Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 AC025034.2-201ENST00000623264 286 ntBASIC5.15□□□□□ -1.59
ATG3Q9NT62 U6.114-201ENST00000636407 96 ntBASIC5.15□□□□□ -1.59
ATG3Q9NT62 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
ATG3Q9NT62 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
ATG3Q9NT62 MAPK10-253ENST00000641010 4072 ntBASIC5.15□□□□□ -1.59
ATG3Q9NT62 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ATG3Q9NT62 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ATG3Q9NT62 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ATG3Q9NT62 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
ATG3Q9NT62 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ATG3Q9NT62 RNU6-179P-201ENST00000363350 107 ntBASIC5.14□□□□□ -1.59
ATG3Q9NT62 SNORD35B-201ENST00000363660 87 ntBASIC5.14□□□□□ -1.59
ATG3Q9NT62 RNU6-61P-201ENST00000365528 109 ntBASIC5.14□□□□□ -1.59
ATG3Q9NT62 U1.1-201ENST00000384101 164 ntBASIC5.14□□□□□ -1.59
ATG3Q9NT62 SNORA24.1-201ENST00000384401 135 ntBASIC5.14□□□□□ -1.59
ATG3Q9NT62 RNA5SP219-201ENST00000390940 113 ntBASIC5.14□□□□□ -1.59
ATG3Q9NT62 RPL21P17-201ENST00000397467 475 ntBASIC5.14□□□□□ -1.59
ATG3Q9NT62 LAP3P1-201ENST00000403648 294 ntBASIC5.14□□□□□ -1.59
ATG3Q9NT62 MRPS18CP6-201ENST00000423587 223 ntBASIC5.14□□□□□ -1.59
ATG3Q9NT62 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.14□□□□□ -1.59
ATG3Q9NT62 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.14□□□□□ -1.59
ATG3Q9NT62 RPL7P46-201ENST00000425129 740 ntBASIC5.14□□□□□ -1.59
ATG3Q9NT62 SNAP23P1-201ENST00000433229 246 ntBASIC5.14□□□□□ -1.59
ATG3Q9NT62 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.14□□□□□ -1.59
ATG3Q9NT62 RAC1P7-201ENST00000445367 377 ntBASIC5.14□□□□□ -1.59
ATG3Q9NT62 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ATG3Q9NT62 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.14□□□□□ -1.59
ATG3Q9NT62 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.14□□□□□ -1.59
ATG3Q9NT62 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.14□□□□□ -1.59
ATG3Q9NT62 TBCAP3-201ENST00000512475 312 ntBASIC5.14□□□□□ -1.59
ATG3Q9NT62 RNU6-138P-201ENST00000515952 107 ntBASIC5.14□□□□□ -1.59
ATG3Q9NT62 SCARNA16.2-201ENST00000516520 172 ntBASIC5.14□□□□□ -1.59
ATG3Q9NT62 LSM6P2-201ENST00000552208 177 ntBASIC5.14□□□□□ -1.59
ATG3Q9NT62 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.14□□□□□ -1.59
ATG3Q9NT62 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC5.14□□□□□ -1.59
ATG3Q9NT62 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.14□□□□□ -1.59
ATG3Q9NT62 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.14□□□□□ -1.59
ATG3Q9NT62 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.14□□□□□ -1.59
ATG3Q9NT62 AL139395.1-201ENST00000603662 160 ntBASIC5.14□□□□□ -1.59
ATG3Q9NT62 MIR432-201ENST00000606207 94 ntBASIC5.14□□□□□ -1.59
ATG3Q9NT62 MIR7702-201ENST00000621931 59 ntBASIC5.14□□□□□ -1.59
ATG3Q9NT62 AC091953.5-201ENST00000622919 233 ntBASIC5.14□□□□□ -1.59
ATG3Q9NT62 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.14□□□□□ -1.59
ATG3Q9NT62 CYP3A51P-201ENST00000633513 256 ntBASIC5.14□□□□□ -1.59
ATG3Q9NT62 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
ATG3Q9NT62 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.14□□□□□ -1.59
ATG3Q9NT62 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
ATG3Q9NT62 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ATG3Q9NT62 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ATG3Q9NT62 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.13□□□□□ -1.59
ATG3Q9NT62 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ATG3Q9NT62 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
ATG3Q9NT62 RNU1-108P-201ENST00000362556 161 ntBASIC5.13□□□□□ -1.59
ATG3Q9NT62 RNA5SP258-201ENST00000362750 119 ntBASIC5.13□□□□□ -1.59
ATG3Q9NT62 RNU6-774P-201ENST00000363238 107 ntBASIC5.13□□□□□ -1.59
ATG3Q9NT62 Y_RNA.380-201ENST00000365663 111 ntBASIC5.13□□□□□ -1.59
ATG3Q9NT62 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
ATG3Q9NT62 AL109755.1-201ENST00000401791 649 ntBASIC5.13□□□□□ -1.59
ATG3Q9NT62 SNORA3.3-201ENST00000408712 125 ntBASIC5.13□□□□□ -1.59
ATG3Q9NT62 RNU2-23P-201ENST00000410545 195 ntBASIC5.13□□□□□ -1.59
ATG3Q9NT62 RPL7P37-201ENST00000425095 738 ntBASIC5.13□□□□□ -1.59
ATG3Q9NT62 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.13□□□□□ -1.59
ATG3Q9NT62 RPS15AP27-201ENST00000449183 343 ntBASIC5.13□□□□□ -1.59
ATG3Q9NT62 HMGB3P30-201ENST00000457863 606 ntBASIC5.13□□□□□ -1.59
ATG3Q9NT62 SCARNA18-201ENST00000459004 134 ntBASIC5.13□□□□□ -1.59
ATG3Q9NT62 AP001992.1-205ENST00000462248 379 ntBASIC5.13□□□□□ -1.59
ATG3Q9NT62 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.13□□□□□ -1.59
ATG3Q9NT62 PPIAP15-201ENST00000479662 484 ntBASIC5.13□□□□□ -1.59
ATG3Q9NT62 AC022447.4-201ENST00000504053 364 ntBASIC5.13□□□□□ -1.59
ATG3Q9NT62 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.13□□□□□ -1.59
ATG3Q9NT62 RNU6-1023P-201ENST00000516137 106 ntBASIC5.13□□□□□ -1.59
ATG3Q9NT62 AC024224.1-201ENST00000538284 609 ntBASIC5.13□□□□□ -1.59
ATG3Q9NT62 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.13□□□□□ -1.59
ATG3Q9NT62 SETP2-201ENST00000553886 926 ntBASIC5.13□□□□□ -1.59
ATG3Q9NT62 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.13□□□□□ -1.59
ATG3Q9NT62 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.13□□□□□ -1.59
ATG3Q9NT62 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.13□□□□□ -1.59
ATG3Q9NT62 AC019176.2-201ENST00000611579 315 ntBASIC5.13□□□□□ -1.59
ATG3Q9NT62 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.13□□□□□ -1.59
ATG3Q9NT62 ATP5A1P2-202ENST00000616464 443 ntBASIC5.13□□□□□ -1.59
ATG3Q9NT62 MIR7154-201ENST00000620673 73 ntBASIC5.13□□□□□ -1.59
ATG3Q9NT62 AL138713.1-201ENST00000624026 2130 ntBASIC5.13□□□□□ -1.59
ATG3Q9NT62 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ATG3Q9NT62 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
ATG3Q9NT62 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ATG3Q9NT62 AC074029.4-201ENST00000624796 1859 ntBASIC5.13□□□□□ -1.59
ATG3Q9NT62 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.13□□□□□ -1.59
ATG3Q9NT62 Y_RNA.14-201ENST00000362415 103 ntBASIC5.12□□□□□ -1.59
ATG3Q9NT62 Y_RNA.26-201ENST00000362539 101 ntBASIC5.12□□□□□ -1.59
ATG3Q9NT62 RNU6-188P-201ENST00000364207 107 ntBASIC5.12□□□□□ -1.59
ATG3Q9NT62 RNU6-1127P-201ENST00000384580 107 ntBASIC5.12□□□□□ -1.59
ATG3Q9NT62 RPS23P10-201ENST00000416185 486 ntBASIC5.12□□□□□ -1.59
ATG3Q9NT62 AC139712.2-201ENST00000424302 339 ntBASIC5.12□□□□□ -1.59
ATG3Q9NT62 TRBV26-201ENST00000456572 344 ntBASIC5.12□□□□□ -1.59
ATG3Q9NT62 AC114801.2-201ENST00000503825 781 ntBASIC5.12□□□□□ -1.59
ATG3Q9NT62 AC110768.1-201ENST00000509222 400 ntBASIC5.12□□□□□ -1.59
ATG3Q9NT62 RNU6-475P-201ENST00000516073 104 ntBASIC5.12□□□□□ -1.59
ATG3Q9NT62 IGKV2-23-201ENST00000518729 323 ntBASIC5.12□□□□□ -1.59
ATG3Q9NT62 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.12□□□□□ -1.59
ATG3Q9NT62 AC069240.1-201ENST00000548774 375 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms