Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC109927.2-201ENST00000506416 303 ntBASIC2.99□□□□□ -1.93
SIX2Q9NPC8 HIGD1AP13-201ENST00000509878 289 ntBASIC2.99□□□□□ -1.93
SIX2Q9NPC8 AC004062.1-201ENST00000509926 645 ntBASIC2.99□□□□□ -1.93
SIX2Q9NPC8 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.99□□□□□ -1.93
SIX2Q9NPC8 RNA5SP309-201ENST00000516670 106 ntBASIC2.99□□□□□ -1.93
SIX2Q9NPC8 ERHP1-201ENST00000523006 310 ntBASIC2.99□□□□□ -1.93
SIX2Q9NPC8 SNRPGP16-201ENST00000533275 226 ntBASIC2.99□□□□□ -1.93
SIX2Q9NPC8 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.99□□□□□ -1.93
SIX2Q9NPC8 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.99□□□□□ -1.93
SIX2Q9NPC8 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.99□□□□□ -1.93
SIX2Q9NPC8 AL359212.1-201ENST00000556608 614 ntBASIC2.99□□□□□ -1.93
SIX2Q9NPC8 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.99□□□□□ -1.93
SIX2Q9NPC8 ZNF861P-201ENST00000588126 639 ntBASIC2.99□□□□□ -1.93
SIX2Q9NPC8 AF038458.1-201ENST00000588406 262 ntBASIC2.99□□□□□ -1.93
SIX2Q9NPC8 AC025449.1-201ENST00000603896 529 ntBASIC2.99□□□□□ -1.93
SIX2Q9NPC8 Z84480.1-201ENST00000605131 311 ntBASIC2.99□□□□□ -1.93
SIX2Q9NPC8 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.99□□□□□ -1.93
SIX2Q9NPC8 AP002360.4-201ENST00000606980 481 ntBASIC2.99□□□□□ -1.93
SIX2Q9NPC8 AP001330.5-201ENST00000607176 411 ntBASIC2.99□□□□□ -1.93
SIX2Q9NPC8 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.99□□□□□ -1.93
SIX2Q9NPC8 AC139792.3-201ENST00000623525 224 ntBASIC2.99□□□□□ -1.93
SIX2Q9NPC8 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.99□□□□□ -1.93
SIX2Q9NPC8 MIR6733-201ENST00000635723 61 ntBASIC2.99□□□□□ -1.93
SIX2Q9NPC8 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
SIX2Q9NPC8 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SIX2Q9NPC8 AC092326.2-201ENST00000624772 1561 ntBASIC2.99□□□□□ -1.93
SIX2Q9NPC8 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC2.99□□□□□ -1.93
SIX2Q9NPC8 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.98□□□□□ -1.93
SIX2Q9NPC8 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SIX2Q9NPC8 RNU6-1085P-201ENST00000363576 107 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 Y_RNA.248-201ENST00000364501 109 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 RNU5E-6P-201ENST00000365574 115 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 Y_RNA.450-201ENST00000384198 113 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 MIR1-2-201ENST00000384961 85 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 MIR607-201ENST00000385241 96 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 RPS4XP8-201ENST00000402039 771 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 RN7SKP123-201ENST00000410732 291 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.98□□□□□ -1.93
SIX2Q9NPC8 AC093151.1-201ENST00000427711 313 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 RPL21P40-201ENST00000428586 483 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 AC022018.1-201ENST00000430685 241 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 MRPS10P2-201ENST00000431226 381 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 RPS20P5-201ENST00000434808 360 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.98□□□□□ -1.93
SIX2Q9NPC8 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.98□□□□□ -1.93
SIX2Q9NPC8 AL135938.1-201ENST00000443141 297 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 MTATP6P30-201ENST00000443540 664 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 MRPL50P4-201ENST00000446432 475 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.98□□□□□ -1.93
SIX2Q9NPC8 snoU13.4-201ENST00000458916 104 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 SNORD97-201ENST00000459187 142 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 RPL31P13-201ENST00000484151 370 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 RPL23AP55-201ENST00000498163 452 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 VN1R104P-201ENST00000505115 1009 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 AC005921.1-201ENST00000510589 286 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.98□□□□□ -1.93
SIX2Q9NPC8 SNORA9.3-201ENST00000516383 129 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 Y_RNA.693-201ENST00000516641 110 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 RNU6-1073P-201ENST00000517182 106 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.98□□□□□ -1.93
SIX2Q9NPC8 HMGB1P41-201ENST00000520234 440 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.98□□□□□ -1.93
SIX2Q9NPC8 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.98□□□□□ -1.93
SIX2Q9NPC8 OR5AQ1P-201ENST00000527596 927 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.98□□□□□ -1.93
SIX2Q9NPC8 AL512310.1-201ENST00000548639 172 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 AC079600.2-201ENST00000550076 130 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.98□□□□□ -1.93
SIX2Q9NPC8 OR4H12P-201ENST00000556269 907 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.98□□□□□ -1.93
SIX2Q9NPC8 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.98□□□□□ -1.93
SIX2Q9NPC8 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.98□□□□□ -1.93
SIX2Q9NPC8 AC007363.1-201ENST00000604736 620 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 AC103710.3-201ENST00000608157 948 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
SIX2Q9NPC8 AL162274.2-201ENST00000614406 332 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 AC007014.2-201ENST00000615581 479 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 AC006111.3-201ENST00000622137 383 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 AC005609.4-201ENST00000625071 447 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 MIR3688-2-201ENST00000636963 87 ntBASIC2.98□□□□□ -1.93
SIX2Q9NPC8 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.98□□□□□ -1.93
SIX2Q9NPC8 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.98□□□□□ -1.93
SIX2Q9NPC8 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SIX2Q9NPC8 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
SIX2Q9NPC8 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.98□□□□□ -1.93
SIX2Q9NPC8 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SIX2Q9NPC8 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SIX2Q9NPC8 MIR26A1-201ENST00000362205 77 ntBASIC2.97□□□□□ -1.93
SIX2Q9NPC8 RNU6-1120P-201ENST00000362988 108 ntBASIC2.97□□□□□ -1.93
SIX2Q9NPC8 Y_RNA.256-201ENST00000364594 104 ntBASIC2.97□□□□□ -1.93
SIX2Q9NPC8 RNA5SP167-201ENST00000365461 116 ntBASIC2.97□□□□□ -1.93
SIX2Q9NPC8 Y_RNA.367-201ENST00000365544 101 ntBASIC2.97□□□□□ -1.93
SIX2Q9NPC8 SNORA36C-201ENST00000384289 132 ntBASIC2.97□□□□□ -1.93
SIX2Q9NPC8 AC068050.1-201ENST00000394891 380 ntBASIC2.97□□□□□ -1.93
SIX2Q9NPC8 TXNP7-201ENST00000406296 293 ntBASIC2.97□□□□□ -1.93
SIX2Q9NPC8 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.97□□□□□ -1.93
SIX2Q9NPC8 MTND1P23-201ENST00000416931 372 ntBASIC2.97□□□□□ -1.93
SIX2Q9NPC8 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.97□□□□□ -1.93
SIX2Q9NPC8 USP12PX-201ENST00000432383 1057 ntBASIC2.97□□□□□ -1.93
SIX2Q9NPC8 AL138799.3-201ENST00000438968 350 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms