Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AL139098.1-201ENST00000407291 389 ntBASIC1.11□□□□□ -2.23
COMMD3Q9UBI1 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.11□□□□□ -2.23
COMMD3Q9UBI1 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.11□□□□□ -2.23
COMMD3Q9UBI1 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.11□□□□□ -2.23
COMMD3Q9UBI1 MTCYBP18-201ENST00000501056 747 ntBASIC1.11□□□□□ -2.23
COMMD3Q9UBI1 RNA5SP112-201ENST00000515937 99 ntBASIC1.11□□□□□ -2.23
COMMD3Q9UBI1 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.11□□□□□ -2.23
COMMD3Q9UBI1 AP003066.2-201ENST00000529375 555 ntBASIC1.11□□□□□ -2.23
COMMD3Q9UBI1 BPTFP1-201ENST00000579209 492 ntBASIC1.11□□□□□ -2.23
COMMD3Q9UBI1 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.11□□□□□ -2.23
COMMD3Q9UBI1 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.11□□□□□ -2.23
COMMD3Q9UBI1 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.11□□□□□ -2.23
COMMD3Q9UBI1 uc_338.14-201ENST00000613162 166 ntBASIC1.11□□□□□ -2.23
COMMD3Q9UBI1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.11□□□□□ -2.23
COMMD3Q9UBI1 AC073569.3-201ENST00000619055 682 ntBASIC1.11□□□□□ -2.23
COMMD3Q9UBI1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
COMMD3Q9UBI1 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
COMMD3Q9UBI1 AL359854.1-201ENST00000614203 1594 ntBASIC1.11□□□□□ -2.23
COMMD3Q9UBI1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
COMMD3Q9UBI1 ZNF29P-201ENST00000225587 168 ntBASIC1.1□□□□□ -2.23
COMMD3Q9UBI1 RNU6-251P-201ENST00000363235 104 ntBASIC1.1□□□□□ -2.23
COMMD3Q9UBI1 RNU6-338P-201ENST00000383888 105 ntBASIC1.1□□□□□ -2.23
COMMD3Q9UBI1 RNU2-33P-201ENST00000410344 192 ntBASIC1.1□□□□□ -2.23
COMMD3Q9UBI1 BOLA3P4-201ENST00000418151 400 ntBASIC1.1□□□□□ -2.23
COMMD3Q9UBI1 RPL30P13-201ENST00000418873 348 ntBASIC1.1□□□□□ -2.23
COMMD3Q9UBI1 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.1□□□□□ -2.23
COMMD3Q9UBI1 ZYG11AP1-201ENST00000430329 837 ntBASIC1.1□□□□□ -2.23
COMMD3Q9UBI1 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.1□□□□□ -2.23
COMMD3Q9UBI1 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.1□□□□□ -2.23
COMMD3Q9UBI1 RPL32P28-201ENST00000443577 397 ntBASIC1.1□□□□□ -2.23
COMMD3Q9UBI1 AL929288.2-201ENST00000446368 407 ntBASIC1.1□□□□□ -2.23
COMMD3Q9UBI1 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.1□□□□□ -2.23
COMMD3Q9UBI1 AC114801.2-201ENST00000503825 781 ntBASIC1.1□□□□□ -2.23
COMMD3Q9UBI1 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.1□□□□□ -2.23
COMMD3Q9UBI1 RNA5SP165-201ENST00000517142 115 ntBASIC1.1□□□□□ -2.23
COMMD3Q9UBI1 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.1□□□□□ -2.23
COMMD3Q9UBI1 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC1.1□□□□□ -2.23
COMMD3Q9UBI1 AC095057.3-201ENST00000567102 1157 ntBASIC1.1□□□□□ -2.23
COMMD3Q9UBI1 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC1.1□□□□□ -2.23
COMMD3Q9UBI1 AC024619.4-201ENST00000580924 316 ntBASIC1.1□□□□□ -2.23
COMMD3Q9UBI1 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.1□□□□□ -2.23
COMMD3Q9UBI1 AC136601.2-201ENST00000604356 474 ntBASIC1.1□□□□□ -2.23
COMMD3Q9UBI1 AC016925.2-201ENST00000605108 242 ntBASIC1.1□□□□□ -2.23
COMMD3Q9UBI1 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.1□□□□□ -2.23
COMMD3Q9UBI1 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 AC002543.1-201ENST00000299783 1954 ntBASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 RNA5SP240-201ENST00000365355 128 ntBASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 RPL23AP29-201ENST00000397284 453 ntBASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 RNU6-174P-201ENST00000410406 106 ntBASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 CCDC58P2-201ENST00000417131 366 ntBASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 EIF4EP2-201ENST00000422816 654 ntBASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 PSMA6P3-201ENST00000428242 164 ntBASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 AC005345.1-201ENST00000431868 217 ntBASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 RSU1P2-202ENST00000437884 485 ntBASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 HMGN2P10-201ENST00000448085 265 ntBASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 RNU1-123P-201ENST00000458950 160 ntBASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 AC008481.1-201ENST00000463278 396 ntBASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 FAM206BP-201ENST00000510179 541 ntBASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 RNU6-295P-201ENST00000516901 104 ntBASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 SNORD19.2-201ENST00000516978 73 ntBASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 AC011494.1-201ENST00000596454 237 ntBASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 AL035411.2-201ENST00000604022 421 ntBASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 AP003973.1-201ENST00000604639 691 ntBASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 AC004067.1-201ENST00000608733 700 ntBASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 AC091953.2-201ENST00000623979 160 ntBASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 AC092192.1-201ENST00000633154 1018 ntBASIC1.09□□□□□ -2.23
COMMD3Q9UBI1 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.09□□□□□ -2.24
COMMD3Q9UBI1 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
COMMD3Q9UBI1 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.08□□□□□ -2.24
COMMD3Q9UBI1 ZNF849P-201ENST00000594711 1566 ntBASIC1.08□□□□□ -2.24
COMMD3Q9UBI1 MTND5P11-201ENST00000511037 1812 ntBASIC1.08□□□□□ -2.24
COMMD3Q9UBI1 MIR16-1-201ENST00000385271 89 ntBASIC1.08□□□□□ -2.24
COMMD3Q9UBI1 BTF3L4P2-201ENST00000392798 346 ntBASIC1.08□□□□□ -2.24
COMMD3Q9UBI1 OR51A5P-201ENST00000415429 942 ntBASIC1.08□□□□□ -2.24
COMMD3Q9UBI1 MTND5P25-201ENST00000430499 799 ntBASIC1.08□□□□□ -2.24
COMMD3Q9UBI1 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.08□□□□□ -2.24
COMMD3Q9UBI1 HMGB3P12-201ENST00000438745 556 ntBASIC1.08□□□□□ -2.24
COMMD3Q9UBI1 RPL23AP23-201ENST00000452590 471 ntBASIC1.08□□□□□ -2.24
COMMD3Q9UBI1 NDUFA5P7-201ENST00000452914 242 ntBASIC1.08□□□□□ -2.24
COMMD3Q9UBI1 RPS29P29-201ENST00000456396 171 ntBASIC1.08□□□□□ -2.24
COMMD3Q9UBI1 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.08□□□□□ -2.24
COMMD3Q9UBI1 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.08□□□□□ -2.24
COMMD3Q9UBI1 RPS27AP10-201ENST00000496103 208 ntBASIC1.08□□□□□ -2.24
COMMD3Q9UBI1 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.08□□□□□ -2.24
COMMD3Q9UBI1 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.08□□□□□ -2.24
COMMD3Q9UBI1 SNORA4.4-201ENST00000515921 135 ntBASIC1.08□□□□□ -2.24
COMMD3Q9UBI1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms