Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2□□□□□ -2.09
CPNE4Q96A23 GTF2IP9-201ENST00000502460 301 ntBASIC2□□□□□ -2.09
CPNE4Q96A23 AC104090.1-201ENST00000506341 1171 ntBASIC2□□□□□ -2.09
CPNE4Q96A23 AC022447.3-201ENST00000506865 495 ntBASIC2□□□□□ -2.09
CPNE4Q96A23 AC093809.1-201ENST00000509155 340 ntBASIC2□□□□□ -2.09
CPNE4Q96A23 RNA5SP200-201ENST00000516360 103 ntBASIC2□□□□□ -2.09
CPNE4Q96A23 RNU6-840P-201ENST00000517275 65 ntBASIC2□□□□□ -2.09
CPNE4Q96A23 CYCSP26-201ENST00000534107 320 ntBASIC2□□□□□ -2.09
CPNE4Q96A23 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2□□□□□ -2.09
CPNE4Q96A23 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
CPNE4Q96A23 AKIRIN1P1-201ENST00000547384 544 ntBASIC2□□□□□ -2.09
CPNE4Q96A23 RPP40P2-201ENST00000603596 712 ntBASIC2□□□□□ -2.09
CPNE4Q96A23 AL592221.1-201ENST00000605266 382 ntBASIC2□□□□□ -2.09
CPNE4Q96A23 AC106052.1-201ENST00000608029 497 ntBASIC2□□□□□ -2.09
CPNE4Q96A23 AC009831.4-201ENST00000620744 325 ntBASIC2□□□□□ -2.09
CPNE4Q96A23 MTND1P37-201ENST00000636562 264 ntBASIC2□□□□□ -2.09
CPNE4Q96A23 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2□□□□□ -2.09
CPNE4Q96A23 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CPNE4Q96A23 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
CPNE4Q96A23 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CPNE4Q96A23 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CPNE4Q96A23 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.99□□□□□ -2.09
CPNE4Q96A23 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
CPNE4Q96A23 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CPNE4Q96A23 SNORA16B-201ENST00000364674 135 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 RNU1-39P-201ENST00000383897 165 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 RNU6-636P-201ENST00000384598 107 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 MIR221-201ENST00000385135 110 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 SNORA46.1-201ENST00000391069 153 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 SNORA48.3-201ENST00000391081 134 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CPNE4Q96A23 SNORA3.2-201ENST00000408221 125 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.99□□□□□ -2.09
CPNE4Q96A23 AL451054.2-201ENST00000420896 202 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.99□□□□□ -2.09
CPNE4Q96A23 HMGB1P9-201ENST00000429856 646 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 HSFY7P-201ENST00000432672 318 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 AC084290.1-201ENST00000434995 374 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CPNE4Q96A23 HSFY8P-201ENST00000437934 318 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 RPL32P28-201ENST00000443577 397 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CPNE4Q96A23 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.99□□□□□ -2.09
CPNE4Q96A23 AP000542.1-201ENST00000448473 371 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 AL353705.4-201ENST00000449661 238 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.99□□□□□ -2.09
CPNE4Q96A23 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.99□□□□□ -2.09
CPNE4Q96A23 HSFY5P-201ENST00000453726 309 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 KLF3P2-201ENST00000465138 268 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 RPL7P18-201ENST00000478965 734 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.99□□□□□ -2.09
CPNE4Q96A23 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.99□□□□□ -2.09
CPNE4Q96A23 AC008549.1-201ENST00000512900 643 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.99□□□□□ -2.09
CPNE4Q96A23 HMGN1P28-201ENST00000521340 364 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.99□□□□□ -2.09
CPNE4Q96A23 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
CPNE4Q96A23 OR5AQ1P-201ENST00000527596 927 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 AC023538.1-201ENST00000534576 736 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 AC010186.2-204ENST00000537668 439 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 AC091544.4-201ENST00000555268 342 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.99□□□□□ -2.09
CPNE4Q96A23 TMF1P1-201ENST00000576058 373 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.99□□□□□ -2.09
CPNE4Q96A23 MIR1273D-201ENST00000577266 86 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 MIR3199-1-201ENST00000582434 88 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 AL139344.1-201ENST00000605228 195 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
CPNE4Q96A23 TUG1_2.1-201ENST00000614234 87 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 AC010608.3-201ENST00000625048 527 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 AP000553.5-201ENST00000641933 54 ntBASIC1.99□□□□□ -2.09
CPNE4Q96A23 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.99□□□□□ -2.09
CPNE4Q96A23 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.99□□□□□ -2.09
CPNE4Q96A23 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.98□□□□□ -2.09
CPNE4Q96A23 RNA5SP126-201ENST00000365092 109 ntBASIC1.98□□□□□ -2.09
CPNE4Q96A23 RNU6-1083P-201ENST00000384022 107 ntBASIC1.98□□□□□ -2.09
CPNE4Q96A23 RNU6-1242P-201ENST00000391052 103 ntBASIC1.98□□□□□ -2.09
CPNE4Q96A23 Z98742.3-201ENST00000418637 326 ntBASIC1.98□□□□□ -2.09
CPNE4Q96A23 AC083875.1-201ENST00000419509 405 ntBASIC1.98□□□□□ -2.09
CPNE4Q96A23 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.98□□□□□ -2.09
CPNE4Q96A23 UBE2D3P1-201ENST00000436669 444 ntBASIC1.98□□□□□ -2.09
CPNE4Q96A23 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.98□□□□□ -2.09
CPNE4Q96A23 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.98□□□□□ -2.09
CPNE4Q96A23 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.98□□□□□ -2.09
CPNE4Q96A23 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.98□□□□□ -2.09
CPNE4Q96A23 DYNLL1P5-201ENST00000467158 270 ntBASIC1.98□□□□□ -2.09
CPNE4Q96A23 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.98□□□□□ -2.09
CPNE4Q96A23 AC034222.1-201ENST00000494052 532 ntBASIC1.98□□□□□ -2.09
CPNE4Q96A23 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.98□□□□□ -2.09
CPNE4Q96A23 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.98□□□□□ -2.09
CPNE4Q96A23 RNA5SP291-201ENST00000517222 105 ntBASIC1.98□□□□□ -2.09
CPNE4Q96A23 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.98□□□□□ -2.09
CPNE4Q96A23 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.98□□□□□ -2.09
CPNE4Q96A23 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.98□□□□□ -2.09
CPNE4Q96A23 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.98□□□□□ -2.09
CPNE4Q96A23 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.98□□□□□ -2.09
CPNE4Q96A23 MTND4LP5-201ENST00000605152 292 ntBASIC1.98□□□□□ -2.09
CPNE4Q96A23 AL139022.2-201ENST00000606934 443 ntBASIC1.98□□□□□ -2.09
CPNE4Q96A23 AL133445.2-201ENST00000611191 527 ntBASIC1.98□□□□□ -2.09
CPNE4Q96A23 AC010133.1-201ENST00000615809 842 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms