Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.86□□□□□ -1.95
CHCHD3Q9NX63 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.86□□□□□ -1.95
CHCHD3Q9NX63 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.86□□□□□ -1.95
CHCHD3Q9NX63 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.86□□□□□ -1.95
CHCHD3Q9NX63 IGKV2-26-201ENST00000518305 343 ntBASIC2.86□□□□□ -1.95
CHCHD3Q9NX63 AC026403.1-201ENST00000518938 295 ntBASIC2.86□□□□□ -1.95
CHCHD3Q9NX63 AP003122.3-201ENST00000526316 255 ntBASIC2.86□□□□□ -1.95
CHCHD3Q9NX63 AP003181.2-201ENST00000528941 181 ntBASIC2.86□□□□□ -1.95
CHCHD3Q9NX63 AC084851.1-201ENST00000529105 249 ntBASIC2.86□□□□□ -1.95
CHCHD3Q9NX63 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.86□□□□□ -1.95
CHCHD3Q9NX63 AC107016.2-201ENST00000547968 190 ntBASIC2.86□□□□□ -1.95
CHCHD3Q9NX63 H3F3AP1-201ENST00000559984 334 ntBASIC2.86□□□□□ -1.95
CHCHD3Q9NX63 AC010546.1-201ENST00000569391 485 ntBASIC2.86□□□□□ -1.95
CHCHD3Q9NX63 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.86□□□□□ -1.95
CHCHD3Q9NX63 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CHCHD3Q9NX63 MIR3616-201ENST00000584070 92 ntBASIC2.86□□□□□ -1.95
CHCHD3Q9NX63 Z94722.1-201ENST00000604328 474 ntBASIC2.86□□□□□ -1.95
CHCHD3Q9NX63 AL162713.1-201ENST00000604480 262 ntBASIC2.86□□□□□ -1.95
CHCHD3Q9NX63 U3.45-201ENST00000607547 219 ntBASIC2.86□□□□□ -1.95
CHCHD3Q9NX63 AP001506.1-201ENST00000615444 211 ntBASIC2.86□□□□□ -1.95
CHCHD3Q9NX63 AL603839.4-201ENST00000624658 1005 ntBASIC2.86□□□□□ -1.95
CHCHD3Q9NX63 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.86□□□□□ -1.95
CHCHD3Q9NX63 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CHCHD3Q9NX63 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 FARSBP1-201ENST00000435808 1778 ntBASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 NACAP2-201ENST00000318548 624 ntBASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 RNU5E-1-201ENST00000362477 120 ntBASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 RNA5SP72-201ENST00000364442 117 ntBASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 Y_RNA.534-201ENST00000384599 112 ntBASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 U3.19-201ENST00000390893 196 ntBASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 AF228730.1-201ENST00000397972 663 ntBASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 RPS3AP36-201ENST00000398190 775 ntBASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 RNA5SP229-201ENST00000410809 99 ntBASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 RPS3AP3-201ENST00000411933 242 ntBASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 SNORD42A-201ENST00000459584 64 ntBASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 OSBPL9P5-201ENST00000542581 171 ntBASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 AC005476.1-201ENST00000554427 397 ntBASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 MIR3158-1-201ENST00000583596 81 ntBASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 AL590229.1-201ENST00000603497 542 ntBASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 AC091304.9-201ENST00000612091 226 ntBASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 AL359547.2-201ENST00000615810 418 ntBASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 AC006133.1-201ENST00000617106 264 ntBASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 AC008147.4-201ENST00000617570 1204 ntBASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 PISRT1-201ENST00000626175 531 ntBASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 CU459211.1-201ENST00000635667 749 ntBASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CHCHD3Q9NX63 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 SNORA68.1-201ENST00000364537 132 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 U8.11-201ENST00000384699 133 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 U8.12-201ENST00000384701 133 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 RNY3P9-201ENST00000384727 106 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 RNY3P10-201ENST00000384764 102 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 MIR23B-201ENST00000384832 97 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 MIR558-201ENST00000384920 94 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 SNORD17-201ENST00000390930 237 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 AL122016.1-201ENST00000403365 367 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 AL513475.1-201ENST00000406602 315 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 USP9YP6-201ENST00000413550 854 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 NPM1P11-201ENST00000417106 855 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 AL592045.1-201ENST00000429867 352 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 SNORA84-201ENST00000459229 133 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 U8.18-201ENST00000459285 133 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 RN7SL542P-201ENST00000467147 294 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 AC105252.1-201ENST00000503089 286 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 SNORA31.11-201ENST00000516528 139 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 Vault.3-201ENST00000516676 95 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 RNU6-1315P-201ENST00000517187 99 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 AP003072.2-201ENST00000527756 676 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 AC007151.1-201ENST00000572774 483 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 AC005771.1-201ENST00000585581 349 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 AC011471.1-201ENST00000585766 187 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 AC012493.2-201ENST00000595083 291 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 AC022893.3-201ENST00000607665 437 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 uc_338.25-201ENST00000613756 156 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 AC084757.4-201ENST00000616350 526 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 AC097520.1-201ENST00000624435 385 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 AL034408.1-202ENST00000636088 415 ntBASIC2.84□□□□□ -1.95
CHCHD3Q9NX63 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.84□□□□□ -1.96
CHCHD3Q9NX63 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.83□□□□□ -1.96
CHCHD3Q9NX63 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.83□□□□□ -1.96
CHCHD3Q9NX63 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms