Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 AC009901.1-201ENST00000506703 541 ntBASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 RBBP4P6-201ENST00000508098 202 ntBASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 RNU6-572P-201ENST00000516724 80 ntBASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 AC103843.2-201ENST00000530523 682 ntBASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 MTCYBP33-201ENST00000575007 1130 ntBASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 AC008521.1-201ENST00000587471 187 ntBASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 AC024220.1-201ENST00000603675 484 ntBASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 AC126118.1-201ENST00000607744 628 ntBASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 AC104073.3-201ENST00000610942 955 ntBASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 AC012314.7-201ENST00000619693 93 ntBASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 SEPT14P19-203ENST00000633205 211 ntBASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 AL049781.1-201ENST00000623195 3585 ntBASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 SNORA63.1-201ENST00000362493 131 ntBASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 RNU4-35P-201ENST00000362588 141 ntBASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 Y_RNA.194-201ENST00000363985 102 ntBASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 OR5H15-201ENST00000383696 930 ntBASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 SNORD21-201ENST00000383953 95 ntBASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 UBE2V1P2-201ENST00000397758 440 ntBASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 AL356057.2-201ENST00000403318 432 ntBASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 RPL5P18-201ENST00000406671 891 ntBASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 AC023141.4-201ENST00000412031 328 ntBASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 ZNF885P-201ENST00000420174 1098 ntBASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 AL358075.3-201ENST00000426289 226 ntBASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 AC007560.1-201ENST00000426912 237 ntBASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 AC073464.1-201ENST00000429823 534 ntBASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 AC073063.1-201ENST00000434352 607 ntBASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 TPT1P7-201ENST00000458300 517 ntBASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 AC104806.1-201ENST00000508720 308 ntBASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 IGKV2-26-201ENST00000518305 343 ntBASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 AC104027.1-201ENST00000521887 300 ntBASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 OR5B10P-201ENST00000532869 642 ntBASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 AC136475.10-201ENST00000620253 385 ntBASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 AC004972.1-201ENST00000623934 2209 ntBASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HERPUD2Q9BSE4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 RNU6-1287P-201ENST00000362914 107 ntBASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 RNU4-24P-201ENST00000364565 139 ntBASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 Y_RNA.436-201ENST00000384097 102 ntBASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 RNU6-1060P-201ENST00000384664 107 ntBASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 Y_RNA.576-201ENST00000384781 102 ntBASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 AC126124.2-201ENST00000413542 321 ntBASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 AC003071.1-201ENST00000451219 789 ntBASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 ELOCP23-201ENST00000452014 332 ntBASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 MTCO3P7-201ENST00000510008 774 ntBASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 RNU1-143P-201ENST00000516296 146 ntBASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 SNORA31.19-201ENST00000517079 126 ntBASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 AC107934.2-201ENST00000518653 310 ntBASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 AC009902.1-201ENST00000519351 183 ntBASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 NDUFA8P1-201ENST00000605525 367 ntBASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 AC008536.2-201ENST00000607284 349 ntBASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 AC103591.3-201ENST00000608684 209 ntBASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 U1.23-201ENST00000610293 146 ntBASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 RNU1-68P-201ENST00000615382 146 ntBASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 U1.39-201ENST00000621562 146 ntBASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 AC068137.4-201ENST00000638485 296 ntBASIC3.5□□□□□ -1.85
HERPUD2Q9BSE4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms