Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 VN1R83P-201ENST00000595685 445 ntBASIC1.89□□□□□ -2.11
VAPAQ9P0L0 DPPA3P3-201ENST00000603842 430 ntBASIC1.89□□□□□ -2.11
VAPAQ9P0L0 AC093673.2-201ENST00000609674 331 ntBASIC1.89□□□□□ -2.11
VAPAQ9P0L0 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
VAPAQ9P0L0 uc_338.20-201ENST00000621563 178 ntBASIC1.89□□□□□ -2.11
VAPAQ9P0L0 DUXAP9-208ENST00000622815 614 ntBASIC1.89□□□□□ -2.11
VAPAQ9P0L0 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.89□□□□□ -2.11
VAPAQ9P0L0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.89□□□□□ -2.11
VAPAQ9P0L0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.89□□□□□ -2.11
VAPAQ9P0L0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
VAPAQ9P0L0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
VAPAQ9P0L0 AL390862.1-201ENST00000635467 1469 ntBASIC1.88□□□□□ -2.11
VAPAQ9P0L0 XGY1-201ENST00000381172 446 ntBASIC1.88□□□□□ -2.11
VAPAQ9P0L0 MIR147B-201ENST00000390185 80 ntBASIC1.88□□□□□ -2.11
VAPAQ9P0L0 SUMO2P12-201ENST00000405924 140 ntBASIC1.88□□□□□ -2.11
VAPAQ9P0L0 U6atac.2-201ENST00000408644 118 ntBASIC1.88□□□□□ -2.11
VAPAQ9P0L0 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.88□□□□□ -2.11
VAPAQ9P0L0 AL353729.1-201ENST00000425044 720 ntBASIC1.88□□□□□ -2.11
VAPAQ9P0L0 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.88□□□□□ -2.11
VAPAQ9P0L0 NANOGP2-201ENST00000435391 727 ntBASIC1.88□□□□□ -2.11
VAPAQ9P0L0 AC004383.1-201ENST00000438135 289 ntBASIC1.88□□□□□ -2.11
VAPAQ9P0L0 AC010631.1-201ENST00000474150 156 ntBASIC1.88□□□□□ -2.11
VAPAQ9P0L0 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
VAPAQ9P0L0 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.88□□□□□ -2.11
VAPAQ9P0L0 RNA5SP364-201ENST00000516938 78 ntBASIC1.88□□□□□ -2.11
VAPAQ9P0L0 AC068620.3-201ENST00000602749 560 ntBASIC1.88□□□□□ -2.11
VAPAQ9P0L0 AC091152.3-201ENST00000604227 325 ntBASIC1.88□□□□□ -2.11
VAPAQ9P0L0 Y_RNA.783-201ENST00000613546 102 ntBASIC1.88□□□□□ -2.11
VAPAQ9P0L0 SDR42E1P4-201ENST00000620894 481 ntBASIC1.88□□□□□ -2.11
VAPAQ9P0L0 AC091932.3-201ENST00000624223 323 ntBASIC1.88□□□□□ -2.11
VAPAQ9P0L0 AL359854.1-201ENST00000614203 1594 ntBASIC1.88□□□□□ -2.11
VAPAQ9P0L0 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
VAPAQ9P0L0 HSPA8P4-201ENST00000511877 1920 ntBASIC1.87□□□□□ -2.11
VAPAQ9P0L0 RNU6-658P-201ENST00000384606 106 ntBASIC1.87□□□□□ -2.11
VAPAQ9P0L0 AC069282.1-201ENST00000411911 526 ntBASIC1.87□□□□□ -2.11
VAPAQ9P0L0 RPL21P24-201ENST00000413752 448 ntBASIC1.87□□□□□ -2.11
VAPAQ9P0L0 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.87□□□□□ -2.11
VAPAQ9P0L0 AL953862.1-201ENST00000423016 168 ntBASIC1.87□□□□□ -2.11
VAPAQ9P0L0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.87□□□□□ -2.11
VAPAQ9P0L0 AC244035.1-201ENST00000430042 390 ntBASIC1.87□□□□□ -2.11
VAPAQ9P0L0 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.87□□□□□ -2.11
VAPAQ9P0L0 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.87□□□□□ -2.11
VAPAQ9P0L0 GTF2IP3-201ENST00000433887 494 ntBASIC1.87□□□□□ -2.11
VAPAQ9P0L0 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.87□□□□□ -2.11
VAPAQ9P0L0 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.87□□□□□ -2.11
VAPAQ9P0L0 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.87□□□□□ -2.11
VAPAQ9P0L0 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.87□□□□□ -2.11
VAPAQ9P0L0 AC005410.1-202ENST00000460347 485 ntBASIC1.87□□□□□ -2.11
VAPAQ9P0L0 AC104090.1-201ENST00000506341 1171 ntBASIC1.87□□□□□ -2.11
VAPAQ9P0L0 SUMO2P5-201ENST00000506790 245 ntBASIC1.87□□□□□ -2.11
VAPAQ9P0L0 AC093809.1-201ENST00000509155 340 ntBASIC1.87□□□□□ -2.11
VAPAQ9P0L0 MTND2P31-201ENST00000512602 616 ntBASIC1.87□□□□□ -2.11
VAPAQ9P0L0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
VAPAQ9P0L0 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.87□□□□□ -2.11
VAPAQ9P0L0 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.87□□□□□ -2.11
VAPAQ9P0L0 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.87□□□□□ -2.11
VAPAQ9P0L0 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.87□□□□□ -2.11
VAPAQ9P0L0 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.87□□□□□ -2.11
VAPAQ9P0L0 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.87□□□□□ -2.11
VAPAQ9P0L0 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
VAPAQ9P0L0 OR11H5P-201ENST00000554039 926 ntBASIC1.87□□□□□ -2.11
VAPAQ9P0L0 AL121821.2-201ENST00000556081 394 ntBASIC1.87□□□□□ -2.11
VAPAQ9P0L0 AC060771.1-201ENST00000582031 164 ntBASIC1.87□□□□□ -2.11
VAPAQ9P0L0 AC021171.1-201ENST00000603137 706 ntBASIC1.87□□□□□ -2.11
VAPAQ9P0L0 SNRPGP19-201ENST00000603826 189 ntBASIC1.87□□□□□ -2.11
VAPAQ9P0L0 AL161798.1-201ENST00000604630 131 ntBASIC1.87□□□□□ -2.11
VAPAQ9P0L0 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.87□□□□□ -2.11
VAPAQ9P0L0 DUSP12P1-201ENST00000612874 516 ntBASIC1.87□□□□□ -2.11
VAPAQ9P0L0 uc_338.14-201ENST00000613162 166 ntBASIC1.87□□□□□ -2.11
VAPAQ9P0L0 AC104763.3-201ENST00000613765 618 ntBASIC1.87□□□□□ -2.11
VAPAQ9P0L0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.87□□□□□ -2.11
VAPAQ9P0L0 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.87□□□□□ -2.11
VAPAQ9P0L0 MIR6873-201ENST00000622788 63 ntBASIC1.87□□□□□ -2.11
VAPAQ9P0L0 OR1S1-201ENST00000624470 978 ntBASIC1.87□□□□□ -2.11
VAPAQ9P0L0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.87□□□□□ -2.11
VAPAQ9P0L0 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.86□□□□□ -2.11
VAPAQ9P0L0 AC009487.4-201ENST00000624969 3585 ntBASIC1.86□□□□□ -2.11
VAPAQ9P0L0 RNU6-486P-201ENST00000363116 107 ntBASIC1.86□□□□□ -2.11
VAPAQ9P0L0 RNU6-853P-201ENST00000364306 107 ntBASIC1.86□□□□□ -2.11
VAPAQ9P0L0 RNU6-19P-201ENST00000384718 107 ntBASIC1.86□□□□□ -2.11
VAPAQ9P0L0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
VAPAQ9P0L0 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.86□□□□□ -2.11
VAPAQ9P0L0 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.86□□□□□ -2.11
VAPAQ9P0L0 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.86□□□□□ -2.11
VAPAQ9P0L0 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.86□□□□□ -2.11
VAPAQ9P0L0 USP9YP26-201ENST00000421008 661 ntBASIC1.86□□□□□ -2.11
VAPAQ9P0L0 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.86□□□□□ -2.11
VAPAQ9P0L0 GPM6BP2-201ENST00000432046 144 ntBASIC1.86□□□□□ -2.11
VAPAQ9P0L0 RPL36AP53-201ENST00000432891 316 ntBASIC1.86□□□□□ -2.11
VAPAQ9P0L0 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.86□□□□□ -2.11
VAPAQ9P0L0 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.86□□□□□ -2.11
VAPAQ9P0L0 SNRPEP7-201ENST00000438350 220 ntBASIC1.86□□□□□ -2.11
VAPAQ9P0L0 GPM6BP1-201ENST00000446387 144 ntBASIC1.86□□□□□ -2.11
VAPAQ9P0L0 AP001324.2-201ENST00000461163 319 ntBASIC1.86□□□□□ -2.11
VAPAQ9P0L0 AP001486.1-201ENST00000463339 476 ntBASIC1.86□□□□□ -2.11
VAPAQ9P0L0 AC069306.1-201ENST00000507006 843 ntBASIC1.86□□□□□ -2.11
VAPAQ9P0L0 AF213884.2-201ENST00000510417 903 ntBASIC1.86□□□□□ -2.11
VAPAQ9P0L0 RNA5SP112-201ENST00000515937 99 ntBASIC1.86□□□□□ -2.11
VAPAQ9P0L0 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.86□□□□□ -2.11
VAPAQ9P0L0 AC118273.2-201ENST00000532092 465 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms