Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.13□□□□□ -1.75
USP25Q9UHP3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.13□□□□□ -1.75
USP25Q9UHP3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.13□□□□□ -1.75
USP25Q9UHP3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.13□□□□□ -1.75
USP25Q9UHP3 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.13□□□□□ -1.75
USP25Q9UHP3 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.13□□□□□ -1.75
USP25Q9UHP3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
USP25Q9UHP3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
USP25Q9UHP3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.13□□□□□ -1.75
USP25Q9UHP3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
USP25Q9UHP3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
USP25Q9UHP3 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.12□□□□□ -1.75
USP25Q9UHP3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
USP25Q9UHP3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
USP25Q9UHP3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
USP25Q9UHP3 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
USP25Q9UHP3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
USP25Q9UHP3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
USP25Q9UHP3 RNU6-332P-201ENST00000391193 108 ntBASIC4.12□□□□□ -1.75
USP25Q9UHP3 FAT1P1-201ENST00000406588 507 ntBASIC4.12□□□□□ -1.75
USP25Q9UHP3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.12□□□□□ -1.75
USP25Q9UHP3 RNA5SP31-201ENST00000411144 127 ntBASIC4.12□□□□□ -1.75
USP25Q9UHP3 BX679664.1-201ENST00000434429 253 ntBASIC4.12□□□□□ -1.75
USP25Q9UHP3 NDUFB4P6-201ENST00000436819 366 ntBASIC4.12□□□□□ -1.75
USP25Q9UHP3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.12□□□□□ -1.75
USP25Q9UHP3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.12□□□□□ -1.75
USP25Q9UHP3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.12□□□□□ -1.75
USP25Q9UHP3 VN1R105P-201ENST00000486595 910 ntBASIC4.12□□□□□ -1.75
USP25Q9UHP3 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.12□□□□□ -1.75
USP25Q9UHP3 RN7SKP219-201ENST00000516825 296 ntBASIC4.12□□□□□ -1.75
USP25Q9UHP3 AC105029.1-201ENST00000520250 669 ntBASIC4.12□□□□□ -1.75
USP25Q9UHP3 AC087241.2-201ENST00000535801 324 ntBASIC4.12□□□□□ -1.75
USP25Q9UHP3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.12□□□□□ -1.75
USP25Q9UHP3 BNIP3P6-201ENST00000549284 499 ntBASIC4.12□□□□□ -1.75
USP25Q9UHP3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.12□□□□□ -1.75
USP25Q9UHP3 AC106785.1-201ENST00000565935 262 ntBASIC4.12□□□□□ -1.75
USP25Q9UHP3 MIR4286-201ENST00000580651 93 ntBASIC4.12□□□□□ -1.75
USP25Q9UHP3 MIR4795-201ENST00000584182 89 ntBASIC4.12□□□□□ -1.75
USP25Q9UHP3 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.12□□□□□ -1.75
USP25Q9UHP3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.12□□□□□ -1.75
USP25Q9UHP3 AC009570.1-201ENST00000609599 745 ntBASIC4.12□□□□□ -1.75
USP25Q9UHP3 AP001486.3-201ENST00000615334 372 ntBASIC4.12□□□□□ -1.75
USP25Q9UHP3 AC009248.2-201ENST00000619826 254 ntBASIC4.12□□□□□ -1.75
USP25Q9UHP3 AL357559.1-201ENST00000622228 274 ntBASIC4.12□□□□□ -1.75
USP25Q9UHP3 AC092628.2-201ENST00000622492 339 ntBASIC4.12□□□□□ -1.75
USP25Q9UHP3 AC090617.10-201ENST00000624308 134 ntBASIC4.12□□□□□ -1.75
USP25Q9UHP3 AC007656.2-201ENST00000624902 4547 ntBASIC4.12□□□□□ -1.75
USP25Q9UHP3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
USP25Q9UHP3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
USP25Q9UHP3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
USP25Q9UHP3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
USP25Q9UHP3 RNU4-79P-201ENST00000362764 141 ntBASIC4.11□□□□□ -1.75
USP25Q9UHP3 Y_RNA.460-201ENST00000384255 102 ntBASIC4.11□□□□□ -1.75
USP25Q9UHP3 RNU6-510P-201ENST00000391239 108 ntBASIC4.11□□□□□ -1.75
USP25Q9UHP3 RPS15AP6-201ENST00000420703 385 ntBASIC4.11□□□□□ -1.75
USP25Q9UHP3 RPL35AP12-201ENST00000425362 338 ntBASIC4.11□□□□□ -1.75
USP25Q9UHP3 RPL36AP6-201ENST00000435770 321 ntBASIC4.11□□□□□ -1.75
USP25Q9UHP3 SSXP4-201ENST00000451349 245 ntBASIC4.11□□□□□ -1.75
USP25Q9UHP3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.11□□□□□ -1.75
USP25Q9UHP3 RPS4XP2-201ENST00000458402 793 ntBASIC4.11□□□□□ -1.75
USP25Q9UHP3 RNA5SP310-201ENST00000459084 116 ntBASIC4.11□□□□□ -1.75
USP25Q9UHP3 AL133162.1-201ENST00000463228 453 ntBASIC4.11□□□□□ -1.75
USP25Q9UHP3 AC006512.1-201ENST00000468816 291 ntBASIC4.11□□□□□ -1.75
USP25Q9UHP3 AC084357.1-201ENST00000473404 255 ntBASIC4.11□□□□□ -1.75
USP25Q9UHP3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.11□□□□□ -1.75
USP25Q9UHP3 RPL30P5-201ENST00000494923 336 ntBASIC4.11□□□□□ -1.75
USP25Q9UHP3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
USP25Q9UHP3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.11□□□□□ -1.75
USP25Q9UHP3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.11□□□□□ -1.75
USP25Q9UHP3 RNU4-29P-201ENST00000515943 174 ntBASIC4.11□□□□□ -1.75
USP25Q9UHP3 AC022690.1-201ENST00000526681 550 ntBASIC4.11□□□□□ -1.75
USP25Q9UHP3 AP005435.4-201ENST00000529514 284 ntBASIC4.11□□□□□ -1.75
USP25Q9UHP3 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.11□□□□□ -1.75
USP25Q9UHP3 AC004024.1-201ENST00000549244 247 ntBASIC4.11□□□□□ -1.75
USP25Q9UHP3 AC087499.8-201ENST00000578406 226 ntBASIC4.11□□□□□ -1.75
USP25Q9UHP3 AC002545.1-201ENST00000592511 181 ntBASIC4.11□□□□□ -1.75
USP25Q9UHP3 AC021646.1-201ENST00000605469 484 ntBASIC4.11□□□□□ -1.75
USP25Q9UHP3 uc_338.5-201ENST00000611839 155 ntBASIC4.11□□□□□ -1.75
USP25Q9UHP3 AC135507.2-201ENST00000612443 309 ntBASIC4.11□□□□□ -1.75
USP25Q9UHP3 AL442067.2-201ENST00000614033 363 ntBASIC4.11□□□□□ -1.75
USP25Q9UHP3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
USP25Q9UHP3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
USP25Q9UHP3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
USP25Q9UHP3 AC118273.1-201ENST00000525324 3006 ntBASIC4.11□□□□□ -1.75
USP25Q9UHP3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
USP25Q9UHP3 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
USP25Q9UHP3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
USP25Q9UHP3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
USP25Q9UHP3 Y_RNA.231-201ENST00000364358 102 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 MIR23B-201ENST00000384832 97 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 MIR30B-201ENST00000384850 88 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 RPL32P23-201ENST00000397237 405 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 RNU2-39P-201ENST00000410604 198 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 RNU6-1148P-201ENST00000410992 104 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 NCOR1P3-201ENST00000420479 303 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 AL645937.1-202ENST00000421799 937 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.1□□□□□ -1.75
USP25Q9UHP3 MTCYBP8-201ENST00000422855 651 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 RNU7-182P-201ENST00000459009 62 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 MRPS17P3-201ENST00000465453 385 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms