Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 USP9YP17-201ENST00000444617 696 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 TPT1P14-201ENST00000448018 505 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 AP000542.1-201ENST00000448473 371 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.12□□□□□ -2.07
COL21A1Q96P44 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.12□□□□□ -2.07
COL21A1Q96P44 RPL37P6-201ENST00000460682 294 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 AC107626.1-201ENST00000471084 183 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 AC128713.1-201ENST00000471495 306 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 AC079804.2-201ENST00000490376 200 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 AC106872.3-201ENST00000495104 446 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 AC021146.8-201ENST00000507455 733 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 NDUFB4P2-201ENST00000509515 391 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 LTV1P1-201ENST00000510683 1237 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 MTATP6P9-201ENST00000515039 680 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 RNU5F-8P-201ENST00000515941 111 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 RNA5SP281-201ENST00000516504 135 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
COL21A1Q96P44 AC093012.1-202ENST00000549403 582 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.12□□□□□ -2.07
COL21A1Q96P44 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.12□□□□□ -2.07
COL21A1Q96P44 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.12□□□□□ -2.07
COL21A1Q96P44 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.12□□□□□ -2.07
COL21A1Q96P44 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.12□□□□□ -2.07
COL21A1Q96P44 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 VN1R82P-201ENST00000601481 356 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 AL356280.1-201ENST00000603614 379 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 AL355598.1-201ENST00000604169 202 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
COL21A1Q96P44 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.12□□□□□ -2.07
COL21A1Q96P44 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL21A1Q96P44 AP000776.1-201ENST00000530032 1663 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.11□□□□□ -2.07
COL21A1Q96P44 U8.2-201ENST00000363156 134 ntBASIC2.11□□□□□ -2.07
COL21A1Q96P44 XGY1-201ENST00000381172 446 ntBASIC2.11□□□□□ -2.07
COL21A1Q96P44 SNORA51.11-201ENST00000384442 131 ntBASIC2.11□□□□□ -2.07
COL21A1Q96P44 AL591416.1-201ENST00000404015 867 ntBASIC2.11□□□□□ -2.07
COL21A1Q96P44 AC023141.4-201ENST00000412031 328 ntBASIC2.11□□□□□ -2.07
COL21A1Q96P44 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.11□□□□□ -2.07
COL21A1Q96P44 MORF4L1P6-201ENST00000418771 268 ntBASIC2.11□□□□□ -2.07
COL21A1Q96P44 MTND2P9-201ENST00000422293 931 ntBASIC2.11□□□□□ -2.07
COL21A1Q96P44 ELOCP14-201ENST00000428070 331 ntBASIC2.11□□□□□ -2.07
COL21A1Q96P44 TXNL1P1-201ENST00000429528 554 ntBASIC2.11□□□□□ -2.07
COL21A1Q96P44 ELOCP7-201ENST00000439968 331 ntBASIC2.11□□□□□ -2.07
COL21A1Q96P44 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.11□□□□□ -2.07
COL21A1Q96P44 ELOCP30-201ENST00000447108 299 ntBASIC2.11□□□□□ -2.07
COL21A1Q96P44 DPPA3P1-201ENST00000448050 469 ntBASIC2.11□□□□□ -2.07
COL21A1Q96P44 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.11□□□□□ -2.07
COL21A1Q96P44 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.11□□□□□ -2.07
COL21A1Q96P44 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.11□□□□□ -2.07
COL21A1Q96P44 AC134050.1-201ENST00000495088 933 ntBASIC2.11□□□□□ -2.07
COL21A1Q96P44 GZMAP1-201ENST00000503054 631 ntBASIC2.11□□□□□ -2.07
COL21A1Q96P44 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.11□□□□□ -2.07
COL21A1Q96P44 HMGB3P3-201ENST00000510526 400 ntBASIC2.11□□□□□ -2.07
COL21A1Q96P44 SNORD19.2-201ENST00000516978 73 ntBASIC2.11□□□□□ -2.07
COL21A1Q96P44 MTCYBP20-201ENST00000524239 1129 ntBASIC2.11□□□□□ -2.07
COL21A1Q96P44 AP000873.5-201ENST00000533906 236 ntBASIC2.11□□□□□ -2.07
COL21A1Q96P44 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.11□□□□□ -2.07
COL21A1Q96P44 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.11□□□□□ -2.07
COL21A1Q96P44 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.11□□□□□ -2.07
COL21A1Q96P44 AL133153.1-201ENST00000557756 303 ntBASIC2.11□□□□□ -2.07
COL21A1Q96P44 AC023813.2-201ENST00000564321 469 ntBASIC2.11□□□□□ -2.07
COL21A1Q96P44 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.11□□□□□ -2.07
COL21A1Q96P44 MIR3117-201ENST00000584034 78 ntBASIC2.11□□□□□ -2.07
COL21A1Q96P44 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.11□□□□□ -2.07
COL21A1Q96P44 AC013562.2-201ENST00000611632 603 ntBASIC2.11□□□□□ -2.07
COL21A1Q96P44 MIR6840-201ENST00000611937 71 ntBASIC2.11□□□□□ -2.07
COL21A1Q96P44 AP002791.1-201ENST00000623291 381 ntBASIC2.11□□□□□ -2.07
COL21A1Q96P44 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.11□□□□□ -2.07
COL21A1Q96P44 AC097655.1-201ENST00000635075 318 ntBASIC2.11□□□□□ -2.07
COL21A1Q96P44 AC099654.9-201ENST00000637055 678 ntBASIC2.11□□□□□ -2.07
COL21A1Q96P44 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
COL21A1Q96P44 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.11□□□□□ -2.07
COL21A1Q96P44 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
COL21A1Q96P44 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.1□□□□□ -2.07
COL21A1Q96P44 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
COL21A1Q96P44 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
COL21A1Q96P44 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
COL21A1Q96P44 RPL21P24-201ENST00000413752 448 ntBASIC2.1□□□□□ -2.07
COL21A1Q96P44 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
COL21A1Q96P44 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.1□□□□□ -2.07
COL21A1Q96P44 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.1□□□□□ -2.07
COL21A1Q96P44 BPY2DP-201ENST00000422208 265 ntBASIC2.1□□□□□ -2.07
COL21A1Q96P44 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.1□□□□□ -2.07
COL21A1Q96P44 AC244035.1-201ENST00000430042 390 ntBASIC2.1□□□□□ -2.07
COL21A1Q96P44 MED14P1-201ENST00000430517 648 ntBASIC2.1□□□□□ -2.07
COL21A1Q96P44 MICF-203ENST00000432679 129 ntBASIC2.1□□□□□ -2.07
COL21A1Q96P44 AC084290.1-201ENST00000434995 374 ntBASIC2.1□□□□□ -2.07
COL21A1Q96P44 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.1□□□□□ -2.07
COL21A1Q96P44 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.1□□□□□ -2.07
COL21A1Q96P44 RPL23AP41-201ENST00000484754 458 ntBASIC2.1□□□□□ -2.07
COL21A1Q96P44 AC090255.1-201ENST00000495779 349 ntBASIC2.1□□□□□ -2.07
COL21A1Q96P44 GTF2IP9-201ENST00000502460 301 ntBASIC2.1□□□□□ -2.07
COL21A1Q96P44 ANXA2P1-201ENST00000505539 926 ntBASIC2.1□□□□□ -2.07
COL21A1Q96P44 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.1□□□□□ -2.07
COL21A1Q96P44 RNA5SP471-201ENST00000516971 106 ntBASIC2.1□□□□□ -2.07
COL21A1Q96P44 RN7SKP258-201ENST00000517151 304 ntBASIC2.1□□□□□ -2.07
COL21A1Q96P44 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.1□□□□□ -2.07
COL21A1Q96P44 AC007151.1-201ENST00000572774 483 ntBASIC2.1□□□□□ -2.07
COL21A1Q96P44 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.1□□□□□ -2.07
COL21A1Q96P44 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms