Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 OR5J1P-201ENST00000313544 939 ntBASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 SNORA63.1-201ENST00000362493 131 ntBASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 RNU6-884P-201ENST00000363889 107 ntBASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 Y_RNA.201-201ENST00000364052 96 ntBASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 RNU5E-6P-201ENST00000365574 115 ntBASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 SMIM11P1-201ENST00000369586 178 ntBASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 AL451062.2-201ENST00000427515 271 ntBASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 AC104651.1-201ENST00000427559 735 ntBASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 AC097713.2-201ENST00000430199 356 ntBASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 HMGB1P27-201ENST00000431429 603 ntBASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 AL159987.2-201ENST00000432754 307 ntBASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 AC098826.1-201ENST00000433943 471 ntBASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 AC013267.1-201ENST00000458227 267 ntBASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 RNA5SP269-201ENST00000459032 137 ntBASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 RAC1P5-201ENST00000512182 576 ntBASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 RNU2-10P-201ENST00000516375 211 ntBASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 AL356057.1-201ENST00000533798 831 ntBASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 HMGB1P14-201ENST00000557424 591 ntBASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 MIR4635-201ENST00000583759 79 ntBASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 AC073544.2-201ENST00000601155 540 ntBASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 AL161798.1-201ENST00000604630 131 ntBASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 AC004805.2-201ENST00000605382 482 ntBASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 AC011890.2-201ENST00000613393 294 ntBASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VIPAS39Q9H9C1 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 RNU1-138P-201ENST00000384093 164 ntBASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 MIR7-3-201ENST00000384898 110 ntBASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 RPL23AP32-201ENST00000395315 459 ntBASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 MTCO2P16-201ENST00000436962 677 ntBASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 AC006028.1-201ENST00000438379 402 ntBASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 USP9YP29-201ENST00000445112 563 ntBASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 GAPDHP17-201ENST00000449858 1001 ntBASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 SNORD97-201ENST00000459187 142 ntBASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 snoU109.1-201ENST00000459339 135 ntBASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 RN7SL432P-201ENST00000484057 298 ntBASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 AC008885.1-201ENST00000514930 301 ntBASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 SNORA74D-201ENST00000516404 141 ntBASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 AC011979.2-201ENST00000527568 352 ntBASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 MIR4429-201ENST00000580105 73 ntBASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 AC040904.1-201ENST00000590850 223 ntBASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 RPL12P50-201ENST00000603116 116 ntBASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 AL161729.4-201ENST00000604650 476 ntBASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 MIR92B-201ENST00000607575 96 ntBASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 AC098614.4-201ENST00000607601 462 ntBASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 FTX_3.1-201ENST00000610451 147 ntBASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 AC034102.8-201ENST00000615146 484 ntBASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 AC108479.2-201ENST00000617314 601 ntBASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 FO624990.1-201ENST00000636373 85 ntBASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 TEX21P-201ENST00000447107 1476 ntBASIC2.71□□□□□ -1.98
VIPAS39Q9H9C1 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
VIPAS39Q9H9C1 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
VIPAS39Q9H9C1 RNA5SP139-201ENST00000364340 117 ntBASIC2.7□□□□□ -1.98
VIPAS39Q9H9C1 SNORA20.2-201ENST00000383922 131 ntBASIC2.7□□□□□ -1.98
VIPAS39Q9H9C1 SNORD116-1-201ENST00000384335 95 ntBASIC2.7□□□□□ -1.98
VIPAS39Q9H9C1 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.7□□□□□ -1.98
VIPAS39Q9H9C1 BX295541.1-201ENST00000417774 250 ntBASIC2.7□□□□□ -1.98
VIPAS39Q9H9C1 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.7□□□□□ -1.98
VIPAS39Q9H9C1 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
VIPAS39Q9H9C1 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.7□□□□□ -1.98
VIPAS39Q9H9C1 UBBP3-201ENST00000445497 241 ntBASIC2.7□□□□□ -1.98
VIPAS39Q9H9C1 SNRPFP4-201ENST00000456366 242 ntBASIC2.7□□□□□ -1.98
VIPAS39Q9H9C1 RPL37P6-201ENST00000460682 294 ntBASIC2.7□□□□□ -1.98
VIPAS39Q9H9C1 AC009901.1-201ENST00000506703 541 ntBASIC2.7□□□□□ -1.98
VIPAS39Q9H9C1 SNORA18.6-201ENST00000516792 115 ntBASIC2.7□□□□□ -1.98
VIPAS39Q9H9C1 RNU6-1092P-201ENST00000516955 87 ntBASIC2.7□□□□□ -1.98
VIPAS39Q9H9C1 RNA5SP165-201ENST00000517142 115 ntBASIC2.7□□□□□ -1.98
VIPAS39Q9H9C1 AC087241.2-201ENST00000535801 324 ntBASIC2.7□□□□□ -1.98
VIPAS39Q9H9C1 MIR3913-1-201ENST00000577744 102 ntBASIC2.7□□□□□ -1.98
VIPAS39Q9H9C1 MIR3167-201ENST00000579623 85 ntBASIC2.7□□□□□ -1.98
VIPAS39Q9H9C1 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.7□□□□□ -1.98
VIPAS39Q9H9C1 HMGN2P15-201ENST00000585707 270 ntBASIC2.7□□□□□ -1.98
VIPAS39Q9H9C1 AL670379.6-201ENST00000603753 252 ntBASIC2.7□□□□□ -1.98
VIPAS39Q9H9C1 AL670379.11-201ENST00000604059 253 ntBASIC2.7□□□□□ -1.98
VIPAS39Q9H9C1 AC008162.1-201ENST00000604718 254 ntBASIC2.7□□□□□ -1.98
VIPAS39Q9H9C1 AL670379.1-201ENST00000604752 252 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms