Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC130650.2-201ENST00000618736 2403 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 AC097714.1-201ENST00000511272 1647 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 AC106871.1-201ENST00000568324 3102 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 Y_RNA.26-201ENST00000362539 101 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 Y_RNA.60-201ENST00000362831 98 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU6-1059P-201ENST00000363752 98 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 Y_RNA.210-201ENST00000364161 110 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU6-213P-201ENST00000384051 104 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 Y_RNA.477-201ENST00000384352 108 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 SNORA37-201ENST00000384504 129 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 SNORA19-201ENST00000384737 128 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 MIR3074-201ENST00000384885 81 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 AL360182.1-201ENST00000397433 468 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 AC243428.1-201ENST00000421099 264 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 RPL7P37-201ENST00000425095 738 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 RPL7P46-201ENST00000425129 740 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 AC108734.1-201ENST00000439549 399 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 RPS15AP27-201ENST00000449183 343 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 SCARNA18-201ENST00000459004 134 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 AC093767.1-201ENST00000504523 156 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 AC022493.2-201ENST00000506122 481 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 RBBP4P6-201ENST00000508098 202 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 AC104806.1-201ENST00000508720 308 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 SCARNA16.2-201ENST00000516520 172 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 RNA5SP179-201ENST00000517284 121 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 AC131281.1-201ENST00000522984 164 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 AC011979.2-201ENST00000527568 352 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 CYCSP30-201ENST00000546447 172 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 AC106785.1-201ENST00000565935 262 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 MIR3128-201ENST00000581957 66 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 IGHV3-29-201ENST00000604817 344 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 PISRT1.1-201ENST00000616930 107 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 ZNF33CP-201ENST00000432492 2030 ntBASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 AL138713.1-201ENST00000624026 2130 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU6-562P-201ENST00000362731 107 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU6-1287P-201ENST00000362914 107 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU6-1060P-201ENST00000384664 107 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 Y_RNA.556-201ENST00000384677 113 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 MT-TW-201ENST00000387382 68 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 AL391417.1-201ENST00000404100 426 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 BX682237.1-201ENST00000415016 335 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 AL353752.1-201ENST00000454946 260 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 DYNLL1P5-201ENST00000467158 270 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 AC092451.1-201ENST00000480211 153 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 RPS26P15-201ENST00000488067 348 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 AC005726.1-201ENST00000494679 427 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 AL139099.1-201ENST00000497398 403 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 AC020593.1-201ENST00000507399 299 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 AC116337.1-201ENST00000509680 687 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU6-408P-201ENST00000515910 100 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU6-189P-201ENST00000516120 101 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU6-406P-201ENST00000516470 107 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU4-77P-201ENST00000516692 156 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 FAM60DP-201ENST00000524174 632 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 AL133271.1-201ENST00000538229 291 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 AC107016.1-201ENST00000550463 337 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 MIR4504-201ENST00000577413 92 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 COX6CP3-201ENST00000580869 223 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 AC091167.4-201ENST00000605079 184 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms