Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 MTND3P1-201ENST00000441336 220 ntBASIC2□□□□□ -2.09
CLN6Q9NWW5 AC025750.2-201ENST00000442609 450 ntBASIC2□□□□□ -2.09
CLN6Q9NWW5 FABP5P15-201ENST00000453566 214 ntBASIC2□□□□□ -2.09
CLN6Q9NWW5 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2□□□□□ -2.09
CLN6Q9NWW5 MTATP6P14-201ENST00000455189 673 ntBASIC2□□□□□ -2.09
CLN6Q9NWW5 AC080013.2-201ENST00000460866 323 ntBASIC2□□□□□ -2.09
CLN6Q9NWW5 AC025033.1-201ENST00000463883 194 ntBASIC2□□□□□ -2.09
CLN6Q9NWW5 DYNLL1P5-201ENST00000467158 270 ntBASIC2□□□□□ -2.09
CLN6Q9NWW5 RN7SL432P-201ENST00000484057 298 ntBASIC2□□□□□ -2.09
CLN6Q9NWW5 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2□□□□□ -2.09
CLN6Q9NWW5 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2□□□□□ -2.09
CLN6Q9NWW5 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2□□□□□ -2.09
CLN6Q9NWW5 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2□□□□□ -2.09
CLN6Q9NWW5 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2□□□□□ -2.09
CLN6Q9NWW5 RNA5SP148-201ENST00000516527 94 ntBASIC2□□□□□ -2.09
CLN6Q9NWW5 RNU6-64P-201ENST00000517119 105 ntBASIC2□□□□□ -2.09
CLN6Q9NWW5 IGLV3-17-201ENST00000519099 244 ntBASIC2□□□□□ -2.09
CLN6Q9NWW5 AP005902.1-201ENST00000521358 186 ntBASIC2□□□□□ -2.09
CLN6Q9NWW5 MTCYBP20-201ENST00000524239 1129 ntBASIC2□□□□□ -2.09
CLN6Q9NWW5 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
CLN6Q9NWW5 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2□□□□□ -2.09
CLN6Q9NWW5 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2□□□□□ -2.09
CLN6Q9NWW5 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2□□□□□ -2.09
CLN6Q9NWW5 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2□□□□□ -2.09
CLN6Q9NWW5 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2□□□□□ -2.09
CLN6Q9NWW5 AL033523.1-201ENST00000605153 153 ntBASIC2□□□□□ -2.09
CLN6Q9NWW5 AC072039.2-201ENST00000608883 439 ntBASIC2□□□□□ -2.09
CLN6Q9NWW5 AC046143.2-201ENST00000609789 160 ntBASIC2□□□□□ -2.09
CLN6Q9NWW5 MIR7106-201ENST00000612419 65 ntBASIC2□□□□□ -2.09
CLN6Q9NWW5 MIR6798-201ENST00000612887 67 ntBASIC2□□□□□ -2.09
CLN6Q9NWW5 AL136981.2-201ENST00000617319 734 ntBASIC2□□□□□ -2.09
CLN6Q9NWW5 AC012150.2-201ENST00000621300 544 ntBASIC2□□□□□ -2.09
CLN6Q9NWW5 AC007490.1-201ENST00000624321 703 ntBASIC2□□□□□ -2.09
CLN6Q9NWW5 AC025048.6-202ENST00000627667 438 ntBASIC2□□□□□ -2.09
CLN6Q9NWW5 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2□□□□□ -2.09
CLN6Q9NWW5 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.99□□□□□ -2.09
CLN6Q9NWW5 OR56A5-201ENST00000340110 738 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 MIR208A-201ENST00000362287 71 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 RNU4-92P-201ENST00000363783 136 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 RNA5SP125-201ENST00000364843 120 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 RNA5SP138-201ENST00000365098 114 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.99□□□□□ -2.09
CLN6Q9NWW5 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.99□□□□□ -2.09
CLN6Q9NWW5 RNU4-52P-201ENST00000384209 138 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CLN6Q9NWW5 RNU6-278P-201ENST00000390945 109 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 AC119751.3-201ENST00000399720 670 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 AL139397.2-201ENST00000404529 772 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 MIR1305-201ENST00000408300 86 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 MTND1P23-201ENST00000416931 372 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.99□□□□□ -2.09
CLN6Q9NWW5 AC005005.2-201ENST00000420779 380 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.99□□□□□ -2.09
CLN6Q9NWW5 ISCA1P1-201ENST00000426679 387 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 RPL30P4-201ENST00000429309 333 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 FABP5P14-201ENST00000437273 393 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 SDR42E1P3-201ENST00000438345 502 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.99□□□□□ -2.09
CLN6Q9NWW5 PGBD4P3-201ENST00000440731 581 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 PTENP1-201ENST00000447117 1215 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 AL021397.1-201ENST00000451806 248 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 AL109933.2-201ENST00000452651 260 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 AC026801.1-201ENST00000497178 464 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
CLN6Q9NWW5 AC108043.1-201ENST00000512696 574 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 RNA5SP356-201ENST00000515972 94 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 MIR892C-201ENST00000516410 77 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 RPL7P20-201ENST00000520308 745 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 AP000907.2-201ENST00000530827 353 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.99□□□□□ -2.09
CLN6Q9NWW5 AL121821.2-201ENST00000556081 394 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.99□□□□□ -2.09
CLN6Q9NWW5 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.99□□□□□ -2.09
CLN6Q9NWW5 AC073544.2-201ENST00000601155 540 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 AL391001.1-201ENST00000602747 715 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CLN6Q9NWW5 AL392048.1-201ENST00000613946 534 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 AL136313.1-201ENST00000624804 202 ntBASIC1.99□□□□□ -2.09
CLN6Q9NWW5 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CLN6Q9NWW5 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.99□□□□□ -2.09
CLN6Q9NWW5 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
CLN6Q9NWW5 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CLN6Q9NWW5 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.98□□□□□ -2.09
CLN6Q9NWW5 AC004944.1-201ENST00000517807 3059 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.98□□□□□ -2.09
CLN6Q9NWW5 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CLN6Q9NWW5 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CLN6Q9NWW5 RNU6-723P-201ENST00000383973 107 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 RNU6-636P-201ENST00000384598 107 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 RNU6-19P-201ENST00000384718 107 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 SNORA48.3-201ENST00000391081 134 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 SNORD23.1-201ENST00000408212 104 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 HMGB1P11-201ENST00000413899 637 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.98□□□□□ -2.09
CLN6Q9NWW5 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.98□□□□□ -2.09
CLN6Q9NWW5 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.98□□□□□ -2.09
CLN6Q9NWW5 BX276092.3-201ENST00000424182 230 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 Z98742.2-201ENST00000431564 187 ntBASIC1.98□□□□□ -2.09
CLN6Q9NWW5 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.98□□□□□ -2.09
CLN6Q9NWW5 MTCO2P20-201ENST00000437339 673 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms