Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.73□□□□□ -1.97
HPS4Q9NQG7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HPS4Q9NQG7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
HPS4Q9NQG7 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HPS4Q9NQG7 SET-203ENST00000372688 801 ntTSL 2 BASIC2.73□□□□□ -1.97
HPS4Q9NQG7 RPS20P2-201ENST00000402520 389 ntBASIC2.73□□□□□ -1.97
HPS4Q9NQG7 RPL7P37-201ENST00000425095 738 ntBASIC2.73□□□□□ -1.97
HPS4Q9NQG7 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.73□□□□□ -1.97
HPS4Q9NQG7 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.73□□□□□ -1.97
HPS4Q9NQG7 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.73□□□□□ -1.97
HPS4Q9NQG7 TIMM9P1-201ENST00000436122 256 ntBASIC2.73□□□□□ -1.97
HPS4Q9NQG7 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.73□□□□□ -1.97
HPS4Q9NQG7 AC009961.3-201ENST00000449832 765 ntBASIC2.73□□□□□ -1.97
HPS4Q9NQG7 ART2BP-201ENST00000453501 499 ntBASIC2.73□□□□□ -1.97
HPS4Q9NQG7 AC108059.3-201ENST00000456388 214 ntBASIC2.73□□□□□ -1.97
HPS4Q9NQG7 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.73□□□□□ -1.97
HPS4Q9NQG7 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.73□□□□□ -1.97
HPS4Q9NQG7 RNU7-23P-201ENST00000459465 62 ntBASIC2.73□□□□□ -1.97
HPS4Q9NQG7 TRBV12-1-201ENST00000479785 344 ntBASIC2.73□□□□□ -1.97
HPS4Q9NQG7 AL160314.1-201ENST00000490836 438 ntBASIC2.73□□□□□ -1.97
HPS4Q9NQG7 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HPS4Q9NQG7 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.73□□□□□ -1.97
HPS4Q9NQG7 AC103810.1-201ENST00000579873 453 ntBASIC2.73□□□□□ -1.97
HPS4Q9NQG7 NIFKP6-201ENST00000598115 845 ntBASIC2.73□□□□□ -1.97
HPS4Q9NQG7 CLIC4P2-201ENST00000601934 717 ntBASIC2.73□□□□□ -1.97
HPS4Q9NQG7 AC239868.4-201ENST00000608318 671 ntBASIC2.73□□□□□ -1.97
HPS4Q9NQG7 FTX_3.1-201ENST00000610451 147 ntBASIC2.73□□□□□ -1.97
HPS4Q9NQG7 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.73□□□□□ -1.97
HPS4Q9NQG7 AL356266.1-201ENST00000623311 483 ntBASIC2.73□□□□□ -1.97
HPS4Q9NQG7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HPS4Q9NQG7 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HPS4Q9NQG7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
HPS4Q9NQG7 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HPS4Q9NQG7 MIR1261-201ENST00000408659 82 ntBASIC2.72□□□□□ -1.97
HPS4Q9NQG7 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.72□□□□□ -1.97
HPS4Q9NQG7 AC107081.1-201ENST00000414975 361 ntBASIC2.72□□□□□ -1.97
HPS4Q9NQG7 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.72□□□□□ -1.97
HPS4Q9NQG7 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.72□□□□□ -1.97
HPS4Q9NQG7 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.72□□□□□ -1.97
HPS4Q9NQG7 UBE2D3P1-201ENST00000436669 444 ntBASIC2.72□□□□□ -1.97
HPS4Q9NQG7 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.72□□□□□ -1.97
HPS4Q9NQG7 RPL12P25-201ENST00000455592 494 ntBASIC2.72□□□□□ -1.97
HPS4Q9NQG7 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.72□□□□□ -1.97
HPS4Q9NQG7 RPS27P26-201ENST00000494583 239 ntBASIC2.72□□□□□ -1.97
HPS4Q9NQG7 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
HPS4Q9NQG7 AC113155.1-201ENST00000511141 769 ntBASIC2.72□□□□□ -1.97
HPS4Q9NQG7 AC008413.1-201ENST00000511864 177 ntBASIC2.72□□□□□ -1.97
HPS4Q9NQG7 RNU1-41P-201ENST00000516161 162 ntBASIC2.72□□□□□ -1.97
HPS4Q9NQG7 RNA5SP282-201ENST00000516355 108 ntBASIC2.72□□□□□ -1.97
HPS4Q9NQG7 RNU1-48P-201ENST00000516400 162 ntBASIC2.72□□□□□ -1.97
HPS4Q9NQG7 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.72□□□□□ -1.97
HPS4Q9NQG7 AC109329.2-201ENST00000519658 482 ntBASIC2.72□□□□□ -1.97
HPS4Q9NQG7 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.72□□□□□ -1.97
HPS4Q9NQG7 AP001646.1-201ENST00000527936 915 ntBASIC2.72□□□□□ -1.97
HPS4Q9NQG7 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HPS4Q9NQG7 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.72□□□□□ -1.97
HPS4Q9NQG7 AL391261.3-201ENST00000557194 520 ntBASIC2.72□□□□□ -1.97
HPS4Q9NQG7 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.72□□□□□ -1.97
HPS4Q9NQG7 MTCYBP22-201ENST00000603788 447 ntBASIC2.72□□□□□ -1.97
HPS4Q9NQG7 DPPA3P3-201ENST00000603842 430 ntBASIC2.72□□□□□ -1.97
HPS4Q9NQG7 AC005046.1-201ENST00000608515 625 ntBASIC2.72□□□□□ -1.97
HPS4Q9NQG7 AL391813.2-201ENST00000609113 322 ntBASIC2.72□□□□□ -1.97
HPS4Q9NQG7 AC090970.3-201ENST00000612566 866 ntBASIC2.72□□□□□ -1.97
HPS4Q9NQG7 AL590808.1-201ENST00000618696 141 ntBASIC2.72□□□□□ -1.97
HPS4Q9NQG7 AC006927.3-201ENST00000638789 384 ntBASIC2.72□□□□□ -1.97
HPS4Q9NQG7 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
HPS4Q9NQG7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
HPS4Q9NQG7 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.72□□□□□ -1.97
HPS4Q9NQG7 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.72□□□□□ -1.97
HPS4Q9NQG7 Y_RNA.169-201ENST00000363745 96 ntBASIC2.71□□□□□ -1.98
HPS4Q9NQG7 RNU6-809P-201ENST00000384461 107 ntBASIC2.71□□□□□ -1.98
HPS4Q9NQG7 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.71□□□□□ -1.98
HPS4Q9NQG7 BTF3L4P3-201ENST00000418879 476 ntBASIC2.71□□□□□ -1.98
HPS4Q9NQG7 AL358075.3-201ENST00000426289 226 ntBASIC2.71□□□□□ -1.98
HPS4Q9NQG7 MTND5P25-201ENST00000430499 799 ntBASIC2.71□□□□□ -1.98
HPS4Q9NQG7 FCF1P1-201ENST00000432690 571 ntBASIC2.71□□□□□ -1.98
HPS4Q9NQG7 AC013267.1-201ENST00000458227 267 ntBASIC2.71□□□□□ -1.98
HPS4Q9NQG7 RPS3AP22-201ENST00000488297 769 ntBASIC2.71□□□□□ -1.98
HPS4Q9NQG7 MRPS33P3-201ENST00000513456 322 ntBASIC2.71□□□□□ -1.98
HPS4Q9NQG7 RN7SKP258-201ENST00000517151 304 ntBASIC2.71□□□□□ -1.98
HPS4Q9NQG7 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.71□□□□□ -1.98
HPS4Q9NQG7 RPL7P20-201ENST00000520308 745 ntBASIC2.71□□□□□ -1.98
HPS4Q9NQG7 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.71□□□□□ -1.98
HPS4Q9NQG7 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
HPS4Q9NQG7 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.71□□□□□ -1.98
HPS4Q9NQG7 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.71□□□□□ -1.98
HPS4Q9NQG7 AC123904.2-201ENST00000548059 300 ntBASIC2.71□□□□□ -1.98
HPS4Q9NQG7 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.71□□□□□ -1.98
HPS4Q9NQG7 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.71□□□□□ -1.98
HPS4Q9NQG7 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.71□□□□□ -1.98
HPS4Q9NQG7 PCMTD1P2-201ENST00000565017 355 ntBASIC2.71□□□□□ -1.98
HPS4Q9NQG7 AC091489.2-201ENST00000566263 604 ntBASIC2.71□□□□□ -1.98
HPS4Q9NQG7 AC012435.1-202ENST00000568772 240 ntBASIC2.71□□□□□ -1.98
HPS4Q9NQG7 MIR3146-201ENST00000580367 79 ntBASIC2.71□□□□□ -1.98
HPS4Q9NQG7 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.71□□□□□ -1.98
HPS4Q9NQG7 KC877982.1-201ENST00000602313 470 ntBASIC2.71□□□□□ -1.98
HPS4Q9NQG7 AL360219.1-201ENST00000610230 366 ntBASIC2.71□□□□□ -1.98
HPS4Q9NQG7 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.71□□□□□ -1.98
HPS4Q9NQG7 AC009159.1-201ENST00000618386 642 ntBASIC2.71□□□□□ -1.98
HPS4Q9NQG7 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 179.3 ms