Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 RN7SKP24-201ENST00000515888 284 ntBASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 ISCA1P3-201ENST00000577104 373 ntBASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 AC024619.4-201ENST00000580924 316 ntBASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 MIR3124-201ENST00000582636 67 ntBASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 AC092953.2-201ENST00000608000 699 ntBASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 DUSP12P1-201ENST00000612874 516 ntBASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 AL136981.2-201ENST00000617319 734 ntBASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
KLHL28Q9NXS3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 SNORA4.1-201ENST00000364263 144 ntBASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 SNORA6-201ENST00000384033 151 ntBASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 CYCSP48-201ENST00000417124 323 ntBASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 AL445669.1-201ENST00000426743 755 ntBASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 AC104090.1-201ENST00000506341 1171 ntBASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 MTCYBP43-201ENST00000513621 740 ntBASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 SNORD19.2-201ENST00000516978 73 ntBASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 IGLV3-17-201ENST00000519099 244 ntBASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 AC010186.2-204ENST00000537668 439 ntBASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 MRPS36P5-201ENST00000551909 298 ntBASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 BNIP3P39-201ENST00000601077 554 ntBASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 AC008121.1-201ENST00000603244 268 ntBASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 AL450336.1-201ENST00000605180 586 ntBASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 AP002791.1-201ENST00000623291 381 ntBASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 AC099654.9-201ENST00000637055 678 ntBASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
KLHL28Q9NXS3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
KLHL28Q9NXS3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
KLHL28Q9NXS3 MIR1305-201ENST00000408300 86 ntBASIC2.25□□□□□ -2.05
KLHL28Q9NXS3 NPM1P11-201ENST00000417106 855 ntBASIC2.25□□□□□ -2.05
KLHL28Q9NXS3 MORF4L1P6-201ENST00000418771 268 ntBASIC2.25□□□□□ -2.05
KLHL28Q9NXS3 ISCA1P1-201ENST00000426679 387 ntBASIC2.25□□□□□ -2.05
KLHL28Q9NXS3 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
KLHL28Q9NXS3 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.25□□□□□ -2.05
KLHL28Q9NXS3 SDR42E1P3-201ENST00000438345 502 ntBASIC2.25□□□□□ -2.05
KLHL28Q9NXS3 MTND3P1-201ENST00000441336 220 ntBASIC2.25□□□□□ -2.05
KLHL28Q9NXS3 FABP5P15-201ENST00000453566 214 ntBASIC2.25□□□□□ -2.05
KLHL28Q9NXS3 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.25□□□□□ -2.05
KLHL28Q9NXS3 AC055855.1-201ENST00000489563 579 ntBASIC2.25□□□□□ -2.05
KLHL28Q9NXS3 AC106872.3-201ENST00000495104 446 ntBASIC2.25□□□□□ -2.05
KLHL28Q9NXS3 AC026801.1-201ENST00000497178 464 ntBASIC2.25□□□□□ -2.05
KLHL28Q9NXS3 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.25□□□□□ -2.05
KLHL28Q9NXS3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.25□□□□□ -2.05
KLHL28Q9NXS3 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.25□□□□□ -2.05
KLHL28Q9NXS3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.25□□□□□ -2.05
KLHL28Q9NXS3 MIR4509-3-201ENST00000578671 94 ntBASIC2.25□□□□□ -2.05
KLHL28Q9NXS3 MIR4509-2-201ENST00000583920 94 ntBASIC2.25□□□□□ -2.05
KLHL28Q9NXS3 AC007621.1-201ENST00000604544 437 ntBASIC2.25□□□□□ -2.05
KLHL28Q9NXS3 AL021997.1-201ENST00000605757 193 ntBASIC2.25□□□□□ -2.05
KLHL28Q9NXS3 AL157392.4-201ENST00000609756 345 ntBASIC2.25□□□□□ -2.05
KLHL28Q9NXS3 MIR4509-1-201ENST00000618224 94 ntBASIC2.25□□□□□ -2.05
KLHL28Q9NXS3 MIR7157-201ENST00000635801 60 ntBASIC2.25□□□□□ -2.05
KLHL28Q9NXS3 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
KLHL28Q9NXS3 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 SNORD23.1-201ENST00000408212 104 ntBASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 PIGPP2-201ENST00000411569 458 ntBASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 MTCO2P23-201ENST00000425216 680 ntBASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 AC092648.1-201ENST00000425870 423 ntBASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 GPM6BP2-201ENST00000432046 144 ntBASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 CR769767.1-201ENST00000436337 346 ntBASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 PGBD4P3-201ENST00000440731 581 ntBASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 GPM6BP1-201ENST00000446387 144 ntBASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 HMGN2P10-201ENST00000448085 265 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms