Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.21□□□□□ -2.06
CLCF1Q9UBD9 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.21□□□□□ -2.06
CLCF1Q9UBD9 MIR3146-201ENST00000580367 79 ntBASIC2.21□□□□□ -2.06
CLCF1Q9UBD9 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.21□□□□□ -2.06
CLCF1Q9UBD9 AC005498.1-201ENST00000592125 465 ntBASIC2.21□□□□□ -2.06
CLCF1Q9UBD9 MTCYBP22-201ENST00000603788 447 ntBASIC2.21□□□□□ -2.06
CLCF1Q9UBD9 AC013412.1-201ENST00000610687 192 ntBASIC2.21□□□□□ -2.06
CLCF1Q9UBD9 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.21□□□□□ -2.06
CLCF1Q9UBD9 AC034102.8-201ENST00000615146 484 ntBASIC2.21□□□□□ -2.06
CLCF1Q9UBD9 RN7SL853P-201ENST00000617250 223 ntBASIC2.21□□□□□ -2.06
CLCF1Q9UBD9 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.21□□□□□ -2.06
CLCF1Q9UBD9 AC009159.1-201ENST00000618386 642 ntBASIC2.21□□□□□ -2.06
CLCF1Q9UBD9 AL356266.1-201ENST00000623311 483 ntBASIC2.21□□□□□ -2.06
CLCF1Q9UBD9 AC002064.3-201ENST00000623448 346 ntBASIC2.21□□□□□ -2.06
CLCF1Q9UBD9 AC017037.3-201ENST00000625016 472 ntBASIC2.21□□□□□ -2.06
CLCF1Q9UBD9 AC093591.3-201ENST00000634516 308 ntBASIC2.21□□□□□ -2.06
CLCF1Q9UBD9 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CLCF1Q9UBD9 MTND5P29-201ENST00000458676 1807 ntBASIC2.21□□□□□ -2.06
CLCF1Q9UBD9 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.21□□□□□ -2.06
CLCF1Q9UBD9 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 RNU6-1167P-201ENST00000363227 94 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 RNU6-884P-201ENST00000363889 107 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 AC006366.1-201ENST00000422002 759 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 AC011233.1-201ENST00000422812 283 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 AC009414.1-201ENST00000427200 443 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 ELOCP14-201ENST00000428070 331 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 HMGB1P27-201ENST00000431429 603 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 SNRPEP9-201ENST00000436794 238 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 ELOCP7-201ENST00000439968 331 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 Z96811.1-201ENST00000445880 108 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 ST13P20-201ENST00000447996 1065 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 AP000705.1-201ENST00000454567 350 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 RPL26P9-201ENST00000457466 433 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 MRPS17P3-201ENST00000465453 385 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 RPL23AP45-201ENST00000476406 468 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 RPF2P2-201ENST00000504693 896 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 AC009901.1-201ENST00000506703 541 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 SNORA31.15-201ENST00000516771 132 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 AC087373.1-201ENST00000524920 491 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 AC091544.4-201ENST00000555268 342 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 AC091489.2-201ENST00000566263 604 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 MTATP6P24-201ENST00000576835 677 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 AC010620.2-201ENST00000600135 313 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 DPPA3P3-201ENST00000603842 430 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 AC121334.2-201ENST00000605387 271 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 AC004223.4-201ENST00000612426 332 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 AC008498.1-201ENST00000613012 531 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 AL590808.1-201ENST00000618696 141 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 UCA1.1-201ENST00000620952 75 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 AC008993.2-201ENST00000631744 806 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 AC092192.1-201ENST00000633154 1018 ntBASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.2□□□□□ -2.06
CLCF1Q9UBD9 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 AC138915.1-201ENST00000565427 1685 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 RNA5SP289-201ENST00000362332 137 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 SNORD56.5-201ENST00000364281 72 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 RNU5A-2P-201ENST00000384337 116 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 RNU6-809P-201ENST00000384461 107 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 TAS2R15P-201ENST00000390674 928 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 NDUFS5P1-201ENST00000405668 289 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 RNA5SP508-201ENST00000411327 119 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 ZNF90P2-204ENST00000419323 1075 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 MTND4P20-201ENST00000424125 869 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 AL365184.2-201ENST00000431139 435 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 MTND1P28-201ENST00000435623 950 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 AL512286.1-201ENST00000439244 400 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 AC118469.1-201ENST00000442943 488 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 UBBP3-201ENST00000445497 241 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 AC104389.3-201ENST00000445629 235 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 WASF1P1-201ENST00000447560 1131 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 AC027673.1-201ENST00000456245 405 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 AC068587.2-201ENST00000478386 781 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms