Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 SNRPFP3-201ENST00000457792 225 ntBASIC3.82□□□□□ -1.8
DKK3Q9UBP4 U8.18-201ENST00000459285 133 ntBASIC3.82□□□□□ -1.8
DKK3Q9UBP4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.82□□□□□ -1.8
DKK3Q9UBP4 AC084198.1-201ENST00000477747 402 ntBASIC3.82□□□□□ -1.8
DKK3Q9UBP4 RN7SL432P-201ENST00000484057 298 ntBASIC3.82□□□□□ -1.8
DKK3Q9UBP4 GMPSP1-201ENST00000514075 579 ntBASIC3.82□□□□□ -1.8
DKK3Q9UBP4 RNU4-49P-201ENST00000516080 140 ntBASIC3.82□□□□□ -1.8
DKK3Q9UBP4 Y_RNA.665-201ENST00000516177 98 ntBASIC3.82□□□□□ -1.8
DKK3Q9UBP4 TRMT10BP1-201ENST00000519377 943 ntBASIC3.82□□□□□ -1.8
DKK3Q9UBP4 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.82□□□□□ -1.8
DKK3Q9UBP4 OR5B10P-201ENST00000532869 642 ntBASIC3.82□□□□□ -1.8
DKK3Q9UBP4 AC018630.1-201ENST00000541376 925 ntBASIC3.82□□□□□ -1.8
DKK3Q9UBP4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
DKK3Q9UBP4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
DKK3Q9UBP4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.82□□□□□ -1.8
DKK3Q9UBP4 AL442663.2-201ENST00000554385 511 ntBASIC3.82□□□□□ -1.8
DKK3Q9UBP4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.82□□□□□ -1.8
DKK3Q9UBP4 MIR3200-201ENST00000580767 85 ntBASIC3.82□□□□□ -1.8
DKK3Q9UBP4 AL137849.1-201ENST00000604767 169 ntBASIC3.82□□□□□ -1.8
DKK3Q9UBP4 SNORA62.6-201ENST00000606322 83 ntBASIC3.82□□□□□ -1.8
DKK3Q9UBP4 AL022345.1-201ENST00000607292 135 ntBASIC3.82□□□□□ -1.8
DKK3Q9UBP4 AC243312.2-201ENST00000623340 601 ntBASIC3.82□□□□□ -1.8
DKK3Q9UBP4 MIR4275-201ENST00000636486 87 ntBASIC3.82□□□□□ -1.8
DKK3Q9UBP4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.82□□□□□ -1.8
DKK3Q9UBP4 AL021368.2-201ENST00000606125 5352 ntBASIC3.82□□□□□ -1.8
DKK3Q9UBP4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
DKK3Q9UBP4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
DKK3Q9UBP4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
DKK3Q9UBP4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.81□□□□□ -1.8
DKK3Q9UBP4 NCAPGP1-201ENST00000505112 1814 ntBASIC3.81□□□□□ -1.8
DKK3Q9UBP4 AL645937.1-201ENST00000641739 1652 ntBASIC3.81□□□□□ -1.8
DKK3Q9UBP4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.81□□□□□ -1.8
DKK3Q9UBP4 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
DKK3Q9UBP4 MTND4P14-201ENST00000435799 1354 ntBASIC3.81□□□□□ -1.8
DKK3Q9UBP4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
DKK3Q9UBP4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
DKK3Q9UBP4 FRG1CP-201ENST00000358464 769 ntBASIC3.81□□□□□ -1.8
DKK3Q9UBP4 RNU6-50P-201ENST00000362356 103 ntBASIC3.81□□□□□ -1.8
DKK3Q9UBP4 RNU6-188P-201ENST00000364207 107 ntBASIC3.81□□□□□ -1.8
DKK3Q9UBP4 RNU4-66P-201ENST00000365199 138 ntBASIC3.81□□□□□ -1.8
DKK3Q9UBP4 SOD2P1-201ENST00000396543 562 ntBASIC3.81□□□□□ -1.8
DKK3Q9UBP4 TXNP7-201ENST00000406296 293 ntBASIC3.81□□□□□ -1.8
DKK3Q9UBP4 RNU6-712P-201ENST00000410558 100 ntBASIC3.81□□□□□ -1.8
DKK3Q9UBP4 AC093578.1-201ENST00000415219 368 ntBASIC3.81□□□□□ -1.8
DKK3Q9UBP4 AC068533.1-201ENST00000418542 415 ntBASIC3.81□□□□□ -1.8
DKK3Q9UBP4 AC099677.1-201ENST00000420575 175 ntBASIC3.81□□□□□ -1.8
DKK3Q9UBP4 AL139247.1-201ENST00000422768 325 ntBASIC3.81□□□□□ -1.8
DKK3Q9UBP4 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.81□□□□□ -1.8
DKK3Q9UBP4 AC087650.1-201ENST00000431445 468 ntBASIC3.81□□□□□ -1.8
DKK3Q9UBP4 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.81□□□□□ -1.8
DKK3Q9UBP4 GAPDHP27-201ENST00000447427 1020 ntBASIC3.81□□□□□ -1.8
DKK3Q9UBP4 AC008481.1-201ENST00000463278 396 ntBASIC3.81□□□□□ -1.8
DKK3Q9UBP4 AC004801.2-202ENST00000463559 283 ntBASIC3.81□□□□□ -1.8
DKK3Q9UBP4 AC022695.1-201ENST00000522089 237 ntBASIC3.81□□□□□ -1.8
DKK3Q9UBP4 AL137161.1-201ENST00000532231 390 ntBASIC3.81□□□□□ -1.8
DKK3Q9UBP4 AC093027.1-201ENST00000546698 429 ntBASIC3.81□□□□□ -1.8
DKK3Q9UBP4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.81□□□□□ -1.8
DKK3Q9UBP4 AC005668.1-201ENST00000571142 476 ntBASIC3.81□□□□□ -1.8
DKK3Q9UBP4 MIR3124-201ENST00000582636 67 ntBASIC3.81□□□□□ -1.8
DKK3Q9UBP4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.81□□□□□ -1.8
DKK3Q9UBP4 AC113139.1-201ENST00000605049 239 ntBASIC3.81□□□□□ -1.8
DKK3Q9UBP4 RNU1-30P-201ENST00000606575 163 ntBASIC3.81□□□□□ -1.8
DKK3Q9UBP4 RMST_7.1-201ENST00000621935 268 ntBASIC3.81□□□□□ -1.8
DKK3Q9UBP4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.81□□□□□ -1.8
DKK3Q9UBP4 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
DKK3Q9UBP4 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
DKK3Q9UBP4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
DKK3Q9UBP4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
DKK3Q9UBP4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
DKK3Q9UBP4 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
DKK3Q9UBP4 RNU6-629P-201ENST00000384061 103 ntBASIC3.8□□□□□ -1.8
DKK3Q9UBP4 RNU6-831P-201ENST00000384548 107 ntBASIC3.8□□□□□ -1.8
DKK3Q9UBP4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
DKK3Q9UBP4 HLFP1-201ENST00000402375 499 ntBASIC3.8□□□□□ -1.8
DKK3Q9UBP4 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.8□□□□□ -1.8
DKK3Q9UBP4 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.8□□□□□ -1.8
DKK3Q9UBP4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.8□□□□□ -1.8
DKK3Q9UBP4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.8□□□□□ -1.8
DKK3Q9UBP4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.8□□□□□ -1.8
DKK3Q9UBP4 AC018630.2-202ENST00000422992 927 ntBASIC3.8□□□□□ -1.8
DKK3Q9UBP4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.8□□□□□ -1.8
DKK3Q9UBP4 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.8□□□□□ -1.8
DKK3Q9UBP4 HMGB1P18-201ENST00000438801 619 ntBASIC3.8□□□□□ -1.8
DKK3Q9UBP4 AC007677.1-201ENST00000445757 515 ntBASIC3.8□□□□□ -1.8
DKK3Q9UBP4 SSXP4-201ENST00000451349 245 ntBASIC3.8□□□□□ -1.8
DKK3Q9UBP4 AL590639.1-201ENST00000456484 337 ntBASIC3.8□□□□□ -1.8
DKK3Q9UBP4 AL162395.1-201ENST00000457882 422 ntBASIC3.8□□□□□ -1.8
DKK3Q9UBP4 AC098591.2-201ENST00000510152 315 ntBASIC3.8□□□□□ -1.8
DKK3Q9UBP4 AC026801.2-201ENST00000515352 425 ntBASIC3.8□□□□□ -1.8
DKK3Q9UBP4 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.8□□□□□ -1.8
DKK3Q9UBP4 MTND4P7-201ENST00000523876 130 ntBASIC3.8□□□□□ -1.8
DKK3Q9UBP4 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.8□□□□□ -1.8
DKK3Q9UBP4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.8□□□□□ -1.8
DKK3Q9UBP4 AL355375.2-201ENST00000574825 175 ntBASIC3.8□□□□□ -1.8
DKK3Q9UBP4 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.8□□□□□ -1.8
DKK3Q9UBP4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.8□□□□□ -1.8
DKK3Q9UBP4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.8□□□□□ -1.8
DKK3Q9UBP4 AL022099.1-201ENST00000604551 712 ntBASIC3.8□□□□□ -1.8
DKK3Q9UBP4 AL121772.2-201ENST00000614331 297 ntBASIC3.8□□□□□ -1.8
DKK3Q9UBP4 AC110801.1-201ENST00000623590 212 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms