Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 MTCYBP38-201ENST00000417160 1123 ntBASIC2.15□□□□□ -2.07
CDX2Q99626 AL365496.1-201ENST00000426885 215 ntBASIC2.15□□□□□ -2.07
CDX2Q99626 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.15□□□□□ -2.07
CDX2Q99626 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.15□□□□□ -2.07
CDX2Q99626 MTND1P31-201ENST00000449206 961 ntBASIC2.15□□□□□ -2.07
CDX2Q99626 AC027673.1-201ENST00000456245 405 ntBASIC2.15□□□□□ -2.07
CDX2Q99626 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.15□□□□□ -2.07
CDX2Q99626 RPS15AP34-201ENST00000487776 387 ntBASIC2.15□□□□□ -2.07
CDX2Q99626 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.15□□□□□ -2.07
CDX2Q99626 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.15□□□□□ -2.07
CDX2Q99626 TTC39CP1-201ENST00000512513 755 ntBASIC2.15□□□□□ -2.07
CDX2Q99626 RNA5SP471-201ENST00000516971 106 ntBASIC2.15□□□□□ -2.07
CDX2Q99626 RNU1-104P-201ENST00000517280 175 ntBASIC2.15□□□□□ -2.07
CDX2Q99626 AC025881.1-201ENST00000518851 512 ntBASIC2.15□□□□□ -2.07
CDX2Q99626 IGLV3-17-201ENST00000519099 244 ntBASIC2.15□□□□□ -2.07
CDX2Q99626 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.15□□□□□ -2.07
CDX2Q99626 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.15□□□□□ -2.07
CDX2Q99626 OR6C7P-201ENST00000547875 934 ntBASIC2.15□□□□□ -2.07
CDX2Q99626 PSMA3P-201ENST00000555485 635 ntBASIC2.15□□□□□ -2.07
CDX2Q99626 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.15□□□□□ -2.07
CDX2Q99626 AL512347.1-201ENST00000566420 503 ntBASIC2.15□□□□□ -2.07
CDX2Q99626 MYL12BP1-201ENST00000569826 507 ntBASIC2.15□□□□□ -2.07
CDX2Q99626 MIR4303-201ENST00000581299 66 ntBASIC2.15□□□□□ -2.07
CDX2Q99626 AC002984.1-201ENST00000591692 448 ntBASIC2.15□□□□□ -2.07
CDX2Q99626 AC021749.1-201ENST00000604322 607 ntBASIC2.15□□□□□ -2.07
CDX2Q99626 AL136363.1-201ENST00000605349 337 ntBASIC2.15□□□□□ -2.07
CDX2Q99626 AC103710.4-201ENST00000609301 899 ntBASIC2.15□□□□□ -2.07
CDX2Q99626 AC034102.8-201ENST00000615146 484 ntBASIC2.15□□□□□ -2.07
CDX2Q99626 AC068880.5-201ENST00000624331 290 ntBASIC2.15□□□□□ -2.07
CDX2Q99626 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.15□□□□□ -2.07
CDX2Q99626 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CDX2Q99626 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.14□□□□□ -2.07
CDX2Q99626 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.14□□□□□ -2.07
CDX2Q99626 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.14□□□□□ -2.07
CDX2Q99626 SNORA72.3-201ENST00000365074 132 ntBASIC2.14□□□□□ -2.07
CDX2Q99626 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CDX2Q99626 MIR1284-201ENST00000408337 120 ntBASIC2.14□□□□□ -2.07
CDX2Q99626 TPMTP3-201ENST00000411928 735 ntBASIC2.14□□□□□ -2.07
CDX2Q99626 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.14□□□□□ -2.07
CDX2Q99626 BX119904.4-201ENST00000424402 301 ntBASIC2.14□□□□□ -2.07
CDX2Q99626 MTCO2P20-201ENST00000437339 673 ntBASIC2.14□□□□□ -2.07
CDX2Q99626 AL714022.1-201ENST00000439897 151 ntBASIC2.14□□□□□ -2.07
CDX2Q99626 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.14□□□□□ -2.07
CDX2Q99626 EEF1A1P39-201ENST00000440791 250 ntBASIC2.14□□□□□ -2.07
CDX2Q99626 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.14□□□□□ -2.07
CDX2Q99626 AL592447.1-201ENST00000447592 540 ntBASIC2.14□□□□□ -2.07
CDX2Q99626 AL031313.1-201ENST00000448435 256 ntBASIC2.14□□□□□ -2.07
CDX2Q99626 AL118520.1-201ENST00000450770 291 ntBASIC2.14□□□□□ -2.07
CDX2Q99626 RPL21P134-201ENST00000453468 483 ntBASIC2.14□□□□□ -2.07
CDX2Q99626 USP9YP10-201ENST00000454868 628 ntBASIC2.14□□□□□ -2.07
CDX2Q99626 snoU109.3-201ENST00000459477 145 ntBASIC2.14□□□□□ -2.07
CDX2Q99626 AC080013.2-201ENST00000460866 323 ntBASIC2.14□□□□□ -2.07
CDX2Q99626 AC116337.2-201ENST00000477662 156 ntBASIC2.14□□□□□ -2.07
CDX2Q99626 HMGB1P36-201ENST00000487709 576 ntBASIC2.14□□□□□ -2.07
CDX2Q99626 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.14□□□□□ -2.07
CDX2Q99626 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.14□□□□□ -2.07
CDX2Q99626 AC021451.1-201ENST00000523498 1129 ntBASIC2.14□□□□□ -2.07
CDX2Q99626 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.14□□□□□ -2.07
CDX2Q99626 RPS3AP4-201ENST00000555161 764 ntBASIC2.14□□□□□ -2.07
CDX2Q99626 AC090888.2-201ENST00000559765 1144 ntBASIC2.14□□□□□ -2.07
CDX2Q99626 AC023813.2-201ENST00000564321 469 ntBASIC2.14□□□□□ -2.07
CDX2Q99626 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.14□□□□□ -2.07
CDX2Q99626 MTATP6P24-201ENST00000576835 677 ntBASIC2.14□□□□□ -2.07
CDX2Q99626 AL356575.1-201ENST00000603008 283 ntBASIC2.14□□□□□ -2.07
CDX2Q99626 AL078603.1-201ENST00000603824 313 ntBASIC2.14□□□□□ -2.07
CDX2Q99626 AL158211.4-201ENST00000606988 584 ntBASIC2.14□□□□□ -2.07
CDX2Q99626 AC004067.1-201ENST00000608733 700 ntBASIC2.14□□□□□ -2.07
CDX2Q99626 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.14□□□□□ -2.07
CDX2Q99626 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.14□□□□□ -2.07
CDX2Q99626 AL603758.1-201ENST00000618654 241 ntBASIC2.14□□□□□ -2.07
CDX2Q99626 AC109809.1-201ENST00000619665 545 ntBASIC2.14□□□□□ -2.07
CDX2Q99626 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.14□□□□□ -2.07
CDX2Q99626 AC093591.3-201ENST00000634516 308 ntBASIC2.14□□□□□ -2.07
CDX2Q99626 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.14□□□□□ -2.07
CDX2Q99626 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CDX2Q99626 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CDX2Q99626 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CDX2Q99626 AC092447.10-201ENST00000620607 1652 ntBASIC2.13□□□□□ -2.07
CDX2Q99626 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CDX2Q99626 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CDX2Q99626 Y_RNA.191-201ENST00000363972 113 ntBASIC2.13□□□□□ -2.07
CDX2Q99626 SNORA67.1-201ENST00000364749 141 ntBASIC2.13□□□□□ -2.07
CDX2Q99626 TAS2R15P-201ENST00000390674 928 ntBASIC2.13□□□□□ -2.07
CDX2Q99626 AL627390.1-201ENST00000396055 340 ntBASIC2.13□□□□□ -2.07
CDX2Q99626 MTCO2P8-201ENST00000412213 658 ntBASIC2.13□□□□□ -2.07
CDX2Q99626 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.13□□□□□ -2.07
CDX2Q99626 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.13□□□□□ -2.07
CDX2Q99626 MTATP6P17-201ENST00000431030 672 ntBASIC2.13□□□□□ -2.07
CDX2Q99626 AC092573.2-201ENST00000434546 243 ntBASIC2.13□□□□□ -2.07
CDX2Q99626 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.13□□□□□ -2.07
CDX2Q99626 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.13□□□□□ -2.07
CDX2Q99626 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.13□□□□□ -2.07
CDX2Q99626 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.13□□□□□ -2.07
CDX2Q99626 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.13□□□□□ -2.07
CDX2Q99626 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.13□□□□□ -2.07
CDX2Q99626 AC073901.1-201ENST00000462471 408 ntBASIC2.13□□□□□ -2.07
CDX2Q99626 AC108729.1-201ENST00000487812 947 ntBASIC2.13□□□□□ -2.07
CDX2Q99626 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.13□□□□□ -2.07
CDX2Q99626 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.13□□□□□ -2.07
CDX2Q99626 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms