Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SNX18Q96RF0 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
SNX18Q96RF0 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
SNX18Q96RF0 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.56□□□□□ -1.84
SNX18Q96RF0 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SNX18Q96RF0 AC006504.1-201ENST00000562493 3666 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SNX18Q96RF0 CEP170P1-201ENST00000502249 4587 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
SNX18Q96RF0 ZNF826P-207ENST00000622273 1910 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 RNU6-82P-201ENST00000363970 107 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 RNA5SP130-201ENST00000364431 114 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 SNORA7.2-201ENST00000364446 145 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 AL359837.1-201ENST00000381357 287 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 Y_RNA.387-201ENST00000383918 102 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SNX18Q96RF0 SNORD70.1-201ENST00000391007 85 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 PPIAP31-201ENST00000405422 495 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 HSPE1P8-201ENST00000406997 288 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 MIR1302-11-201ENST00000408051 138 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 MIR1302-9-201ENST00000408365 138 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 MIR1302-10-201ENST00000408734 138 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 MTCO2P12-201ENST00000427426 682 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.55□□□□□ -1.84
SNX18Q96RF0 AC005019.1-201ENST00000436455 431 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 RPS29P31-201ENST00000446147 164 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.55□□□□□ -1.84
SNX18Q96RF0 AP001086.1-201ENST00000494882 321 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.55□□□□□ -1.84
SNX18Q96RF0 TBCAP3-201ENST00000512475 312 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 AC026726.1-201ENST00000512859 601 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 RNU6-189P-201ENST00000516120 101 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 SCARNA15.1-201ENST00000516384 125 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 RNU6-1088P-201ENST00000516850 104 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 AC090136.1-201ENST00000520009 240 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.55□□□□□ -1.84
SNX18Q96RF0 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.55□□□□□ -1.84
SNX18Q96RF0 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.55□□□□□ -1.84
SNX18Q96RF0 AC093227.2-201ENST00000589357 285 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.55□□□□□ -1.84
SNX18Q96RF0 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.55□□□□□ -1.84
SNX18Q96RF0 MIR1302-2-201ENST00000607096 138 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 AC009570.1-201ENST00000609599 745 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 MIR6867-201ENST00000610636 67 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 AL355810.1-201ENST00000614629 552 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 AL591424.2-201ENST00000617023 128 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 MTND5P42-201ENST00000637720 498 ntBASIC3.55□□□□□ -1.84
SNX18Q96RF0 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SNX18Q96RF0 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SNX18Q96RF0 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
SNX18Q96RF0 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.55□□□□□ -1.84
SNX18Q96RF0 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
SNX18Q96RF0 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SNX18Q96RF0 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.54□□□□□ -1.84
SNX18Q96RF0 OR4G2P-202ENST00000641004 1759 ntBASIC3.54□□□□□ -1.84
SNX18Q96RF0 SNORD113-7-201ENST00000363762 77 ntBASIC3.54□□□□□ -1.84
SNX18Q96RF0 Y_RNA.431-201ENST00000384086 102 ntBASIC3.54□□□□□ -1.84
SNX18Q96RF0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SNX18Q96RF0 RNU6-817P-201ENST00000391083 104 ntBASIC3.54□□□□□ -1.84
SNX18Q96RF0 SNORA48.7-201ENST00000391302 135 ntBASIC3.54□□□□□ -1.84
SNX18Q96RF0 HLFP1-201ENST00000402375 499 ntBASIC3.54□□□□□ -1.84
SNX18Q96RF0 RPL21P65-201ENST00000406094 466 ntBASIC3.54□□□□□ -1.84
SNX18Q96RF0 BX682237.1-201ENST00000415016 335 ntBASIC3.54□□□□□ -1.84
SNX18Q96RF0 AL356095.1-201ENST00000417217 199 ntBASIC3.54□□□□□ -1.84
SNX18Q96RF0 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.54□□□□□ -1.84
SNX18Q96RF0 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.54□□□□□ -1.84
SNX18Q96RF0 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.54□□□□□ -1.84
SNX18Q96RF0 TRBV1-201ENST00000476502 284 ntBASIC3.54□□□□□ -1.84
SNX18Q96RF0 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.54□□□□□ -1.84
SNX18Q96RF0 AC078918.1-201ENST00000498515 228 ntBASIC3.54□□□□□ -1.84
SNX18Q96RF0 PHBP14-201ENST00000512887 367 ntBASIC3.54□□□□□ -1.84
SNX18Q96RF0 SNORA31.3-201ENST00000516029 96 ntBASIC3.54□□□□□ -1.84
SNX18Q96RF0 AC093331.1-201ENST00000521474 169 ntBASIC3.54□□□□□ -1.84
SNX18Q96RF0 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.54□□□□□ -1.84
SNX18Q96RF0 AP005597.4-201ENST00000526762 229 ntBASIC3.54□□□□□ -1.84
SNX18Q96RF0 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SNX18Q96RF0 AP000889.2-201ENST00000532684 490 ntBASIC3.54□□□□□ -1.84
SNX18Q96RF0 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.54□□□□□ -1.84
SNX18Q96RF0 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.54□□□□□ -1.84
SNX18Q96RF0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.54□□□□□ -1.84
SNX18Q96RF0 MIR4286-201ENST00000580651 93 ntBASIC3.54□□□□□ -1.84
SNX18Q96RF0 POLR3GP2-201ENST00000588366 668 ntBASIC3.54□□□□□ -1.84
SNX18Q96RF0 ATP1B3P1-201ENST00000605365 821 ntBASIC3.54□□□□□ -1.84
SNX18Q96RF0 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.54□□□□□ -1.84
SNX18Q96RF0 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.54□□□□□ -1.84
SNX18Q96RF0 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.54□□□□□ -1.84
SNX18Q96RF0 U6.98-201ENST00000637157 84 ntBASIC3.54□□□□□ -1.84
SNX18Q96RF0 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SNX18Q96RF0 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.53□□□□□ -1.84
SNX18Q96RF0 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SNX18Q96RF0 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SNX18Q96RF0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.53□□□□□ -1.84
SNX18Q96RF0 SNORA63-201ENST00000363450 132 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 RNU6-715P-201ENST00000365204 103 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 RNU6-1227P-201ENST00000383981 107 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 MIR23B-201ENST00000384832 97 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 MIR514A1-201ENST00000385133 98 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 SNORA16.2-201ENST00000390991 127 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 EIF4E2P1-201ENST00000393781 255 ntBASIC3.53□□□□□ -1.84
SNX18Q96RF0 MIR548F5-201ENST00000408421 86 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms