Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 PHKBP1-201ENST00000450951 1951 ntBASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 AC233263.6-201ENST00000631132 1963 ntBASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.91□□□□□ -1.78
SEC61A2Q9H9S3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
SEC61A2Q9H9S3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
SEC61A2Q9H9S3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SEC61A2Q9H9S3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.9□□□□□ -1.78
SEC61A2Q9H9S3 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
SEC61A2Q9H9S3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SEC61A2Q9H9S3 AC025031.4-201ENST00000621248 3271 ntBASIC3.9□□□□□ -1.78
SEC61A2Q9H9S3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 AC010615.1-201ENST00000594254 1764 ntBASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 Y_RNA.26-201ENST00000362539 101 ntBASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 RN7SKP224-201ENST00000364140 325 ntBASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 Y_RNA.483-201ENST00000384380 101 ntBASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 ELOCP19-201ENST00000411919 318 ntBASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 RPL18P10-201ENST00000425606 538 ntBASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 RPS3AP12-201ENST00000443616 753 ntBASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 AL360271.2-201ENST00000447710 161 ntBASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 RNU6-1132P-201ENST00000459214 107 ntBASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 RNU6-914P-201ENST00000516749 109 ntBASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 AC069113.1-201ENST00000517763 267 ntBASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 IGLV3-26-201ENST00000520756 302 ntBASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 CBX3P8-201ENST00000532412 525 ntBASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 SNRPGP16-201ENST00000533275 226 ntBASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 AC023157.2-201ENST00000540596 141 ntBASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 MIR4277-201ENST00000578298 84 ntBASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 OR1M4P-201ENST00000589199 287 ntBASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 AC067852.4-201ENST00000590314 478 ntBASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 AL160281.1-201ENST00000605307 311 ntBASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 HMGN2P28-201ENST00000606102 262 ntBASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 AC131238.1-201ENST00000617135 328 ntBASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.9□□□□□ -1.79
SEC61A2Q9H9S3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 Y_RNA.64-201ENST00000362845 102 ntBASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 RNU6-806P-201ENST00000365147 105 ntBASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 RNU6-209P-201ENST00000384118 107 ntBASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 Y_RNA.477-201ENST00000384352 108 ntBASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 RNU4-70P-201ENST00000384579 139 ntBASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 RNU6-817P-201ENST00000391083 104 ntBASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 RPL23AP48-201ENST00000406913 488 ntBASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 RN7SKP167-201ENST00000411047 285 ntBASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 RNA5SP39-201ENST00000411245 120 ntBASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 RPL7AP73-201ENST00000413490 353 ntBASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 AC108032.1-201ENST00000416706 207 ntBASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 AL138785.1-201ENST00000425821 331 ntBASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 HMGB1P27-201ENST00000431429 603 ntBASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 AC011998.1-201ENST00000433403 117 ntBASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 PRDX3P3-201ENST00000447765 522 ntBASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 FO393415.2-201ENST00000480085 343 ntBASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 RN7SL812P-201ENST00000493791 279 ntBASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 AC083829.1-201ENST00000503756 657 ntBASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 AC008694.2-201ENST00000517591 306 ntBASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 MIR3128-201ENST00000581957 66 ntBASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 MIR4273-201ENST00000582824 84 ntBASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 AC016727.2-201ENST00000603988 621 ntBASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 MIR4727-201ENST00000622232 55 ntBASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SEC61A2Q9H9S3 AC125257.1-201ENST00000560400 2930 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 AC008669.1-201ENST00000565823 2178 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 RNU1-15P-201ENST00000353977 144 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 Y_RNA.214-201ENST00000364201 112 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 RNU4-42P-201ENST00000364738 142 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 Y_RNA.350-201ENST00000365409 98 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms