Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 MIR192-201ENST00000384915 110 ntBASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 MIR568-201ENST00000385036 95 ntBASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 MIR548F4-201ENST00000408515 105 ntBASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 HMGB1P9-201ENST00000429856 646 ntBASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 AL592045.1-201ENST00000429867 352 ntBASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 AC097713.2-201ENST00000430199 356 ntBASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 NOTCH2P1-201ENST00000443481 624 ntBASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 AL162591.2-201ENST00000449634 317 ntBASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 ANP32BP2-201ENST00000454525 545 ntBASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 DHFRP3-201ENST00000455595 559 ntBASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 snoU13.24-201ENST00000458998 104 ntBASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 AC087588.1-201ENST00000462203 316 ntBASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 RPS29P22-201ENST00000472363 168 ntBASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 RPS4XP13-201ENST00000483219 789 ntBASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 AL049874.1-201ENST00000489560 388 ntBASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 SNORA70.14-201ENST00000516205 110 ntBASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 RNA5SP384-201ENST00000516615 116 ntBASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 RN7SKP92-201ENST00000517266 244 ntBASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 AC087369.1-201ENST00000520775 996 ntBASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 AC022968.1-201ENST00000567372 442 ntBASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 MIR4503-201ENST00000582187 83 ntBASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 AC008745.1-201ENST00000604064 271 ntBASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 AL512643.1-201ENST00000635735 524 ntBASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 Z99571.1-201ENST00000636677 394 ntBASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
BRPF3Q9ULD4 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC5.19□□□□□ -1.58
BRPF3Q9ULD4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
BRPF3Q9ULD4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
BRPF3Q9ULD4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
BRPF3Q9ULD4 AP001148.1-201ENST00000624124 2359 ntBASIC5.19□□□□□ -1.58
BRPF3Q9ULD4 RNU6-1059P-201ENST00000363752 98 ntBASIC5.19□□□□□ -1.58
BRPF3Q9ULD4 Y_RNA.496-201ENST00000384444 101 ntBASIC5.19□□□□□ -1.58
BRPF3Q9ULD4 Y_RNA.527-201ENST00000384573 102 ntBASIC5.19□□□□□ -1.58
BRPF3Q9ULD4 AC008267.5-201ENST00000424928 265 ntBASIC5.19□□□□□ -1.58
BRPF3Q9ULD4 RSL24D1P6-201ENST00000426934 401 ntBASIC5.19□□□□□ -1.58
BRPF3Q9ULD4 MTCYBP9-201ENST00000431021 303 ntBASIC5.19□□□□□ -1.58
BRPF3Q9ULD4 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.19□□□□□ -1.58
BRPF3Q9ULD4 HSPD1P21-201ENST00000436541 245 ntBASIC5.19□□□□□ -1.58
BRPF3Q9ULD4 GSTA11P-201ENST00000452866 669 ntBASIC5.19□□□□□ -1.58
BRPF3Q9ULD4 RNU7-187P-201ENST00000458985 68 ntBASIC5.19□□□□□ -1.58
BRPF3Q9ULD4 MTATP8P1-201ENST00000467115 207 ntBASIC5.19□□□□□ -1.58
BRPF3Q9ULD4 SUMO2P6-201ENST00000505273 288 ntBASIC5.19□□□□□ -1.58
BRPF3Q9ULD4 HMGB1P22-201ENST00000505315 124 ntBASIC5.19□□□□□ -1.58
BRPF3Q9ULD4 AC022493.2-201ENST00000506122 481 ntBASIC5.19□□□□□ -1.58
BRPF3Q9ULD4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.19□□□□□ -1.58
BRPF3Q9ULD4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC5.19□□□□□ -1.58
BRPF3Q9ULD4 LRRC37A5P-203ENST00000580181 585 ntBASIC5.19□□□□□ -1.58
BRPF3Q9ULD4 MIR4715-201ENST00000584117 79 ntBASIC5.19□□□□□ -1.58
BRPF3Q9ULD4 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.19□□□□□ -1.58
BRPF3Q9ULD4 AC234771.5-201ENST00000600161 514 ntBASIC5.19□□□□□ -1.58
BRPF3Q9ULD4 AC006006.1-201ENST00000603082 144 ntBASIC5.19□□□□□ -1.58
BRPF3Q9ULD4 AL162373.1-201ENST00000620433 407 ntBASIC5.19□□□□□ -1.58
BRPF3Q9ULD4 AL360181.4-201ENST00000621752 134 ntBASIC5.19□□□□□ -1.58
BRPF3Q9ULD4 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.19□□□□□ -1.58
BRPF3Q9ULD4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 RNA5SP307-201ENST00000362863 116 ntBASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 RNU6-607P-201ENST00000411283 108 ntBASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 RPS20P14-201ENST00000412545 360 ntBASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 SNRPGP3-201ENST00000469405 227 ntBASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 RN7SL459P-201ENST00000481078 302 ntBASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 MTCO2P24-201ENST00000515611 426 ntBASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 RNU6-120P-201ENST00000516077 103 ntBASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 RNU6-307P-201ENST00000516743 106 ntBASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 RNA5SP471-201ENST00000516971 106 ntBASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 IGKV2D-19-201ENST00000523346 262 ntBASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 AC104576.1-201ENST00000524225 88 ntBASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 AC091516.1-201ENST00000549191 703 ntBASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 AC008269.2-201ENST00000561915 1105 ntBASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 RPL23AP97-201ENST00000568955 471 ntBASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 AC002545.1-201ENST00000592511 181 ntBASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 AC068790.4-201ENST00000602474 263 ntBASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 MIR432-201ENST00000606207 94 ntBASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 AC005344.1-201ENST00000613391 459 ntBASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 AC007546.2-201ENST00000623996 360 ntBASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
BRPF3Q9ULD4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC5.17□□□□□ -1.58
BRPF3Q9ULD4 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms