-201ENST00000364340 117 ntBASIC2.83□□□□□ -1.96
SATB2Q9UPW6 RNU6-741P-201ENST00000383889 107 ntBASIC2.83□□□□□ -1.96
SATB2Q9UPW6 RNU6-851P-201ENST00000384565 107 ntBASIC2.83□□□□□ -1.96
SATB2Q9UPW6 RNU6-297P-201ENST00000384636 107 ntBASIC2.83□□□□□ -1.96
SATB2Q9UPW6 RPS4XP8-201ENST00000402039 771 ntBASIC2.83□□□□□ -1.96
SATB2Q9UPW6 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SATB2Q9UPW6 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms