Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AL118520.1-201ENST00000450770 291 ntBASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 ANKRD26P4-201ENST00000455755 950 ntBASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 AC008481.1-201ENST00000463278 396 ntBASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 AC034222.1-201ENST00000494052 532 ntBASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 AC134050.1-201ENST00000495088 933 ntBASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 AC023141.11-201ENST00000508864 202 ntBASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 AC093809.1-201ENST00000509155 340 ntBASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 MIR4648-201ENST00000580107 72 ntBASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 AP000403.1-201ENST00000603349 851 ntBASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 AC112220.3-201ENST00000605502 502 ntBASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 AC107294.1-201ENST00000609524 467 ntBASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 MIR6840-201ENST00000611937 71 ntBASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 AC025594.3-201ENST00000613068 790 ntBASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 MIR6873-201ENST00000622788 63 ntBASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 AC005858.4-201ENST00000623191 700 ntBASIC2.17□□□□□ -2.06
ECHDC3Q96DC8 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 AP000776.1-201ENST00000530032 1663 ntBASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 U8.2-201ENST00000363156 134 ntBASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 RNU6-853P-201ENST00000364306 107 ntBASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 AL355143.1-201ENST00000407101 841 ntBASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 MICF-203ENST00000432679 129 ntBASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 AC010153.1-201ENST00000432862 727 ntBASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 AC005410.1-202ENST00000460347 485 ntBASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 AC010631.1-201ENST00000474150 156 ntBASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 LTV1P1-201ENST00000510683 1237 ntBASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 MTND5P13-201ENST00000513046 1079 ntBASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 AC022447.1-201ENST00000515358 464 ntBASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 RNA5SP216-201ENST00000516111 123 ntBASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 RPS15AP11-201ENST00000594193 385 ntBASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 AC004805.2-201ENST00000605382 482 ntBASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 SNORD14A-201ENST00000606526 91 ntBASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.16□□□□□ -2.06
ECHDC3Q96DC8 MTND5P29-201ENST00000458676 1807 ntBASIC2.15□□□□□ -2.06
ECHDC3Q96DC8 AL596028.1-201ENST00000326971 197 ntBASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 RNU4-92P-201ENST00000363783 136 ntBASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 SNORA64-201ENST00000384674 134 ntBASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 MIR19A-201ENST00000384878 82 ntBASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 MIR122-201ENST00000385044 85 ntBASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 RNU6-220P-201ENST00000390919 107 ntBASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 SNORA11.4-201ENST00000408823 129 ntBASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 MTCO1P17-201ENST00000411522 491 ntBASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 AF274854.1-201ENST00000413236 615 ntBASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 AC005005.2-201ENST00000420779 380 ntBASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 AL445669.1-201ENST00000426743 755 ntBASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 HMGB1P9-201ENST00000429856 646 ntBASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 AC244035.1-201ENST00000430042 390 ntBASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 RPS29P21-201ENST00000496272 170 ntBASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 AC010587.2-201ENST00000511727 448 ntBASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 RNA5SP290-201ENST00000517133 127 ntBASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 RN7SKP258-201ENST00000517151 304 ntBASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 PRELID2P1-201ENST00000552837 301 ntBASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 AC009127.3-201ENST00000570531 403 ntBASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 AL391813.1-201ENST00000603098 260 ntBASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 AC025588.2-201ENST00000604851 466 ntBASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 AC012150.2-201ENST00000621300 544 ntBASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 AC097655.1-201ENST00000635075 318 ntBASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 AC010889.1-201ENST00000566193 2666 ntBASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 AC004520.1-201ENST00000608362 1413 ntBASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.07
ECHDC3Q96DC8 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 AC005336.3-201ENST00000623833 2679 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms