Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 RNU1-73P-201ENST00000383971 164 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 RNU6-1029P-201ENST00000384109 107 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 Y_RNA.481-201ENST00000384373 102 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
NR1H4Q96RI1 MTCO3P40-201ENST00000392516 676 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 UBE2V1P2-201ENST00000397758 440 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 RPS4XP8-201ENST00000402039 771 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 RNA5SP317-201ENST00000410176 116 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 RNA5SP311-201ENST00000411290 116 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.18□□□□□ -1.9
NR1H4Q96RI1 AC063979.1-201ENST00000415539 377 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 AC245054.2-201ENST00000415639 319 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.18□□□□□ -1.9
NR1H4Q96RI1 AL158156.1-201ENST00000422509 473 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 AL160275.3-201ENST00000423876 471 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.18□□□□□ -1.9
NR1H4Q96RI1 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.18□□□□□ -1.9
NR1H4Q96RI1 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.18□□□□□ -1.9
NR1H4Q96RI1 AL117339.2-201ENST00000430475 180 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 MTND3P21-201ENST00000433774 331 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.18□□□□□ -1.9
NR1H4Q96RI1 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 RPS15AP9-201ENST00000439856 381 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 AL714022.1-201ENST00000439897 151 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.18□□□□□ -1.9
NR1H4Q96RI1 RPL21P133-201ENST00000443666 476 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 AC115115.1-201ENST00000449927 248 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.18□□□□□ -1.9
NR1H4Q96RI1 ELOCP23-201ENST00000452014 332 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.18□□□□□ -1.9
NR1H4Q96RI1 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.18□□□□□ -1.9
NR1H4Q96RI1 AC105417.1-201ENST00000514691 285 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 RNA5SP315-201ENST00000516340 116 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 RNA5SP312-201ENST00000517068 116 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 RNU6-685P-201ENST00000517088 95 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.18□□□□□ -1.9
NR1H4Q96RI1 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.18□□□□□ -1.9
NR1H4Q96RI1 AP001893.2-201ENST00000526949 202 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.18□□□□□ -1.9
NR1H4Q96RI1 EIF1P4-201ENST00000572664 335 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 MIR4775-201ENST00000581168 75 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 MTND4LP5-201ENST00000605152 292 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.18□□□□□ -1.9
NR1H4Q96RI1 AC006338.2-201ENST00000616864 791 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 AC011155.2-201ENST00000623202 216 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 U6.99-201ENST00000637524 83 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NR1H4Q96RI1 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NR1H4Q96RI1 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.18□□□□□ -1.9
NR1H4Q96RI1 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.18□□□□□ -1.9
NR1H4Q96RI1 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NR1H4Q96RI1 ZNF285B-201ENST00000561698 1767 ntBASIC3.17□□□□□ -1.9
NR1H4Q96RI1 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.17□□□□□ -1.9
NR1H4Q96RI1 MIR372-201ENST00000362225 67 ntBASIC3.17□□□□□ -1.9
NR1H4Q96RI1 RNU6-1085P-201ENST00000363576 107 ntBASIC3.17□□□□□ -1.9
NR1H4Q96RI1 SNORA62-201ENST00000365493 153 ntBASIC3.17□□□□□ -1.9
NR1H4Q96RI1 RNU6-658P-201ENST00000384606 106 ntBASIC3.17□□□□□ -1.9
NR1H4Q96RI1 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NR1H4Q96RI1 RN7SKP156-201ENST00000410308 342 ntBASIC3.17□□□□□ -1.9
NR1H4Q96RI1 RNA5SP44-201ENST00000410446 133 ntBASIC3.17□□□□□ -1.9
NR1H4Q96RI1 RNU6-1025P-201ENST00000410629 104 ntBASIC3.17□□□□□ -1.9
NR1H4Q96RI1 OR6C66P-201ENST00000414917 930 ntBASIC3.17□□□□□ -1.9
NR1H4Q96RI1 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NR1H4Q96RI1 AL353729.1-201ENST00000425044 720 ntBASIC3.17□□□□□ -1.9
NR1H4Q96RI1 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.17□□□□□ -1.9
NR1H4Q96RI1 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.17□□□□□ -1.9
NR1H4Q96RI1 AL596276.1-201ENST00000434465 418 ntBASIC3.17□□□□□ -1.9
NR1H4Q96RI1 OR4C10P-201ENST00000434991 931 ntBASIC3.17□□□□□ -1.9
NR1H4Q96RI1 H2AFZP6-201ENST00000444403 394 ntBASIC3.17□□□□□ -1.9
NR1H4Q96RI1 AC104058.1-201ENST00000448028 297 ntBASIC3.17□□□□□ -1.9
NR1H4Q96RI1 AC003071.1-201ENST00000451219 789 ntBASIC3.17□□□□□ -1.9
NR1H4Q96RI1 AL590639.1-201ENST00000456484 337 ntBASIC3.17□□□□□ -1.9
NR1H4Q96RI1 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.17□□□□□ -1.9
NR1H4Q96RI1 RN7SL323P-201ENST00000494712 295 ntBASIC3.17□□□□□ -1.9
NR1H4Q96RI1 AC026801.1-201ENST00000497178 464 ntBASIC3.17□□□□□ -1.9
NR1H4Q96RI1 SUMO2P6-201ENST00000505273 288 ntBASIC3.17□□□□□ -1.9
NR1H4Q96RI1 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.17□□□□□ -1.9
NR1H4Q96RI1 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.17□□□□□ -1.9
NR1H4Q96RI1 AC002456.2-201ENST00000509356 380 ntBASIC3.17□□□□□ -1.9
NR1H4Q96RI1 AC098591.2-201ENST00000510152 315 ntBASIC3.17□□□□□ -1.9
NR1H4Q96RI1 MTCO1P35-201ENST00000515270 228 ntBASIC3.17□□□□□ -1.9
NR1H4Q96RI1 RNU6-506P-201ENST00000516553 94 ntBASIC3.17□□□□□ -1.9
NR1H4Q96RI1 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.17□□□□□ -1.9
NR1H4Q96RI1 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NR1H4Q96RI1 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.17□□□□□ -1.9
NR1H4Q96RI1 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.17□□□□□ -1.9
NR1H4Q96RI1 H3F3AP1-201ENST00000559984 334 ntBASIC3.17□□□□□ -1.9
NR1H4Q96RI1 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.17□□□□□ -1.9
NR1H4Q96RI1 AC126118.1-201ENST00000607744 628 ntBASIC3.17□□□□□ -1.9
NR1H4Q96RI1 AL591516.1-201ENST00000611326 274 ntBASIC3.17□□□□□ -1.9
NR1H4Q96RI1 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NR1H4Q96RI1 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NR1H4Q96RI1 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.17□□□□□ -1.9
NR1H4Q96RI1 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NR1H4Q96RI1 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.16□□□□□ -1.9
NR1H4Q96RI1 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
NR1H4Q96RI1 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
NR1H4Q96RI1 RNA5SP283-201ENST00000365604 119 ntBASIC3.16□□□□□ -1.9
NR1H4Q96RI1 RNU6-116P-201ENST00000384042 109 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms