Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.57□□□□□ -1.84
EBF3Q9H4W6 GMPSP1-201ENST00000514075 579 ntBASIC3.57□□□□□ -1.84
EBF3Q9H4W6 Vault.1-201ENST00000516474 102 ntBASIC3.57□□□□□ -1.84
EBF3Q9H4W6 RNU6-579P-201ENST00000516879 102 ntBASIC3.57□□□□□ -1.84
EBF3Q9H4W6 RNA5SP337-201ENST00000517007 109 ntBASIC3.57□□□□□ -1.84
EBF3Q9H4W6 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.57□□□□□ -1.84
EBF3Q9H4W6 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.57□□□□□ -1.84
EBF3Q9H4W6 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.57□□□□□ -1.84
EBF3Q9H4W6 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.57□□□□□ -1.84
EBF3Q9H4W6 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.57□□□□□ -1.84
EBF3Q9H4W6 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.57□□□□□ -1.84
EBF3Q9H4W6 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.57□□□□□ -1.84
EBF3Q9H4W6 RPL21P12-201ENST00000559810 515 ntBASIC3.57□□□□□ -1.84
EBF3Q9H4W6 AC026464.5-201ENST00000562497 722 ntBASIC3.57□□□□□ -1.84
EBF3Q9H4W6 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
EBF3Q9H4W6 MIR5047-201ENST00000579212 100 ntBASIC3.57□□□□□ -1.84
EBF3Q9H4W6 SNRPGP17-201ENST00000603780 214 ntBASIC3.57□□□□□ -1.84
EBF3Q9H4W6 YPEL5P2-201ENST00000605553 359 ntBASIC3.57□□□□□ -1.84
EBF3Q9H4W6 RNA5SP108-201ENST00000605921 117 ntBASIC3.57□□□□□ -1.84
EBF3Q9H4W6 AC012531.5-201ENST00000611375 151 ntBASIC3.57□□□□□ -1.84
EBF3Q9H4W6 MIR8057-201ENST00000620957 69 ntBASIC3.57□□□□□ -1.84
EBF3Q9H4W6 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.57□□□□□ -1.84
EBF3Q9H4W6 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.57□□□□□ -1.84
EBF3Q9H4W6 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.57□□□□□ -1.84
EBF3Q9H4W6 AC093908.1-201ENST00000623125 8092 ntBASIC3.57□□□□□ -1.84
EBF3Q9H4W6 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
EBF3Q9H4W6 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.56□□□□□ -1.84
EBF3Q9H4W6 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
EBF3Q9H4W6 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
EBF3Q9H4W6 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
EBF3Q9H4W6 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
EBF3Q9H4W6 AL353746.1-201ENST00000566293 6881 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 MIR30E-201ENST00000362104 92 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 MIR369-201ENST00000362155 70 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 Y_RNA.146-201ENST00000363549 102 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 Y_RNA.255-201ENST00000364581 97 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 RNU6-1160P-201ENST00000384546 104 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 MIR124-3-201ENST00000384866 87 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 RNU6-510P-201ENST00000391239 108 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 RNU6-55P-201ENST00000411092 107 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 RN7SKP140-201ENST00000411196 284 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 RNU6-954P-201ENST00000411355 107 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 RPS15AP12-201ENST00000419498 388 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 MTND3P2-201ENST00000438452 342 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 RPL29P29-201ENST00000448725 423 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 AC073415.1-201ENST00000449240 153 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 MTND1P9-201ENST00000453775 944 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 snoU109.4-201ENST00000458953 143 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 Y_RNA.639-201ENST00000458981 102 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 RNU7-63P-201ENST00000459054 62 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.56□□□□□ -1.84
EBF3Q9H4W6 RPL7P42-201ENST00000481005 679 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.56□□□□□ -1.84
EBF3Q9H4W6 HIGD1AP3-201ENST00000515857 278 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 IGKV2D-36-201ENST00000518643 226 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.56□□□□□ -1.84
EBF3Q9H4W6 AP000907.2-201ENST00000530827 353 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
EBF3Q9H4W6 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.56□□□□□ -1.84
EBF3Q9H4W6 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.56□□□□□ -1.84
EBF3Q9H4W6 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.56□□□□□ -1.84
EBF3Q9H4W6 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.56□□□□□ -1.84
EBF3Q9H4W6 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.56□□□□□ -1.84
EBF3Q9H4W6 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.56□□□□□ -1.84
EBF3Q9H4W6 MIR3146-201ENST00000580367 79 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 AC060771.1-201ENST00000582031 164 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 AC012493.2-201ENST00000595083 291 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 AC068790.3-201ENST00000602988 553 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 AL355802.3-201ENST00000607571 545 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.56□□□□□ -1.84
EBF3Q9H4W6 AC104237.2-201ENST00000612456 443 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 AC091925.2-201ENST00000625059 256 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.56□□□□□ -1.84
EBF3Q9H4W6 MIR7153-201ENST00000637758 57 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.56□□□□□ -1.84
EBF3Q9H4W6 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
EBF3Q9H4W6 AL513302.2-201ENST00000562313 1842 ntBASIC3.56□□□□□ -1.84
EBF3Q9H4W6 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
EBF3Q9H4W6 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
EBF3Q9H4W6 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.56□□□□□ -1.84
EBF3Q9H4W6 ASNSP3-201ENST00000451989 1306 ntBASIC3.55□□□□□ -1.84
EBF3Q9H4W6 RNU6-254P-201ENST00000363377 107 ntBASIC3.55□□□□□ -1.84
EBF3Q9H4W6 RNU6-1097P-201ENST00000363586 107 ntBASIC3.55□□□□□ -1.84
EBF3Q9H4W6 Y_RNA.259-201ENST00000364619 101 ntBASIC3.55□□□□□ -1.84
EBF3Q9H4W6 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
EBF3Q9H4W6 RNU6-356P-201ENST00000384140 107 ntBASIC3.55□□□□□ -1.84
EBF3Q9H4W6 SNORD116-29-201ENST00000384516 83 ntBASIC3.55□□□□□ -1.84
EBF3Q9H4W6 MIR559-201ENST00000385188 96 ntBASIC3.55□□□□□ -1.84
EBF3Q9H4W6 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
EBF3Q9H4W6 U3.39-201ENST00000408569 239 ntBASIC3.55□□□□□ -1.84
EBF3Q9H4W6 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.55□□□□□ -1.84
EBF3Q9H4W6 AC119618.1-201ENST00000434191 222 ntBASIC3.55□□□□□ -1.84
EBF3Q9H4W6 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.55□□□□□ -1.84
EBF3Q9H4W6 CEACAMP4-201ENST00000457676 421 ntBASIC3.55□□□□□ -1.84
EBF3Q9H4W6 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.55□□□□□ -1.84
EBF3Q9H4W6 RN7SL442P-201ENST00000473804 320 ntBASIC3.55□□□□□ -1.84
EBF3Q9H4W6 AC078785.3-201ENST00000476607 425 ntBASIC3.55□□□□□ -1.84
EBF3Q9H4W6 RPS4XP22-201ENST00000480755 780 ntBASIC3.55□□□□□ -1.84
EBF3Q9H4W6 AL163973.1-201ENST00000484753 577 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms